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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1282012..1284159- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008211-T1 ID=KJC3_008211-T1|Name=KJC3_008211-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2148bp|location=Sequence derived from alignment at ch6:1282012..1284159- (Aspergillus niger KJC3)
GTTCTACGTATCTTCGTTCATCCTCAAATTCTCCCTACCAACACCCACGA
ACACCCCCTTATCTAACGTTGAATTACAGAGGCGGTCACATTACCTTCTA
TCTACAATGGTAGCCAAAAGGGCAAGGAACAAGACAAAGCACAAAGCAAA
TGATAAAGCAAAGGATAACGCAAAGGCTAAGGCAAAAGTACGTACACCGA
ACATGCGACATTATCTGTCCATCTCGGCCTACCTCCAATGGCACTCGAAA
TCTAACATCCAGAAGTTCTCTGCCCCTGATCGATCAGCATCTTCATCTTA
CAAGCCGTCCTCGGATGGGACACACAATGGAAACGACGAGGAACATCTAG
ACGCCGCCGAAATTCGGAGATCGCAGCGAATTCGAGTCAGGGAGGTTTCA
AAGACAGAAGTCCGTCATGGTACCAAATCTAAAGCCTTGCCAATGACATT
AGATAATGTCATGTCTGCGAAGGAACCGCCGCCGGAAGATACCCTGTCTC
CTGTCGAACAGCCACCAACTGATATCACCTCTCCTAAGGAACAGCGCACG
GACAATAACGAGTCTGTGGAGGAACCGATACCAGACGACGTCCAGTCTCA
TGGGAAACAGCCAGCGGATGACATACAGCCTCCTCGGGAACAACCACTCA
ATCAAAATGAATCTCTCGGAAAACAACCAACGGACAATAAAGAGCCCGTG
GAGGAACAGCGACCGAATGATATCACGTCTGTTGAGGAACTGCCACCAGA
TGATATGGAATCTCTGAGGGAACCGCACCAAAAGCTCAAGGAAAAAAAGT
ATCGAAACTCAGAGAAACAATGTCAAAAGCTGAACAGACGTTATCGAAAA
ATAAGCAAACAACAGCAGAAGATGAGCAAACAACATCTGAAGACGAATAA
ACAATATTTGAGGGAGAAAAGACAACATCAAAAGCTCAAAACTAGGCATC
GGTTGCTGAAAGATGAACACCATCTCAGTACAGAGCAATCCGCCACCCTG
AAGGAACAATGCCAGGAAATGAAGGCAAAATACCAAAAAATGAAGGAACG
TGTAGATTGGTTGGAGGGTTGGACAGCTGAGGCACTACACAAATACCATT
ATTTAGCCGCTGACCCTAGCGGCTGGGAATGCAGATCGCATGACTACTAC
GAGAAAGAGTTTTTCGGTCTATGGGCCCTCCTAAGGAATTGGGCAGAACG
CCACGCTCATGAGGAAACTACGGTCTTGGACAGTCTTCCCGCGAACTATA
AGAAAGATCTTGTCAAGAGCCTGGATGGCTATTGTGCTCAAATTGACCTG
GAAGAAATCCTTGGTGCTCTCGAACTAGGTGATATATTTGGAACGGAGAT
CGTGACTATGTTTCTTGTCAAGGACTGTATTGAACGGTTCTTTCTAAACC
CCTTCTGGTACATTGTGCCTCATCCAGGAGAAGGGACCGAGTATGACGAA
GAAGTTCTGCCAAGGGCTACTCGCTTCGGCACCGGACTTCATGAGCTACT
CAAAAAGTTCGACGCTGGTAAGAATCCCTCTCTTCAGTAGGCTGCGATTC
CGTAATGACTGACTCACTTTTTCAGATGGCAAAGAAGGGTTTCTAGCTCA
ATCATGGCGCCTATGGACGGCCCGCCTTTGCAGCACAAACGTCCGTGCTG
ATCAAAGCAGCTTCGCCAAGAGCATGATCACCCGCCGAAACCTCATGGTT
GAAGTTATGGTCAAACAAGTTATGGCTCACGAACTAGTAAAGCCCCTTCT
TAAAACTTCACCGGACGAGAAATCGGTTGCTATCATCGAGCGGAGTCTCA
CTAGAGCATATCAGCATGCCGCAGAGCTCTCTGTGAGGCTCTCAAAGGAC
GATCATTATGTAGTATTCCGCAACTTGCATGAGATTGGAGAAGTCTTCGA
TGAGTCGAACCCAGATATGGAGGCAGATTCTTCGCAAGCTTTCGATAGTG
ACCACCTTAATGGCCACCGGGTTATGAGCATGACGTATCCAGCAGTGTAC
TTTTGTGGGGGGTTTATCTCTCCAGACTATCGACAACGTATCGTTAAAGC
GAATGTTTTTGTGGAAGATAAGACAACAGTCACGATGACTGACTCTACCT
GAGAATGATAATTGCTTTCAAGGCAAATCTCCCCGCGCATGTTCTCAG back to topCoding sequence (CDS) from alignment at ch6:1282012..1284159- >KJC3_008211-T1 ID=KJC3_008211-T1|Name=KJC3_008211-T1|organism=Aspergillus niger KJC3|type=CDS|length=5580bp|location=Sequence derived from alignment at ch6:1282012..1284159- (Aspergillus niger KJC3)
ATGGCAAAGAAGGGTTTCTAGCTCAATCATGGCGCCTATGGACGGCCCGC
CTTTGCAGCACAAACGTCCGTGCTGATCAAAGCAGCTTCGCCAAGAGCAT
GATCACCCGCCGAAACCTCATGGTTGAAGTTATGGTCAAACAAGTTATGG
CTCACGAACTAGTAAAGCCCCTTCTTAAAACTTCACCGGACGAGAAATCG
GTTGCTATCATCGAGCGGAGTCTCACTAGAGCATATCAGCATGCCGCAGA
GCTCTCTGTGAGGCTCTCAAAGGACGATCATTATGTAGTATTCCGCAACT
TGCATGAGATTGGAGAAGTCTTCGATGAGTCGAACCCAGATATGGAGGCA
GATTCTTCGCAAGCTTTCGATAGTGACCACCTTAATGGCCACCGGGTTAT
GAGCATGACGTATCCAGCAGTGTACTTTTGTGGGGGGTTTATCTCTCCAG
ACTATCGACAACGTATCGTTAAAGCGAATGTTTTTGTGGAAGATAAGACA
ACAGTCACGATGACTGACTCTACCTGATTCTCTGCCCCTGATCGATCAGC
ATCTTCATCTTACAAGCCGTCCTCGGATGGGACACACAATGGAAACGACG
AGGAACATCTAGACGCCGCCGAAATTCGGAGATCGCAGCGAATTCGAGTC
AGGGAGGTTTCAAAGACAGAAGTCCGTCATGGTACCAAATCTAAAGCCTT
GCCAATGACATTAGATAATGTCATGTCTGCGAAGGAACCGCCGCCGGAAG
ATACCCTGTCTCCTGTCGAACAGCCACCAACTGATATCACCTCTCCTAAG
GAACAGCGCACGGACAATAACGAGTCTGTGGAGGAACCGATACCAGACGA
CGTCCAGTCTCATGGGAAACAGCCAGCGGATGACATACAGCCTCCTCGGG
AACAACCACTCAATCAAAATGAATCTCTCGGAAAACAACCAACGGACAAT
AAAGAGCCCGTGGAGGAACAGCGACCGAATGATATCACGTCTGTTGAGGA
ACTGCCACCAGATGATATGGAATCTCTGAGGGAACCGCACCAAAAGCTCA
AGGAAAAAAAGTATCGAAACTCAGAGAAACAATGTCAAAAGCTGAACAGA
CGTTATCGAAAAATAAGCAAACAACAGCAGAAGATGAGCAAACAACATCT
GAAGACGAATAAACAATATTTGAGGGAGAAAAGACAACATCAAAAGCTCA
AAACTAGGCATCGGTTGCTGAAAGATGAACACCATCTCAGTACAGAGCAA
TCCGCCACCCTGAAGGAACAATGCCAGGAAATGAAGGCAAAATACCAAAA
AATGAAGGAACGTGTAGATTGGTTGGAGGGTTGGACAGCTGAGGCACTAC
ACAAATACCATTATTTAGCCGCTGACCCTAGCGGCTGGGAATGCAGATCG
CATGACTACTACGAGAAAGAGTTTTTCGGTCTATGGGCCCTCCTAAGGAA
TTGGGCAGAACGCCACGCTCATGAGGAAACTACGGTCTTGGACAGTCTTC
CCGCGAACTATAAGAAAGATCTTGTCAAGAGCCTGGATGGCTATTGTGCT
CAAATTGACCTGGAAGAAATCCTTGGTGCTCTCGAACTAGGTGATATATT
TGGAACGGAGATCGTGACTATGTTTCTTGTCAAGGACTGTATTGAACGGT
TCTTTCTAAACCCCTTCTGGTACATTGTGCCTCATCCAGGAGAAGGGACC
GAGTATGACGAAGAAGTTCTGCCAAGGGCTACTCGCTTCGGCACCGGACT
TCATGAGCTACTCAAAAAGTTCGACGCTGATGGTAGCCAAAAGGGCAAGG
AACAAGACAAAGCACAAAGCAAATGATAAAGCAAAGGATAACGCAAAGGC
TAAGGCAAAAATGGCAAAGAAGGGTTTCTAGCTCAATCATGGCGCCTATG
GACGGCCCGCCTTTGCAGCACAAACGTCCGTGCTGATCAAAGCAGCTTCG
CCAAGAGCATGATCACCCGCCGAAACCTCATGGTTGAAGTTATGGTCAAA
CAAGTTATGGCTCACGAACTAGTAAAGCCCCTTCTTAAAACTTCACCGGA
CGAGAAATCGGTTGCTATCATCGAGCGGAGTCTCACTAGAGCATATCAGC
ATGCCGCAGAGCTCTCTGTGAGGCTCTCAAAGGACGATCATTATGTAGTA
TTCCGCAACTTGCATGAGATTGGAGAAGTCTTCGATGAGTCGAACCCAGA
TATGGAGGCAGATTCTTCGCAAGCTTTCGATAGTGACCACCTTAATGGCC
ACCGGGTTATGAGCATGACGTATCCAGCAGTGTACTTTTGTGGGGGGTTT
ATCTCTCCAGACTATCGACAACGTATCGTTAAAGCGAATGTTTTTGTGGA
AGATAAGACAACAGTCACGATGACTGACTCTACCTGATTCTCTGCCCCTG
ATCGATCAGCATCTTCATCTTACAAGCCGTCCTCGGATGGGACACACAAT
GGAAACGACGAGGAACATCTAGACGCCGCCGAAATTCGGAGATCGCAGCG
AATTCGAGTCAGGGAGGTTTCAAAGACAGAAGTCCGTCATGGTACCAAAT
CTAAAGCCTTGCCAATGACATTAGATAATGTCATGTCTGCGAAGGAACCG
CCGCCGGAAGATACCCTGTCTCCTGTCGAACAGCCACCAACTGATATCAC
CTCTCCTAAGGAACAGCGCACGGACAATAACGAGTCTGTGGAGGAACCGA
TACCAGACGACGTCCAGTCTCATGGGAAACAGCCAGCGGATGACATACAG
CCTCCTCGGGAACAACCACTCAATCAAAATGAATCTCTCGGAAAACAACC
AACGGACAATAAAGAGCCCGTGGAGGAACAGCGACCGAATGATATCACGT
CTGTTGAGGAACTGCCACCAGATGATATGGAATCTCTGAGGGAACCGCAC
CAAAAGCTCAAGGAAAAAAAGTATCGAAACTCAGAGAAACAATGTCAAAA
GCTGAACAGACGTTATCGAAAAATAAGCAAACAACAGCAGAAGATGAGCA
AACAACATCTGAAGACGAATAAACAATATTTGAGGGAGAAAAGACAACAT
CAAAAGCTCAAAACTAGGCATCGGTTGCTGAAAGATGAACACCATCTCAG
TACAGAGCAATCCGCCACCCTGAAGGAACAATGCCAGGAAATGAAGGCAA
AATACCAAAAAATGAAGGAACGTGTAGATTGGTTGGAGGGTTGGACAGCT
GAGGCACTACACAAATACCATTATTTAGCCGCTGACCCTAGCGGCTGGGA
ATGCAGATCGCATGACTACTACGAGAAAGAGTTTTTCGGTCTATGGGCCC
TCCTAAGGAATTGGGCAGAACGCCACGCTCATGAGGAAACTACGGTCTTG
GACAGTCTTCCCGCGAACTATAAGAAAGATCTTGTCAAGAGCCTGGATGG
CTATTGTGCTCAAATTGACCTGGAAGAAATCCTTGGTGCTCTCGAACTAG
GTGATATATTTGGAACGGAGATCGTGACTATGTTTCTTGTCAAGGACTGT
ATTGAACGGTTCTTTCTAAACCCCTTCTGGTACATTGTGCCTCATCCAGG
AGAAGGGACCGAGTATGACGAAGAAGTTCTGCCAAGGGCTACTCGCTTCG
GCACCGGACTTCATGAGCTACTCAAAAAGTTCGACGCTGATGGTAGCCAA
AAGGGCAAGGAACAAGACAAAGCACAAAGCAAATGATAAAGCAAAGGATA
ACGCAAAGGCTAAGGCAAAAATGGCAAAGAAGGGTTTCTAGCTCAATCAT
GGCGCCTATGGACGGCCCGCCTTTGCAGCACAAACGTCCGTGCTGATCAA
AGCAGCTTCGCCAAGAGCATGATCACCCGCCGAAACCTCATGGTTGAAGT
TATGGTCAAACAAGTTATGGCTCACGAACTAGTAAAGCCCCTTCTTAAAA
CTTCACCGGACGAGAAATCGGTTGCTATCATCGAGCGGAGTCTCACTAGA
GCATATCAGCATGCCGCAGAGCTCTCTGTGAGGCTCTCAAAGGACGATCA
TTATGTAGTATTCCGCAACTTGCATGAGATTGGAGAAGTCTTCGATGAGT
CGAACCCAGATATGGAGGCAGATTCTTCGCAAGCTTTCGATAGTGACCAC
CTTAATGGCCACCGGGTTATGAGCATGACGTATCCAGCAGTGTACTTTTG
TGGGGGGTTTATCTCTCCAGACTATCGACAACGTATCGTTAAAGCGAATG
TTTTTGTGGAAGATAAGACAACAGTCACGATGACTGACTCTACCTGATTC
TCTGCCCCTGATCGATCAGCATCTTCATCTTACAAGCCGTCCTCGGATGG
GACACACAATGGAAACGACGAGGAACATCTAGACGCCGCCGAAATTCGGA
GATCGCAGCGAATTCGAGTCAGGGAGGTTTCAAAGACAGAAGTCCGTCAT
GGTACCAAATCTAAAGCCTTGCCAATGACATTAGATAATGTCATGTCTGC
GAAGGAACCGCCGCCGGAAGATACCCTGTCTCCTGTCGAACAGCCACCAA
CTGATATCACCTCTCCTAAGGAACAGCGCACGGACAATAACGAGTCTGTG
GAGGAACCGATACCAGACGACGTCCAGTCTCATGGGAAACAGCCAGCGGA
TGACATACAGCCTCCTCGGGAACAACCACTCAATCAAAATGAATCTCTCG
GAAAACAACCAACGGACAATAAAGAGCCCGTGGAGGAACAGCGACCGAAT
GATATCACGTCTGTTGAGGAACTGCCACCAGATGATATGGAATCTCTGAG
GGAACCGCACCAAAAGCTCAAGGAAAAAAAGTATCGAAACTCAGAGAAAC
AATGTCAAAAGCTGAACAGACGTTATCGAAAAATAAGCAAACAACAGCAG
AAGATGAGCAAACAACATCTGAAGACGAATAAACAATATTTGAGGGAGAA
AAGACAACATCAAAAGCTCAAAACTAGGCATCGGTTGCTGAAAGATGAAC
ACCATCTCAGTACAGAGCAATCCGCCACCCTGAAGGAACAATGCCAGGAA
ATGAAGGCAAAATACCAAAAAATGAAGGAACGTGTAGATTGGTTGGAGGG
TTGGACAGCTGAGGCACTACACAAATACCATTATTTAGCCGCTGACCCTA
GCGGCTGGGAATGCAGATCGCATGACTACTACGAGAAAGAGTTTTTCGGT
CTATGGGCCCTCCTAAGGAATTGGGCAGAACGCCACGCTCATGAGGAAAC
TACGGTCTTGGACAGTCTTCCCGCGAACTATAAGAAAGATCTTGTCAAGA
GCCTGGATGGCTATTGTGCTCAAATTGACCTGGAAGAAATCCTTGGTGCT
CTCGAACTAGGTGATATATTTGGAACGGAGATCGTGACTATGTTTCTTGT
CAAGGACTGTATTGAACGGTTCTTTCTAAACCCCTTCTGGTACATTGTGC
CTCATCCAGGAGAAGGGACCGAGTATGACGAAGAAGTTCTGCCAAGGGCT
ACTCGCTTCGGCACCGGACTTCATGAGCTACTCAAAAAGTTCGACGCTGA
TGGTAGCCAAAAGGGCAAGGAACAAGACAAAGCACAAAGCAAATGATAAA
GCAAAGGATAACGCAAAGGCTAAGGCAAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008211-T1.utr3p1 | KJC3_008211-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008211-T1.utr5p1 | KJC3_008211-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.10 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1282012..1284159 - |
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