|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1289171..1292062+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008214-T2 ID=KJC3_008214-T2|Name=KJC3_008214-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2892bp|location=Sequence derived from alignment at ch6:1289171..1292062+ (Aspergillus niger KJC3)
CACCACCTCTTGATTGATTCACCACGCACTTGACTGCATCGGGCTGGCCT
GGACGGGCACGGTCCCTCCCTTCGGCTGCTTCCTGCACTCCCATCCGCTT
ACTCATGCAATTCATCGCTCAATGCAGTCCTGTTCTTCTGTGCAAAGGGG
GAGATCAAGGTGATGGATGAAAATGGAATGGAATGCAAGACGCAGCATGT
GAAAACTATCAATTGAGAATTCCATTCAAGCCCTTCAGTGATAAAACCAA
GTCACCAAGATGAATGTCCCACTCCGCTGTCCAAGATCACCAGACTTCCC
GACTAGGGAATTAGTGGAGCACGTGTGGTAAATTCTAGAACCCCAAGGCA
AAAGGGGGCAGCCGCACAAATATGTCCTGCCAGTGATGCCCTTAGGCATT
TTTCTTCTTTCTCTCCTCATTTTTCGTCGACCATGCACTGTGAGTTGGTT
TGTATTTCACGGGCATTGTGTGCATAGTACCGGCCATTGCAGTGGTGTGG
TGATCCATGCTCTGCTACTAAGCACCCCGGCCAGTTTCACTAGCAACAGA
GCACCAGACTCGGTGGAACACTGTGTCTGACTACGCATCGTAGACTGCTT
TGGATTTACAGGGTCTACATCTGACGGTGGTCTCAGTCGCACCGCTCCGA
CAAATGCTGTCTAAACTGCTCTACGACATTCAGGAGCTCCCGCCTGACCA
TCGCGTTGTCGCGGGACAGCGGCACCGACGCTTGCTCTATTACGTAGCCC
ATCTGGCATCATGGACCTCCAACCTTTATCTCGTCCTTCGCCTAGCTCTG
TGTTTCTCTGCTGTGCAACAAAATTGGCGAGCCTGGCTAACTCTGTTGGT
CGAGACCGTTCTCGCCAGTATGTCTATACCACCGTGAACTGCCGTGTTTC
GACACGCCGGCTCCCTTTTCGAGCAAACGAGGACGCGCAAGCTAATATGT
TTTCAGTCATTTGGCGTCATGATCAGCTTCTCACCATGTTAGGTGGTTCG
GCATCAGAGAGCCAACCACGCAAAAGACTGCGATTACACGGCACCGACGA
TCTACCGCAGGTGGACATTTTGGTGCCCTGCTGCGGAGAGCCTGTCGACG
TCATTTTGGACACCGTGCGTGCTGCCTGTACAATGGACTATCCAGTTTCC
AGCTTCCGGGTCCGTGTATTGGACGATGGTGCTTCCACAGAGCTCGAGTC
CGCCGTTGCAGCACTGCGCACTGAATGGCCTCACCTCTTCTACCACACGC
GCGGAAGGCAATCCGGTAAGGTCTTCGCCAAGGCTGGTAACATGAATTAC
GCCCTGTTCACCCTGCAAGAAAAGGCTCCACCTGAGTTTTGTGCCATCTT
CGATGCAGACTCCATCCCCATGCCTCACTTTCTGAGGGCGACGTTGCCCC
ATCTCCTTCAGACCCCGGAAGCCGTGCTCCTCACCACCCGGCAGTACTTT
TACAACCTCCCATCAGGTGACCCCCTTTCCCAGTCACGCCTCCACTTCTA
CACCTGTGAAAATGCAGAGCTCGATCGTCGAGGTCTTGCTCAGGATGCAG
GCTCCGGGGCCCTCTTCCGGAGACAAGCCATCATCGATGCAGGTGGATAT
CCGACGTACAGCTTCTCCGAGGATTGGCAGCTGTCGCTTGTTCTGAAGGG
GCTAGGCCACCGCACCATCCAAGTCCAGGAGCCGTTACAATTCGGATTGG
TTCCGACGTCCTTGGATGGACACATTGCACAGCGCAACCGGTGGCACATT
GGCCACTCTCAACAGCTTCGGGTGTTGATGCCGCCCACAAACAAGACACT
TCCCCGCTCGCTGCAGTGGAGTATTGCACAGAATGGCGTCTTCATCATGG
CTGGAGGCCTTGGCTGTTTGATTTCATTTGCAATGGTTCCATTGCTTCTG
GCATCGGGTCAGCTGGTCCCAGACATTTCGCCATTGCTGGCCAAAGCACA
GTTTCTTCTGGCTGTTCTCCATATCGCCTTGACATGGGCGTATGGACTTT
TGCAAAGCGCGCACACGGGATTCGAAAGCTTTCCGTTTTCTCGTTTTGAA
AATATCTGGCTGGCAGGAGGTAAGATACATACCTTTGTTTTTTATTGTTC
TGTTGTACAGTTGCGTATTGTCATTACCCGTTCTATTATGGTCTTGAATG
GTTCCTGGACTTCACCTTCTACCACTTTGTTCCTGATATTCTCTCACCCT
GCGTCCCTCCGCGATAGGAGTTCTCTCTCTCTCATTCTACCACTCTTCAA
GATGAAACTAACAATAACAGCTCACATGCACGCCGTCGCTCGATTCCACC
TGCTCGCCAGCCGACCCAAAGGCTCCTTCGTAACTGGCAGCAGCGCCAAC
TCATGGAATTGCAGCGCGACCCCAACATCCTTCCAGAAGCTCTACCACAA
TCTGTGGCACAACGGGATCGCATACAGCATTGTCGTTTTGCTTGCCACTA
TCGCATCCATCGTCTACTCGATCTACACGGCTATCACAACCACTGATGAT
AGGCTGTTATCCCGCTTGCTCACCACGATTGCTTGGCCGCCGATGCTTCA
CATCTGCTACCTCTCCATCGTCAGTTACTGGGCACCAGTCTCATATCTGC
TGAACCCGCCGCGGTATCCGGAGCGGAAGGCTGGATTGGCTTTGTCGGAG
ACGGGCGTGGTGCTTCCGAGTCCGGAGGTCCAGCAAGCAGCTATGGTGCT
TGGGAAAGCACCGGTTGGGTTCTATCGTCAGTGCGTGGTGGTCGTGTTGG
TTCTGGGGGGGTTATTGTTGGGTGGATTGACGTTGTGAAAGGTAGAAGAG
ATAGAGTGGGTGCGCTACTAGATTAGATTGTAAGCAAATACGACGGTAGT
GTTAGGTGGTCTAGATATGGTAATTCATGCTGTTTGTCTCAG back to topCoding sequence (CDS) from alignment at ch6:1289171..1292062+ >KJC3_008214-T2 ID=KJC3_008214-T2|Name=KJC3_008214-T2|organism=Aspergillus niger KJC3|type=CDS|length=3654bp|location=Sequence derived from alignment at ch6:1289171..1292062+ (Aspergillus niger KJC3)
ATGGACCTCCAACCTTTATCTCGTCCTTCGCCTAGCTCTGTGTTTCTCTG
CTGTGCAACAAAATTGGCGAGCCTGGCTAACTCTGTTGGTCGAGACCGTT
CTCGCCAGTATGTCTATACCACCGTGAACTGCCGTGTTTCGACACGCCGG
CTCCCTTTTCGAGCAAACGAGGACGCGCAAGCTAATATGTTTTCAGTCAT
TTGGCGTCATGATCAGCTTCTCACCATGTTAGGTGGTTCGGCATCAGAGA
GCCAACCACGCAAAAGACTGCGATTACACGGCACCGACGATCTACCGCAG
GTGGACATTTTGGTGCCCTGCTGCGGAGAGCCTGTCGACGTCATTTTGGA
CACCGTGCGTGCTGCCTGTACAATGGACTATCCAGTTTCCAGCTTCCGGG
TCCGTGTATTGGACGATGGTGCTTCCACAGAGCTCGAGTCCGCCGTTGCA
GCACTGCGCACTGAATGGCCTCACCTCTTCTACCACACGCGCGGAAGGCA
ATCCGGTAAGGTCTTCGCCAAGGCTGGTAACATGAATTACGCCCTGTTCA
CCCTGCAAGAAAAGGCTCCACCTGAGTTTTGTGCCATCTTCGATGCAGAC
TCCATCCCCATGCCTCACTTTCTGAGGGCGACGTTGCCCCATCTCCTTCA
GACCCCGGAAGCCGTGCTCCTCACCACCCGGCAGTACTTTTACAACCTCC
CATCAGGTGACCCCCTTTCCCAGTCACGCCTCCACTTCTACACCTGTGAA
AATGCAGAGCTCGATCGTCGAGGTCTTGCTCAGGATGCAGGCTCCGGGGC
CCTCTTCCGGAGACAAGCCATCATCGATGCAGGTGGATATCCGACGTACA
GCTTCTCCGAGGATTGGCAGCTGTCGCTTGTTCTGAAGGGGCTAGGCCAC
CGCACCATCCAAGTCCAGGAGCCGTTACAATTCGGATTGGTTCCGACGTC
CTTGGATGGACACATTGCACAGCGCAACCGGTGGCACATTGGCCACTCTC
AACAGCTTCGGGTGTTGATGCCGCCCACAAACAAGACACTTCCCCGCTCG
CTGCAGTGGAGTATTGCACAGAATGGCGTCTTCATCATGGCTGGAGGCCT
TGGCTGTTTGATTTCATTTGCAATGGTTCCATTGCTTCTGGCATCGGGTC
AGCTGGTCCCAGACATTTCGCCATTGCTGGCCAAAGCACAGTTTCTTCTG
GCTGTTCTCCATATCGCCTTGACATGGGCGTATGGACTTTTGCAAAGCGC
GCACACGGGATTCGAAAGCTTTCCGTTTTCTCGTTTTGAAAATATCTGGC
TGGCAGGAGCTCACATGCACGCCGTCGCTCGATTCCACCTGCTCGCCAGC
CGACCCAAAGGCTCCTTCGTAACTGGCAGCAGCGCCAACTCATGGAATTG
CAGCGCGACCCCAACATCCTTCCAGAAGCTCTACCACAATCTGTGGCACA
ACGGGATCGCATACAGCATTGTCGTTTTGCTTGCCACTATCGCATCCATC
GTCTACTCGATCTACACGGCTATCACAACCACTGATGATAGGCTGTTATC
CCGCTTGCTCACCACGATTGCTTGGCCGCCGATGCTTCACATCTGCTACC
TCTCCATCGTCAGTTACTGGGCACCAGTCTCATATCTGCTGAACCCGCCG
CGGTATCCGGAGCGGAAGGCTGGATTGGCTTTGTCGGAGACGGGCGTGGT
GCTTCCGAGTCCGGAGGTCCAGCAAGCAGCTATGGTGCTTGGGAAAGCAC
CGGTTGGGTTCTATCGTCAGTGCGTGGTGGTCGTGTTGGTTCTGGGGGGG
TTATTGTTGGGTGGATTGACGTTGTGAATGGACCTCCAACCTTTATCTCG
TCCTTCGCCTAGCTCTGTGTTTCTCTGCTGTGCAACAAAATTGGCGAGCC
TGGCTAACTCTGTTGGTCGAGACCGTTCTCGCCAGTATGTCTATACCACC
GTGAACTGCCGTGTTTCGACACGCCGGCTCCCTTTTCGAGCAAACGAGGA
CGCGCAAGCTAATATGTTTTCAGTCATTTGGCGTCATGATCAGCTTCTCA
CCATGTTAGGTGGTTCGGCATCAGAGAGCCAACCACGCAAAAGACTGCGA
TTACACGGCACCGACGATCTACCGCAGGTGGACATTTTGGTGCCCTGCTG
CGGAGAGCCTGTCGACGTCATTTTGGACACCGTGCGTGCTGCCTGTACAA
TGGACTATCCAGTTTCCAGCTTCCGGGTCCGTGTATTGGACGATGGTGCT
TCCACAGAGCTCGAGTCCGCCGTTGCAGCACTGCGCACTGAATGGCCTCA
CCTCTTCTACCACACGCGCGGAAGGCAATCCGGTAAGGTCTTCGCCAAGG
CTGGTAACATGAATTACGCCCTGTTCACCCTGCAAGAAAAGGCTCCACCT
GAGTTTTGTGCCATCTTCGATGCAGACTCCATCCCCATGCCTCACTTTCT
GAGGGCGACGTTGCCCCATCTCCTTCAGACCCCGGAAGCCGTGCTCCTCA
CCACCCGGCAGTACTTTTACAACCTCCCATCAGGTGACCCCCTTTCCCAG
TCACGCCTCCACTTCTACACCTGTGAAAATGCAGAGCTCGATCGTCGAGG
TCTTGCTCAGGATGCAGGCTCCGGGGCCCTCTTCCGGAGACAAGCCATCA
TCGATGCAGGTGGATATCCGACGTACAGCTTCTCCGAGGATTGGCAGCTG
TCGCTTGTTCTGAAGGGGCTAGGCCACCGCACCATCCAAGTCCAGGAGCC
GTTACAATTCGGATTGGTTCCGACGTCCTTGGATGGACACATTGCACAGC
GCAACCGGTGGCACATTGGCCACTCTCAACAGCTTCGGGTGTTGATGCCG
CCCACAAACAAGACACTTCCCCGCTCGCTGCAGTGGAGTATTGCACAGAA
TGGCGTCTTCATCATGGCTGGAGGCCTTGGCTGTTTGATTTCATTTGCAA
TGGTTCCATTGCTTCTGGCATCGGGTCAGCTGGTCCCAGACATTTCGCCA
TTGCTGGCCAAAGCACAGTTTCTTCTGGCTGTTCTCCATATCGCCTTGAC
ATGGGCGTATGGACTTTTGCAAAGCGCGCACACGGGATTCGAAAGCTTTC
CGTTTTCTCGTTTTGAAAATATCTGGCTGGCAGGAGCTCACATGCACGCC
GTCGCTCGATTCCACCTGCTCGCCAGCCGACCCAAAGGCTCCTTCGTAAC
TGGCAGCAGCGCCAACTCATGGAATTGCAGCGCGACCCCAACATCCTTCC
AGAAGCTCTACCACAATCTGTGGCACAACGGGATCGCATACAGCATTGTC
GTTTTGCTTGCCACTATCGCATCCATCGTCTACTCGATCTACACGGCTAT
CACAACCACTGATGATAGGCTGTTATCCCGCTTGCTCACCACGATTGCTT
GGCCGCCGATGCTTCACATCTGCTACCTCTCCATCGTCAGTTACTGGGCA
CCAGTCTCATATCTGCTGAACCCGCCGCGGTATCCGGAGCGGAAGGCTGG
ATTGGCTTTGTCGGAGACGGGCGTGGTGCTTCCGAGTCCGGAGGTCCAGC
AAGCAGCTATGGTGCTTGGGAAAGCACCGGTTGGGTTCTATCGTCAGTGC
GTGGTGGTCGTGTTGGTTCTGGGGGGGTTATTGTTGGGTGGATTGACGTT
GTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008214-T2.utr5p1 | KJC3_008214-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008214-T2.utr3p1 | KJC3_008214-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.10 |
| Note | CAZy:GT2_Glyco_tranf_2_3 |
| DBxref | InterPro:IPR029044 |
| DBxref | PFAM:PF13632 |
| DBxref | PFAM:PF13641 |
| DBxref | PFAM:PF00535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1289171..1292062 + |
|
