You are here

Home

KJC3_008225-T1, KJC3_008225-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008225-T1
Unique NameKJC3_008225-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1315638..1316296+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008225-T1 ID=KJC3_008225-T1|Name=KJC3_008225-T1|organism=Aspergillus niger KJC3|type=mRNA|length=659bp|location=Sequence derived from alignment at ch6:1315638..1316296+ (Aspergillus niger KJC3)
ATGACTGCGAAATCCGCCGACTCCCCGGGGAATACCTACTACCCGAAGAG
TCCTCCGATGCGCCGCCCAGGCCTTACTTTTTTGTATCGACTTGAATGTA
CCATCGCCGCAGAAGAAATCAACGTTGGGGCACCGCACGGCGCAAGTATC
ATCCGAAGCATTGCAAATATTACCGGAGGTACATTCAAGGGACCAGAACT
CGAGGGCACAATCCTCCCGTTGGGAGGAGCAGACTGGGCAACAGTCATTG
AGGGGACACACGTGAATCTCCTCACCATTGCTATCTTTGCTGAAGAAACA
ACTAATAAAATCAGTCTATGACCCTGGACGCCCGATACACTATCAAAACC
ATAGACGATCACCACCTCTTCGTGCAGGCGCATGGGCTCTACCGTCCTGG
ACCGGGAACAGAATACGCGAAGCAGGTCGCAGCTGATCCGGAGATGAGGC
CCCCACCAACCGTCACACAGGATGACGTTGAATTCTTCTCCCATTTGCGA
ATTGAAGCGGGCGGAGGTAAATATAACTGGTTGAATGGGCTCGTCTGTGT
GGGAGTGATGAGTTGCGAGAACGATAGGATTATTATTGATGCGTATTATT
TGACGAACTTTGCGGGCGCTAGGCCCGAGGATGTTGTTGCTAAAAAGTCA
TCTCTTTAA
back to top

Coding sequence (CDS) from alignment at ch6:1315638..1316296+

>KJC3_008225-T1 ID=KJC3_008225-T1|Name=KJC3_008225-T1|organism=Aspergillus niger KJC3|type=CDS|length=1212bp|location=Sequence derived from alignment at ch6:1315638..1316296+ (Aspergillus niger KJC3)
ATGACTGCGAAATCCGCCGACTCCCCGGGGAATACCTACTACCCGAAGAG
TCCTCCGATGCGCCGCCCAGGCCTTACTTTTTTGTATCGACTTGAATGTA
CCATCGCCGCAGAAGAAATCAACGTTGGGGCACCGCACGGCGCAAGTATC
ATCCGAAGCATTGCAAATATTACCGGAGGTACATTCAAGGGACCAGAACT
CGAGGGCACAATCCTCCCGTTGGGAGGAGCAGACTGGGCAACAGTCATTG
AGGGGACACACTCTATGACCCTGGACGCCCGATACACTATCAAAACCATA
GACGATCACCACCTCTTCGTGCAGGCGCATGGGCTCTACCGTCCTGGACC
GGGAACAGAATACGCGAAGCAGGTCGCAGCTGATCCGGAGATGAGGCCCC
CACCAACCGTCACACAGGATGACGTTGAATTCTTCTCCCATTTGCGAATT
GAAGCGGGCGGAGGTAAATATAACTGGTTGAATGGGCTCGTCTGTGTGGG
AGTGATGAGTTGCGAGAACGATAGGATTATTATTGATGCGTATTATTTGA
CGAACTTTGCGGGCGCTAGGCCCGAGGATGTTGTTGCTAAAAAGTCATCT
CTTTAAATGACTGCGAAATCCGCCGACTCCCCGGGGAATACCTACTACCC
GAAGAGTCCTCCGATGCGCCGCCCAGGCCTTACTTTTTTGTATCGACTTG
AATGTACCATCGCCGCAGAAGAAATCAACGTTGGGGCACCGCACGGCGCA
AGTATCATCCGAAGCATTGCAAATATTACCGGAGGTACATTCAAGGGACC
AGAACTCGAGGGCACAATCCTCCCGTTGGGAGGAGCAGACTGGGCAACAG
TCATTGAGGGGACACACTCTATGACCCTGGACGCCCGATACACTATCAAA
ACCATAGACGATCACCACCTCTTCGTGCAGGCGCATGGGCTCTACCGTCC
TGGACCGGGAACAGAATACGCGAAGCAGGTCGCAGCTGATCCGGAGATGA
GGCCCCCACCAACCGTCACACAGGATGACGTTGAATTCTTCTCCCATTTG
CGAATTGAAGCGGGCGGAGGTAAATATAACTGGTTGAATGGGCTCGTCTG
TGTGGGAGTGATGAGTTGCGAGAACGATAGGATTATTATTGATGCGTATT
ATTTGACGAACTTTGCGGGCGCTAGGCCCGAGGATGTTGTTGCTAAAAAG
TCATCTCTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008225KJC3_008225Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008225-T1.exon1KJC3_008225-T1.exon1Aspergillus niger KJC3exon
KJC3_008225-T1.exon2KJC3_008225-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008225-T1.cdsKJC3_008225-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008225-T1KJC3_008225-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefPFAM:PF11578
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1315638..1316296 +
Powered by Drupal