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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1533483..1535668- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008299-T3 ID=KJC3_008299-T3|Name=KJC3_008299-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2186bp|location=Sequence derived from alignment at ch6:1533483..1535668- (Aspergillus niger KJC3)
TTTTCATTCTCTCAAAAGCTACAAGAATCGATAACTAAGAAAATGATCGA
CTCCGGCAAAGAATCCCTTCACCCAGCAACCCCTCACAATGCACTGGACA
GCCCAGCTCCATCCAAGAGGAGAAAGCTACCTGTTACACTTCTTTCTGGA
TTCTTAGTACTTCTCCCTCCTGCATTCTCAAATACACAGAGACTAATATA
ATAACCATCTAGGGAAGCGGCAAAACCACCCTTCTCGAACACATCCTCCT
CTCGCCCGACCATGGCCTCCGCATCGCAGTCATAGTAAATGACATGAGCA
GGTACATCCATCCATACCCAATTCTCGATTCAATTCCCATCTAATATGGA
GGTATAGTTTGAACATCGACGCAACCCTAATCAAACACCACCACACCGTC
TCCCACACGAAGGAATCCCTCATCCAGCTACAAAACGGTTGCATATGCTG
CACACTCCGCGGGGACTTACTCGCCGAGCTAGCGCGACTAGCATCCCAAG
ATGGAGTCGAGTACGTCGTTATCGAGAGCACAGGGATTAGTGAGCCGATG
CAGGTGGCTGAGACGTTCACGGCGGAGTTTGGGGCTGCCATGTTGGAGGC
GGATGGGGATGGGAGTGGTGGTGATCAGGTGTTGAGTGTGGAGGAGAGGA
AGGTTATTGAGGATATGTATGTTCCCTCTTTTCCCCTTCTATTGCGTGAT
TGATGTGGGCTGATGGATTGGTATGTACAGTGTCAAACAAGGCGGTCTCC
ACACCCTCACTACCCTCGACACCACCGTAACTGTCATCGACGCATTCAAT
CTCCACTCTAACCTGGACACCGCGGAATTTCTGTCCGATAGATATACCTC
CGGGGAAGTAATCCCCGAGGATGAGCGAACCATTTCCGACCTGATGGTCG
ATCAGATTGAGTTCGCGGATGTGATTATCATCAACAAGATTGATCTCGTT
GATAAGGTTGCTAAAGAGAAGATCCACACACTGATCAAATTGCTTAATCC
CGCGGCCAAGGTCATGGAGGCGAAGTACTCCAAGATTGATGTTAGGGAGA
TTCTGGGCACGGGGAGGTTTGATTTCGTCAAGGCGGCGAGCGGTGCCGGC
TGGTTGAGGAGTCTGCATGAGATGAGTCGGTTGAATACTGGGAATGGGGA
CAGGGTGGCGCCGAGGCCGGAGACGGTTGAGTAAGTTTATTATCTCTTCT
TCGTTTGACTGTTATGTGGCTGTGGTTGTGGTTTGCTCTTTGGCTAATAT
GTTGGCAGGTATGGGATTAATAACTTTGTGTATACGGCTAGACGGCCGTT
TCATCCCAGGAGGCTGTTCAAGTTGCTCCATGATAAGTTCATTATCTTGC
AGAATGCGGCTGGGGCGGATGATGATGATGATGAAGAAGATGATGAAGAG
GATGATGATGATGACGAAGAAATGAAAGATGACGATGAAGATGACACTGA
AGACGAGGAAGAAGAAGAAGACGACGACGAAGAAGACATCACCTCCATCC
CCCCCGAAACCATCCTTTCCAACAAACGCTCTGACCCCATCCTCGCCCCC
ATCCTCCGCTCCAAAGGCTTCTTCTGGCTCGCCACCCGCCCATACCAATT
CGGCGAATGGAGCCAAGCCGGCGCCATGCTCACATTGGGCTGTGGTGGCG
GGTGGTTCGCCGAACTACCTGACGAAGCATGGCCGGAGGATGCGGACGTG
CGCAAGTCCATTGAAGACGACTTCAAGGGTGAATGGGGCGATCGGCGTCA
GGAGATTGTCTTCATTGGGGAGGGCATTGATACGGCAGCAATTAAAAAGC
TGCTTGATGAGTGTCTGCTAGACAAAAAGGAGATGAAGAAGTGGGAGAAA
GTGATGCGGACGAAGGGGGTCAAGAGGGCCGAGAAGCAGGAGGTTATGGC
GGGGATTTGGGAGGATGGATGGGAGGATTGGCCTGATTTGGAGGAGGATG
ATATTAAGGATGAGGAGGAGGAGAAGAAGAATGGGGAGAAGAGTGGGAAG
AGGAAGGCAAGTGAATTGATGAACGGCCATGGACATGGACATGCTCATGC
TCATGGGCACTCCCATGCACATGGACAGGCACATAAGACTCGACCAGTGG
TTAAGGAATGATGTTCATTATAGACTGTTATTTACTACTAAAAGTGACTA
TTTGCGTAACTCATGAAACTATATACTCTCACACCA back to topCoding sequence (CDS) from alignment at ch6:1533483..1535668- >KJC3_008299-T3 ID=KJC3_008299-T3|Name=KJC3_008299-T3|organism=Aspergillus niger KJC3|type=CDS|length=4266bp|location=Sequence derived from alignment at ch6:1533483..1535668- (Aspergillus niger KJC3)
GTATGGGATTAATAACTTTGTGTATACGGCTAGACGGCCGTTTCATCCCA
GGAGGCTGTTCAAGTTGCTCCATGATAAGTTCATTATCTTGCAGAATGCG
GCTGGGGCGGATGATGATGATGATGAAGAAGATGATGAAGAGGATGATGA
TGATGACGAAGAAATGAAAGATGACGATGAAGATGACACTGAAGACGAGG
AAGAAGAAGAAGACGACGACGAAGAAGACATCACCTCCATCCCCCCCGAA
ACCATCCTTTCCAACAAACGCTCTGACCCCATCCTCGCCCCCATCCTCCG
CTCCAAAGGCTTCTTCTGGCTCGCCACCCGCCCATACCAATTCGGCGAAT
GGAGCCAAGCCGGCGCCATGCTCACATTGGGCTGTGGTGGCGGGTGGTTC
GCCGAACTACCTGACGAAGCATGGCCGGAGGATGCGGACGTGCGCAAGTC
CATTGAAGACGACTTCAAGGGTGAATGGGGCGATCGGCGTCAGGAGATTG
TCTTCATTGGGGAGGGCATTGATACGGCAGCAATTAAAAAGCTGCTTGAT
GAGTGTCTGCTAGACAAAAAGGAGATGAAGAAGTGGGAGAAAGTGATGCG
GACGAAGGGGGTCAAGAGGGCCGAGAAGCAGGAGGTTATGGCGGGGATTT
GGGAGGATGGATGGGAGGATTGGCCTGATTTGGAGGAGGATGATATTAAG
GATGAGGAGGAGGAGAAGAAGAATGGGGAGAAGAGTGGGAAGAGGAAGGC
AAGTGAATTGATGAACGGCCATGGACATGGACATGCTCATGCTCATGGGC
ACTCCCATGCACATGGACAGGCACATAAGACTCGACCAGTGGTTAAGGAA
TGATGTCAAACAAGGCGGTCTCCACACCCTCACTACCCTCGACACCACCG
TAACTGTCATCGACGCATTCAATCTCCACTCTAACCTGGACACCGCGGAA
TTTCTGTCCGATAGATATACCTCCGGGGAAGTAATCCCCGAGGATGAGCG
AACCATTTCCGACCTGATGGTCGATCAGATTGAGTTCGCGGATGTGATTA
TCATCAACAAGATTGATCTCGTTGATAAGGTTGCTAAAGAGAAGATCCAC
ACACTGATCAAATTGCTTAATCCCGCGGCCAAGGTCATGGAGGCGAAGTA
CTCCAAGATTGATGTTAGGGAGATTCTGGGCACGGGGAGGTTTGATTTCG
TCAAGGCGGCGAGCGGTGCCGGCTGGTTGAGGAGTCTGCATGAGATGAGT
CGGTTGAATACTGGGAATGGGGACAGGGTGGCGCCGAGGCCGGAGACGGT
TGAATGCAGGTGGCTGAGACGTTCACGGCGGAGTTTGGGGCTGCCATGTT
GGAGGCGGATGGGGATGGGAGTGGTGGTGATCAGGTGTTGAGTGTGGAGG
AGAGGAAGGTTATTGAGGATATGTATGGGATTAATAACTTTGTGTATACG
GCTAGACGGCCGTTTCATCCCAGGAGGCTGTTCAAGTTGCTCCATGATAA
GTTCATTATCTTGCAGAATGCGGCTGGGGCGGATGATGATGATGATGAAG
AAGATGATGAAGAGGATGATGATGATGACGAAGAAATGAAAGATGACGAT
GAAGATGACACTGAAGACGAGGAAGAAGAAGAAGACGACGACGAAGAAGA
CATCACCTCCATCCCCCCCGAAACCATCCTTTCCAACAAACGCTCTGACC
CCATCCTCGCCCCCATCCTCCGCTCCAAAGGCTTCTTCTGGCTCGCCACC
CGCCCATACCAATTCGGCGAATGGAGCCAAGCCGGCGCCATGCTCACATT
GGGCTGTGGTGGCGGGTGGTTCGCCGAACTACCTGACGAAGCATGGCCGG
AGGATGCGGACGTGCGCAAGTCCATTGAAGACGACTTCAAGGGTGAATGG
GGCGATCGGCGTCAGGAGATTGTCTTCATTGGGGAGGGCATTGATACGGC
AGCAATTAAAAAGCTGCTTGATGAGTGTCTGCTAGACAAAAAGGAGATGA
AGAAGTGGGAGAAAGTGATGCGGACGAAGGGGGTCAAGAGGGCCGAGAAG
CAGGAGGTTATGGCGGGGATTTGGGAGGATGGATGGGAGGATTGGCCTGA
TTTGGAGGAGGATGATATTAAGGATGAGGAGGAGGAGAAGAAGAATGGGG
AGAAGAGTGGGAAGAGGAAGGCAAGTGAATTGATGAACGGCCATGGACAT
GGACATGCTCATGCTCATGGGCACTCCCATGCACATGGACAGGCACATAA
GACTCGACCAGTGGTTAAGGAATGATGTCAAACAAGGCGGTCTCCACACC
CTCACTACCCTCGACACCACCGTAACTGTCATCGACGCATTCAATCTCCA
CTCTAACCTGGACACCGCGGAATTTCTGTCCGATAGATATACCTCCGGGG
AAGTAATCCCCGAGGATGAGCGAACCATTTCCGACCTGATGGTCGATCAG
ATTGAGTTCGCGGATGTGATTATCATCAACAAGATTGATCTCGTTGATAA
GGTTGCTAAAGAGAAGATCCACACACTGATCAAATTGCTTAATCCCGCGG
CCAAGGTCATGGAGGCGAAGTACTCCAAGATTGATGTTAGGGAGATTCTG
GGCACGGGGAGGTTTGATTTCGTCAAGGCGGCGAGCGGTGCCGGCTGGTT
GAGGAGTCTGCATGAGATGAGTCGGTTGAATACTGGGAATGGGGACAGGG
TGGCGCCGAGGCCGGAGACGGTTGAATGCAGGTGGCTGAGACGTTCACGG
CGGAGTTTGGGGCTGCCATGTTGGAGGCGGATGGGGATGGGAGTGGTGGT
GATCAGGTGTTGAGTGTGGAGGAGAGGAAGGTTATTGAGGATATGTATGG
GATTAATAACTTTGTGTATACGGCTAGACGGCCGTTTCATCCCAGGAGGC
TGTTCAAGTTGCTCCATGATAAGTTCATTATCTTGCAGAATGCGGCTGGG
GCGGATGATGATGATGATGAAGAAGATGATGAAGAGGATGATGATGATGA
CGAAGAAATGAAAGATGACGATGAAGATGACACTGAAGACGAGGAAGAAG
AAGAAGACGACGACGAAGAAGACATCACCTCCATCCCCCCCGAAACCATC
CTTTCCAACAAACGCTCTGACCCCATCCTCGCCCCCATCCTCCGCTCCAA
AGGCTTCTTCTGGCTCGCCACCCGCCCATACCAATTCGGCGAATGGAGCC
AAGCCGGCGCCATGCTCACATTGGGCTGTGGTGGCGGGTGGTTCGCCGAA
CTACCTGACGAAGCATGGCCGGAGGATGCGGACGTGCGCAAGTCCATTGA
AGACGACTTCAAGGGTGAATGGGGCGATCGGCGTCAGGAGATTGTCTTCA
TTGGGGAGGGCATTGATACGGCAGCAATTAAAAAGCTGCTTGATGAGTGT
CTGCTAGACAAAAAGGAGATGAAGAAGTGGGAGAAAGTGATGCGGACGAA
GGGGGTCAAGAGGGCCGAGAAGCAGGAGGTTATGGCGGGGATTTGGGAGG
ATGGATGGGAGGATTGGCCTGATTTGGAGGAGGATGATATTAAGGATGAG
GAGGAGGAGAAGAAGAATGGGGAGAAGAGTGGGAAGAGGAAGGCAAGTGA
ATTGATGAACGGCCATGGACATGGACATGCTCATGCTCATGGGCACTCCC
ATGCACATGGACAGGCACATAAGACTCGACCAGTGGTTAAGGAATGATGT
CAAACAAGGCGGTCTCCACACCCTCACTACCCTCGACACCACCGTAACTG
TCATCGACGCATTCAATCTCCACTCTAACCTGGACACCGCGGAATTTCTG
TCCGATAGATATACCTCCGGGGAAGTAATCCCCGAGGATGAGCGAACCAT
TTCCGACCTGATGGTCGATCAGATTGAGTTCGCGGATGTGATTATCATCA
ACAAGATTGATCTCGTTGATAAGGTTGCTAAAGAGAAGATCCACACACTG
ATCAAATTGCTTAATCCCGCGGCCAAGGTCATGGAGGCGAAGTACTCCAA
GATTGATGTTAGGGAGATTCTGGGCACGGGGAGGTTTGATTTCGTCAAGG
CGGCGAGCGGTGCCGGCTGGTTGAGGAGTCTGCATGAGATGAGTCGGTTG
AATACTGGGAATGGGGACAGGGTGGCGCCGAGGCCGGAGACGGTTGAATG
CAGGTGGCTGAGACGTTCACGGCGGAGTTTGGGGCTGCCATGTTGGAGGC
GGATGGGGATGGGAGTGGTGGTGATCAGGTGTTGAGTGTGGAGGAGAGGA
AGGTTATTGAGGATAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008299-T3.utr3p1 | KJC3_008299-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008299-T3.utr5p1 | KJC3_008299-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR003495 |
| DBxref | InterPro:IPR011629 |
| DBxref | PFAM:PF07683 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1533483..1535668 - |
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