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KJC3_008393-T1, KJC3_008393-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008393-T1
Unique NameKJC3_008393-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1904851..1906852-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008393-T1 ID=KJC3_008393-T1|Name=KJC3_008393-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2002bp|location=Sequence derived from alignment at ch6:1904851..1906852- (Aspergillus niger KJC3)
CCAGGGATGATCCAATAGTTCGTGAATACCGATGCGGAGGTTTGCTCGGT
TTGCCCCATTTGGCTTGTTTGCCTGAAGCTAGTGCGGCGCTGATAACGAC
GGAATGACGCCGCGTCTGGCTCTGGTTCAACTCGCAATCACATCCCTCCA
TGGCACGCCCTCGCGCTCACTCGGGCGCTGATGCCCCTAAAGAGCCACAT
GCAGTCTCTCTCAAAGGTACGCTTTGCCGGACACCCTTATACTGCGGTAC
CTTGGCTGATCTTGTCCAGTATTGCGGTAAGCACCGAACATCATCCGACG
GCTCCGCTCGTTCCTGACCGTGCAAGGCTATCGCGACCTTCCTTATCCTA
TCAGTATCCCCTCCCGGCGGCAGACACGAAGATCTCAAGCAAAGCATCAC
TCAGCTATCCCGCCGATAATGTTGACGACCAGTTCATCCTCACTCCCAAT
GTACGAAGACCGTCCAGGATGAAGTTGTGATCTCACTGACTGTCCGACAA
GTTAACCCTACCGCCGGCTTTTGGGTCTGCATATGTGGGCGAGACATTTG
CATGCACCCTCAGCGCGAACAATGAATTACCGGATGAGGAGACGTCGCGC
GTCGTCACATCGGTTCGTATAGTTGCAGAGATGCAAACACCATCGCAGGT
AGCGGCGTTAGACCTAGAACCGGCCGAAGACACGGCTTCGAAGGACGGGG
TCCAGAAGGGCCATTCACTACAGAAAATAGTACGGTTTGATCTCAAGGAG
GAAGGGAATCACATCCTGGCGGTTAGCGTCAGCTACACGGAGACATTGAT
TGGGTCGGACGCGCAAGCAGCCAGCGGGCGCGTGAGAACTTTCCGCAAGC
TCTATCAGTTCGTGGCACAGCCCTGTTTGAGTGTGCGAACCAAGTCTTCA
GAGCTGGCGCCCCTGGAAGTCGAGAACAAGACACTCGGACCATATGGCAA
GACCCGGCTGCTCCGGTTTGCTCTGGAAGCACAACTAGAGAATGTAGGCG
ATGGTCCTGTTGTGGTCAAGGTTCGTTCGAACACAAATCATAGCCAAAGT
GCAGACACCTCCTGGGCGACATGCTAATCTTGACAGCAAACGAGGCTCAA
TCCGAAACCGCCATTCAAGGCCGTATCTCTCAATTGGGATCTACAAGGAC
CGGATCAAGCGGATCCGCGGCCACCGACTCTACATCCGCGGGATGTCTTG
CAGGTCGCATTCCTTGTCGAGCAAGAAGAAGGCCAACAGGAAGGGCTGGA
GACCCTGCAGAAGGACATGAAACGCGACGGACGCGCAGTGCTGGGCCAGC
TGTCGATCGAGTGGAGAGGCGCGATGGGCGACAAAGGATTCCTAACGACG
GGTAATTTGATGACGCGAAGACGGGCATGAGACAGACCAATCGGACGTAA
TATTTCCTGCTTACTGTCTCTCTGCTGCGTACCTGAATTGCAGCGGGCTT
TTTCCTTGGCCTTTGGCCCCCTTGTGTAACAACACACACACATTCCAGAC
ACTGCAGCCAGCGCAGATCCCGAAGAACCCCCAACTCTCTCTGTCTGTCT
GTGTGTGTGGCAGTCTGAAGACTCACAAGCTCACCGGTGATTTTCCTCAA
CCAATCACCGACTCCACGGAGGCATGCATCAGCGCTGAAGATGAATGGAT
GAGACGGGAGCCAAGCGGATGTTGCACGGATGCGAACCTTCTCAGGGCAG
CCAATCCCAATCCCCTAGCTTACGACACTTTGCGTGGTGGTTACACACGT
TTAAACGGGGACAAAGAAAGCGACGAGACTAGCTACCAACGGCACATCAT
ATGTTCGGGGGCTTATCTAGTACTAGTATAGGTAGGGCGTACAGAAGAAA
CAAAACCAAAAGAAGGTACCTTCCGACGGCGCCGCCCCCGTTAACGCCGA
CGGAAGCTTGGCCGTAACTCAGCCCATTCCATTTCTTTTCTATCTATAGA
TAGGTTCGTTCCTAACGAGGAAGGAGTCGTTGGATTATATCCCTTTACTT
AT
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Coding sequence (CDS) from alignment at ch6:1904851..1906852-

>KJC3_008393-T1 ID=KJC3_008393-T1|Name=KJC3_008393-T1|organism=Aspergillus niger KJC3|type=CDS|length=5055bp|location=Sequence derived from alignment at ch6:1904851..1906852- (Aspergillus niger KJC3)
CAAACGAGGCTCAATCCGAAACCGCCATTCAAGGCCGTATCTCTCAATTG
GGATCTACAAGGACCGGATCAAGCGGATCCGCGGCCACCGACTCTACATC
CGCGGGATGTCTTGCAGGTCGCATTCCTTGTCGAGCAAGAAGAAGGCCAA
CAGGAAGGGCTGGAGACCCTGCAGAAGGACATGAAACGCGACGGACGCGC
AGTGCTGGGCCAGCTGTCGATCGAGTGGAGAGGCGCGATGGGCGACAAAG
GATTCCTAACGACGGGTAATTTGATGACGCGAAGACGGGCATGATTAACC
CTACCGCCGGCTTTTGGGTCTGCATATGTGGGCGAGACATTTGCATGCAC
CCTCAGCGCGAACAATGAATTACCGGATGAGGAGACGTCGCGCGTCGTCA
CATCGGTTCGTATAGTTGCAGAGATGCAAACACCATCGCAGGTAGCGGCG
TTAGACCTAGAACCGGCCGAAGACACGGCTTCGAAGGACGGGGTCCAGAA
GGGCCATTCACTACAGAAAATAGTACGGTTTGATCTCAAGGAGGAAGGGA
ATCACATCCTGGCGGTTAGCGTCAGCTACACGGAGACATTGATTGGGTCG
GACGCGCAAGCAGCCAGCGGGCGCGTGAGAACTTTCCGCAAGCTCTATCA
GTTCGTGGCACAGCCCTGTTTGAGTGTGCGAACCAAGTCTTCAGAGCTGG
CGCCCCTGGAAGTCGAGAACAAGACACTCGGACCATATGGCAAGACCCGG
CTGCTCCGGTTTGCTCTGGAAGCACAACTAGAGAATGTAGGCGATGGTCC
TGTTGTGGTCAAGGCTATCGCGACCTTCCTTATCCTATCAGTATCCCCTC
CCGGCGGCAGACACGAAGATCTCAAGCAAAGCATCACTCAGCTATCCCGC
CGATAATGTTGACGACCAGTTCATCCTCACTCCCAATTATTGCGATGGCA
CGCCCTCGCGCTCACTCGGGCGCTGATGCCCCTAAAGAGCCACATGCAGT
CTCTCTCAAAGCAAACGAGGCTCAATCCGAAACCGCCATTCAAGGCCGTA
TCTCTCAATTGGGATCTACAAGGACCGGATCAAGCGGATCCGCGGCCACC
GACTCTACATCCGCGGGATGTCTTGCAGGTCGCATTCCTTGTCGAGCAAG
AAGAAGGCCAACAGGAAGGGCTGGAGACCCTGCAGAAGGACATGAAACGC
GACGGACGCGCAGTGCTGGGCCAGCTGTCGATCGAGTGGAGAGGCGCGAT
GGGCGACAAAGGATTCCTAACGACGGGTAATTTGATGACGCGAAGACGGG
CATGATTAACCCTACCGCCGGCTTTTGGGTCTGCATATGTGGGCGAGACA
TTTGCATGCACCCTCAGCGCGAACAATGAATTACCGGATGAGGAGACGTC
GCGCGTCGTCACATCGGTTCGTATAGTTGCAGAGATGCAAACACCATCGC
AGGTAGCGGCGTTAGACCTAGAACCGGCCGAAGACACGGCTTCGAAGGAC
GGGGTCCAGAAGGGCCATTCACTACAGAAAATAGTACGGTTTGATCTCAA
GGAGGAAGGGAATCACATCCTGGCGGTTAGCGTCAGCTACACGGAGACAT
TGATTGGGTCGGACGCGCAAGCAGCCAGCGGGCGCGTGAGAACTTTCCGC
AAGCTCTATCAGTTCGTGGCACAGCCCTGTTTGAGTGTGCGAACCAAGTC
TTCAGAGCTGGCGCCCCTGGAAGTCGAGAACAAGACACTCGGACCATATG
GCAAGACCCGGCTGCTCCGGTTTGCTCTGGAAGCACAACTAGAGAATGTA
GGCGATGGTCCTGTTGTGGTCAAGGCTATCGCGACCTTCCTTATCCTATC
AGTATCCCCTCCCGGCGGCAGACACGAAGATCTCAAGCAAAGCATCACTC
AGCTATCCCGCCGATAATGTTGACGACCAGTTCATCCTCACTCCCAATTA
TTGCGATGGCACGCCCTCGCGCTCACTCGGGCGCTGATGCCCCTAAAGAG
CCACATGCAGTCTCTCTCAAAGCAAACGAGGCTCAATCCGAAACCGCCAT
TCAAGGCCGTATCTCTCAATTGGGATCTACAAGGACCGGATCAAGCGGAT
CCGCGGCCACCGACTCTACATCCGCGGGATGTCTTGCAGGTCGCATTCCT
TGTCGAGCAAGAAGAAGGCCAACAGGAAGGGCTGGAGACCCTGCAGAAGG
ACATGAAACGCGACGGACGCGCAGTGCTGGGCCAGCTGTCGATCGAGTGG
AGAGGCGCGATGGGCGACAAAGGATTCCTAACGACGGGTAATTTGATGAC
GCGAAGACGGGCATGATTAACCCTACCGCCGGCTTTTGGGTCTGCATATG
TGGGCGAGACATTTGCATGCACCCTCAGCGCGAACAATGAATTACCGGAT
GAGGAGACGTCGCGCGTCGTCACATCGGTTCGTATAGTTGCAGAGATGCA
AACACCATCGCAGGTAGCGGCGTTAGACCTAGAACCGGCCGAAGACACGG
CTTCGAAGGACGGGGTCCAGAAGGGCCATTCACTACAGAAAATAGTACGG
TTTGATCTCAAGGAGGAAGGGAATCACATCCTGGCGGTTAGCGTCAGCTA
CACGGAGACATTGATTGGGTCGGACGCGCAAGCAGCCAGCGGGCGCGTGA
GAACTTTCCGCAAGCTCTATCAGTTCGTGGCACAGCCCTGTTTGAGTGTG
CGAACCAAGTCTTCAGAGCTGGCGCCCCTGGAAGTCGAGAACAAGACACT
CGGACCATATGGCAAGACCCGGCTGCTCCGGTTTGCTCTGGAAGCACAAC
TAGAGAATGTAGGCGATGGTCCTGTTGTGGTCAAGGCTATCGCGACCTTC
CTTATCCTATCAGTATCCCCTCCCGGCGGCAGACACGAAGATCTCAAGCA
AAGCATCACTCAGCTATCCCGCCGATAATGTTGACGACCAGTTCATCCTC
ACTCCCAATTATTGCGATGGCACGCCCTCGCGCTCACTCGGGCGCTGATG
CCCCTAAAGAGCCACATGCAGTCTCTCTCAAAGCAAACGAGGCTCAATCC
GAAACCGCCATTCAAGGCCGTATCTCTCAATTGGGATCTACAAGGACCGG
ATCAAGCGGATCCGCGGCCACCGACTCTACATCCGCGGGATGTCTTGCAG
GTCGCATTCCTTGTCGAGCAAGAAGAAGGCCAACAGGAAGGGCTGGAGAC
CCTGCAGAAGGACATGAAACGCGACGGACGCGCAGTGCTGGGCCAGCTGT
CGATCGAGTGGAGAGGCGCGATGGGCGACAAAGGATTCCTAACGACGGGT
AATTTGATGACGCGAAGACGGGCATGATTAACCCTACCGCCGGCTTTTGG
GTCTGCATATGTGGGCGAGACATTTGCATGCACCCTCAGCGCGAACAATG
AATTACCGGATGAGGAGACGTCGCGCGTCGTCACATCGGTTCGTATAGTT
GCAGAGATGCAAACACCATCGCAGGTAGCGGCGTTAGACCTAGAACCGGC
CGAAGACACGGCTTCGAAGGACGGGGTCCAGAAGGGCCATTCACTACAGA
AAATAGTACGGTTTGATCTCAAGGAGGAAGGGAATCACATCCTGGCGGTT
AGCGTCAGCTACACGGAGACATTGATTGGGTCGGACGCGCAAGCAGCCAG
CGGGCGCGTGAGAACTTTCCGCAAGCTCTATCAGTTCGTGGCACAGCCCT
GTTTGAGTGTGCGAACCAAGTCTTCAGAGCTGGCGCCCCTGGAAGTCGAG
AACAAGACACTCGGACCATATGGCAAGACCCGGCTGCTCCGGTTTGCTCT
GGAAGCACAACTAGAGAATGTAGGCGATGGTCCTGTTGTGGTCAAGGCTA
TCGCGACCTTCCTTATCCTATCAGTATCCCCTCCCGGCGGCAGACACGAA
GATCTCAAGCAAAGCATCACTCAGCTATCCCGCCGATAATGTTGACGACC
AGTTCATCCTCACTCCCAATTATTGCGATGGCACGCCCTCGCGCTCACTC
GGGCGCTGATGCCCCTAAAGAGCCACATGCAGTCTCTCTCAAAGCAAACG
AGGCTCAATCCGAAACCGCCATTCAAGGCCGTATCTCTCAATTGGGATCT
ACAAGGACCGGATCAAGCGGATCCGCGGCCACCGACTCTACATCCGCGGG
ATGTCTTGCAGGTCGCATTCCTTGTCGAGCAAGAAGAAGGCCAACAGGAA
GGGCTGGAGACCCTGCAGAAGGACATGAAACGCGACGGACGCGCAGTGCT
GGGCCAGCTGTCGATCGAGTGGAGAGGCGCGATGGGCGACAAAGGATTCC
TAACGACGGGTAATTTGATGACGCGAAGACGGGCATGATTAACCCTACCG
CCGGCTTTTGGGTCTGCATATGTGGGCGAGACATTTGCATGCACCCTCAG
CGCGAACAATGAATTACCGGATGAGGAGACGTCGCGCGTCGTCACATCGG
TTCGTATAGTTGCAGAGATGCAAACACCATCGCAGGTAGCGGCGTTAGAC
CTAGAACCGGCCGAAGACACGGCTTCGAAGGACGGGGTCCAGAAGGGCCA
TTCACTACAGAAAATAGTACGGTTTGATCTCAAGGAGGAAGGGAATCACA
TCCTGGCGGTTAGCGTCAGCTACACGGAGACATTGATTGGGTCGGACGCG
CAAGCAGCCAGCGGGCGCGTGAGAACTTTCCGCAAGCTCTATCAGTTCGT
GGCACAGCCCTGTTTGAGTGTGCGAACCAAGTCTTCAGAGCTGGCGCCCC
TGGAAGTCGAGAACAAGACACTCGGACCATATGGCAAGACCCGGCTGCTC
CGGTTTGCTCTGGAAGCACAACTAGAGAATGTAGGCGATGGTCCTGTTGT
GGTCAAGGCTATCGCGACCTTCCTTATCCTATCAGTATCCCCTCCCGGCG
GCAGACACGAAGATCTCAAGCAAAGCATCACTCAGCTATCCCGCCGATAA
TGTTGACGACCAGTTCATCCTCACTCCCAATTATTGCGATGGCACGCCCT
CGCGCTCACTCGGGCGCTGATGCCCCTAAAGAGCCACATGCAGTCTCTCT
CAAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008393KJC3_008393Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T1KJC3_008393-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T1.cdsKJC3_008393-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T1.utr3p1KJC3_008393-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T1.exon5KJC3_008393-T1.exon5Aspergillus niger KJC3exon
KJC3_008393-T1.exon4KJC3_008393-T1.exon4Aspergillus niger KJC3exon
KJC3_008393-T1.exon3KJC3_008393-T1.exon3Aspergillus niger KJC3exon
KJC3_008393-T1.exon2KJC3_008393-T1.exon2Aspergillus niger KJC3exon
KJC3_008393-T1.exon1KJC3_008393-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T1.utr5p1KJC3_008393-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010378
DBxrefPFAM:PF06159
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1904851..1906852 -
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