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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2224460..2225507+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008496-T1 ID=KJC3_008496-T1|Name=KJC3_008496-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1048bp|location=Sequence derived from alignment at ch6:2224460..2225507+ (Aspergillus niger KJC3) CTTTCCTCGAGAATAAACACACCCTGAGATACTACAAACATGTAAGTATG
CCGCAATATATATCGATGGACACGACGCTCACTCATCCTCGGTCACAGGG
AGGTTCTACTCGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGCCTCC
AAAGCTGCCATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGAC
AAAGCAGCTGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAG
ACACAGGTTCGTTGCAGCTTCCCCAGTGATCGGAGACGCGGAACCGCCAT
AAACTAGATAGCTAACCCGGAGCTCAATTAGTACAATTCGCGGAGTACAT
CCAAGCCAACATCCAACTATACACGATGCGGAACGATACGGAGCTGGGCC
CGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTGCGG
TCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCCCAT
CACGCAGAAGCCTCATCTATACTGGATTGATTATCTGGCATCATTGGCTC
CCGTACCATATGCTGCTCACGGCTATGCGCAGTAAGTGTGGGCGCTGAGT
AACAGCGGTCTCAAGCTGTTGGGATTCATGCTAAGGTGCTCTAGATACTA
CTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAG
AAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTA
CCGATCGATTACAAGGGTGTATGTTACCAGAGTCAATAGGCCCCGCAGTG
CGAGCGAGTATGGGTAGCTGACAACTTCTAGGTTCTGGTGAAGATCGTGA
CAAAGGACGGCGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAG
AGTGCCTAATGTGATGTATCATACCAATGATTGTCTTATGTTTTCGGTTT
CACGGGACTTGGGTTTCAAGAGAAGATCGGGTTGCATGGCAGGGTATTTT
CCATGACTTTGACCGAGATAAAGTCTCTTCTATTATTTAGCTAAAGTA back to topCoding sequence (CDS) from alignment at ch6:2224460..2225507+ >KJC3_008496-T1 ID=KJC3_008496-T1|Name=KJC3_008496-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch6:2224460..2225507+ (Aspergillus niger KJC3) ATGGAGGTTCTACTCGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGC CTCCAAAGCTGCCATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACA AGACAAAGCAGCTGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCG GGAGACACAGTACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATA CACGATGCGGAACGATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTG TCCGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTC AACCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATA CTGGATTGATTATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACG GCTATGCGCAATACTACTGCCTGTCCACTCTCGATAAACACCACCACCCC GACATCTCGCTCGAAGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGA ATTGAAGCGCAGACTACCGATCGATTACAAGGGTGTTCTGGTGAAGATCG TGACAAAGGACGGCGTGCAAGAAGTACCATTCGATAATGACAGGATTGTC AAGAGTGCCTAAATGGAGGTTCTACTCGGCATCACTGGAAAGGACTTCGT CATTCTGGCGGCCTCCAAAGCTGCCATGAGAGGCCCCACCATCCTCAAAG CCGAAGATGACAAGACAAAGCAGCTGAATGAACACAACCTTATGGCCTTC TCGGGAGAGGCGGGAGACACAGTACAATTCGCGGAGTACATCCAAGCCAA CATCCAACTATACACGATGCGGAACGATACGGAGCTGGGCCCGAGTGCGG TTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAAT CCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAA GCCTCATCTATACTGGATTGATTATCTGGCATCATTGGCTCCCGTACCAT ATGCTGCTCACGGCTATGCGCAATACTACTGCCTGTCCACTCTCGATAAA CACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAAGCTCTTGGAAAT GTGCACAGACGAATTGAAGCGCAGACTACCGATCGATTACAAGGGTGTTC TGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTACCATTCGATAAT GACAGGATTGTCAAGAGTGCCTAAATGGAGGTTCTACTCGGCATCACTGG AAAGGACTTCGTCATTCTGGCGGCCTCCAAAGCTGCCATGAGAGGCCCCA CCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTGAATGAACACAAC CTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACAATTCGCGGAGTA CATCCAAGCCAACATCCAACTATACACGATGCGGAACGATACGGAGCTGG GCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTG CGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCC CATCACGCAGAAGCCTCATCTATACTGGATTGATTATCTGGCATCATTGG CTCCCGTACCATATGCTGCTCACGGCTATGCGCAATACTACTGCCTGTCC ACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAA GCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGATT ACAAGGGTGTTCTGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTA CCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAATGGAGGTTCTACT CGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGCCTCCAAAGCTGCCA TGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTG AATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACA ATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACG ATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATG GCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGG AGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATC TGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATAC TACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGA AGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGAC TACCGATCGATTACAAGGGTGTTCTGGTGAAGATCGTGACAAAGGACGGC GTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAAT GGAGGTTCTACTCGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGCCT CCAAAGCTGCCATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAG ACAAAGCAGCTGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGG AGACACAGTACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATACA CGATGCGGAACGATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTC CGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAA CCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACT GGATTGATTATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGC TATGCGCAATACTACTGCCTGTCCACTCTCGATAAACACCACCACCCCGA CATCTCGCTCGAAGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAAT TGAAGCGCAGACTACCGATCGATTACAAGGGTGTTCTGGTGAAGATCGTG ACAAAGGACGGCGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAA GAGTGCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005839 | proteasome core complex |
Vocabulary: Biological Process
Term | Definition |
GO:0051603 | proteolysis involved in cellular protein catabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0004175 | endopeptidase activity |
GO:0004298 | threonine-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008496-T1.utr5p1 | KJC3_008496-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008496-T1.utr3p1 | KJC3_008496-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09263WSS |
Note | MEROPS:MER0002676 |
DBxref | InterPro:IPR035206 |
DBxref | InterPro:IPR023333 |
DBxref | InterPro:IPR016050 |
DBxref | InterPro:IPR001353 |
DBxref | InterPro:IPR029055 |
DBxref | PFAM:PF00227 |
Product | Probable proteasome subunit beta type-4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2224460..2225507 + |
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