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KJC3_008595-T1, KJC3_008595-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008595-T1
Unique NameKJC3_008595-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2464434..2465485-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008595-T1 ID=KJC3_008595-T1|Name=KJC3_008595-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1052bp|location=Sequence derived from alignment at ch6:2464434..2465485- (Aspergillus niger KJC3)
TATAACCAGTCGGCCACAATCACTTCTGCAATTAAGATATCCAGATAGAG
CATTAACATAATCATATCCTGCAAACTCATTTTCTCAGTCCTCACATCCA
ACTGAACTCCCAAACATGGCCATCTCTCCCGACCAGAAAATAGCCGTGGT
CATCTGCACCGCCTCCTACCACACGCCCGCCCCCTACGGGCCCTTCATGG
AGGCCCTAACCTCTCACGGCCTCTTCGAGGCATACTGTCCCCAGCGCGCA
ACCTGCGACCTCAGTAAGCTGAACGTGGGCGACGACCTCCAACATCCGGA
CTTCAACCGCGATCCACCCGCAGGAGGGTATCCCAACGACCTGGACGATG
TGAAGATCGTTCACGAGCTACTCGATAAGCTGATAAACCAGGAAAACAAA
CTCGTCCTCCTCCTGGGCCATTCCTCCGGCGGGTTGGTGGCCACCCAAGC
AGCCATTCCCGAGCTACAGTTCAGGAACCGCGGGCCCCAAAAAGGAGGCG
TGATTGGCATCTTCTATGTCGCCGGGTTCCTGGTGCCCGTCGGCGAATCC
GTACATAGTTTCTTCCAGCCTAAGGATGGAAGTTGGCGCGTTCCCCCTTT
TGTTCAGTTCTATGTATGTATGCCCCTGCCCTCCTGTGACATGTCTCTTT
CAAGGACACTGACATGTTGTATCCAGAAAAACGGAAGAGACGGTCTAGCA
ACCACCAAAGAAACAGCTCAGTACATGTTCAAGGGCCTGGATGACCCTCA
AGCAGTCGAGAAGTGGACCGCCACGTTGACGGCCTCGCCTGTCAACACTG
GAGCCTTGACTAACGATGCTTACGCCGCTGTTCCATGTGCTTATGTGGTC
CTTGATGAGGATACTTGTCTGCCGCCAGCGTATCAGGAGAAGATGATTGC
TATGCATGCCCAGCGCGAAAGTGTAGACTTCAAGGTATATCATGCTCCGA
CGGGGCACTCGCCGCATCTGAGCTGGATGGAAGGCTTGGTGAGGACGGTG
GTTGAGTTCACGGAGGAGGTGCGGCGAGTTTGAGGTGTTGAAAGAGAATA
GG
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Coding sequence (CDS) from alignment at ch6:2464434..2465485-

>KJC3_008595-T1 ID=KJC3_008595-T1|Name=KJC3_008595-T1|organism=Aspergillus niger KJC3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch6:2464434..2465485- (Aspergillus niger KJC3)
AAAAACGGAAGAGACGGTCTAGCAACCACCAAAGAAACAGCTCAGTACAT
GTTCAAGGGCCTGGATGACCCTCAAGCAGTCGAGAAGTGGACCGCCACGT
TGACGGCCTCGCCTGTCAACACTGGAGCCTTGACTAACGATGCTTACGCC
GCTGTTCCATGTGCTTATGTGGTCCTTGATGAGGATACTTGTCTGCCGCC
AGCGTATCAGGAGAAGATGATTGCTATGCATGCCCAGCGCGAAAGTGTAG
ACTTCAAGGTATATCATGCTCCGACGGGGCACTCGCCGCATCTGAGCTGG
ATGGAAGGCTTGGTGAGGACGGTGGTTGAGTTCACGGAGGAGGTGCGGCG
AGTTTGAATGGCCATCTCTCCCGACCAGAAAATAGCCGTGGTCATCTGCA
CCGCCTCCTACCACACGCCCGCCCCCTACGGGCCCTTCATGGAGGCCCTA
ACCTCTCACGGCCTCTTCGAGGCATACTGTCCCCAGCGCGCAACCTGCGA
CCTCAGTAAGCTGAACGTGGGCGACGACCTCCAACATCCGGACTTCAACC
GCGATCCACCCGCAGGAGGGTATCCCAACGACCTGGACGATGTGAAGATC
GTTCACGAGCTACTCGATAAGCTGATAAACCAGGAAAACAAACTCGTCCT
CCTCCTGGGCCATTCCTCCGGCGGGTTGGTGGCCACCCAAGCAGCCATTC
CCGAGCTACAGTTCAGGAACCGCGGGCCCCAAAAAGGAGGCGTGATTGGC
ATCTTCTATGTCGCCGGGTTCCTGGTGCCCGTCGGCGAATCCGTACATAG
TTTCTTCCAGCCTAAGGATGGAAGTTGGCGCGTTCCCCCTTTTGTTCAGT
TCTATAAAAACGGAAGAGACGGTCTAGCAACCACCAAAGAAACAGCTCAG
TACATGTTCAAGGGCCTGGATGACCCTCAAGCAGTCGAGAAGTGGACCGC
CACGTTGACGGCCTCGCCTGTCAACACTGGAGCCTTGACTAACGATGCTT
ACGCCGCTGTTCCATGTGCTTATGTGGTCCTTGATGAGGATACTTGTCTG
CCGCCAGCGTATCAGGAGAAGATGATTGCTATGCATGCCCAGCGCGAAAG
TGTAGACTTCAAGGTATATCATGCTCCGACGGGGCACTCGCCGCATCTGA
GCTGGATGGAAGGCTTGGTGAGGACGGTGGTTGAGTTCACGGAGGAGGTG
CGGCGAGTTTGAATGGCCATCTCTCCCGACCAGAAAATAGCCGTGGTCAT
CTGCACCGCCTCCTACCACACGCCCGCCCCCTACGGGCCCTTCATGGAGG
CCCTAACCTCTCACGGCCTCTTCGAGGCATACTGTCCCCAGCGCGCAACC
TGCGACCTCAGTAAGCTGAACGTGGGCGACGACCTCCAACATCCGGACTT
CAACCGCGATCCACCCGCAGGAGGGTATCCCAACGACCTGGACGATGTGA
AGATCGTTCACGAGCTACTCGATAAGCTGATAAACCAGGAAAACAAACTC
GTCCTCCTCCTGGGCCATTCCTCCGGCGGGTTGGTGGCCACCCAAGCAGC
CATTCCCGAGCTACAGTTCAGGAACCGCGGGCCCCAAAAAGGAGGCGTGA
TTGGCATCTTCTATGTCGCCGGGTTCCTGGTGCCCGTCGGCGAATCCGTA
CATAGTTTCTTCCAGCCTAAGGATGGAAGTTGGCGCGTTCCCCCTTTTGT
TCAGTTCTAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008595KJC3_008595Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008595-T1KJC3_008595-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008595-T1.cdsKJC3_008595-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008595-T1.utr3p1KJC3_008595-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008595-T1.exon2KJC3_008595-T1.exon2Aspergillus niger KJC3exon
KJC3_008595-T1.exon1KJC3_008595-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008595-T1.utr5p1KJC3_008595-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2464434..2465485 -
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