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KJC3_008611-T2, KJC3_008611-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008611-T2
Unique NameKJC3_008611-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2505039..2507225-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008611-T2 ID=KJC3_008611-T2|Name=KJC3_008611-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2187bp|location=Sequence derived from alignment at ch6:2505039..2507225- (Aspergillus niger KJC3)
ATCAAAACATACTTTCGGCTCCACGTTTGCAGCTCCAACTCCACGCTCGG
ACACGATGTGGCTAATAAGCTAGGCTTCATTACACAGACAAGTTCTACCC
CACGGGGTACTTGGAACCATCAGGATGGAAGGCATATGAAGGCCGGGAGG
GAGCACTGCTTAGTCCATTCCCCCGTCCTTTATTGATTAAGGGTAGTAGG
ACACAGCTCCTGCAAAGACAAGCCAAATGTCTGCACATAGCAATATGGAT
GACAAGGACATCGACGCAACGCACCATGAACTCGCTATGGAGAAATCCTT
AAAGCATCATGGCAAAGGCAGTAACCCAACCGGCACAGTGAAATTAGTCG
AGGATGGAGAAATAGTGTTGATTCCGACGCCGTCTCCGGATCCAAGAGGT
TTGATTCCTTCACAACCTGTTCGAGAATATCATATGGCTAACGAACAGTG
AAACAGATCCCTTGAACTACCCTCAATGGCAAAAATGGATAATCACGTTC
GTGCTGGGATTGTGTACGCTCCATCCCTTCCCTCACTAGACAAACCACCA
TCTAATACGATCAATCTAGTCTCCGTCCTCGGTGTTCTAATGACCTCCGG
AATGGGCCCCTTCGTCACTTTAATGGAAGCCTACTACGACTACAGCCCCC
GAACCGACGATCTAATGACCTACCCAACCCTCTTTATGGGAATAGGGAAC
ATCATCGCTATGCCACTCGCCATGGCAATCGGCAGACGCCCAGTATTCCT
AGGCTCTGCATTGATCCTGACCGTGGGATCAATATGGTGCGCTGCGAGCA
CAAGTCTTTCGTCGCATATAGCGGGAAGAGATGTGTTATCGTTGGCAGCA
GGGCAATCAGAAGCCTTATGTCCTCTTATCATCCAGGTACATCCACATCC
CCATCCCATATCCTATGCTTCATAGACCGAATAATCTAATCAACATAATC
CAGGAAATCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCTGGTTCAG
TGCCATCCAATCCATCGGCACCGCCGCCTTAACCATCGCCACATCCTACC
TAGTAAGTAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTCCATCGCC
AGCGGACTAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAATCCCGCTA
TGACCGACCAACCGACGCCTTCGAAGGCGAAGTGCACATCCATCACGACG
GCGAAGAGCAAGCCGTCATCCACGCAACCACCAAGAACCGCGTACCCCTA
GACTTCACCAACTACCAAGCCCGCACCTGGAAACACACTCTCAAAATCAT
GCACCCACCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAGCAAATGG
GACAATGCATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAATGAACAGC
GTCTCCCTCGGCATCTACGTTATCGGAGTGACAGAATACTCCTCCATCCT
AGGAGCCCCTCCATACAATTACCCAACAACAAGCCTAGGCCTAGTCCAGG
GCGGGCAAATCGTGGTAGCGATGATAATGGTTCCCGTACTCGGCTACGGC
GGCGATCAGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACGGCACCGT
TGAGTCCGAGATTCGGCTCATCCCGATGCTATTGCCGATTGTCGTACTGC
TTATTTCATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTACGGAGTGG
TCGCCGTGGGCGATTACCACTACCTTTAGCGGGATGTATTTCGCTTATAT
AGGAATTATTCTCAACGGGTACACGTATTCGTTGGATAGTTATGGAGAGC
GAGCGGCGCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTTTATTTCT
TTTGGGATCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGGGGTTCCA
GGGTGCTTTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCGGCGCTTG
GAATTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTACGATGAAA
TATGCGGTGGATGGGAGGAGTGCGGAGTTTTGATTGAGATGCTATGGGTT
GTTTTGTTGAGTTTGTTGATACGACGTAGCTATTTGATGTGACGTTTGAA
GCTGGATTCGGTTTATTTAACTTGAAATATATTGGGTGGGGGTTTAACAT
ATATCCAGCACATAGCTCTGTCTATCAGAATGACACC
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Coding sequence (CDS) from alignment at ch6:2505039..2507225-

>KJC3_008611-T2 ID=KJC3_008611-T2|Name=KJC3_008611-T2|organism=Aspergillus niger KJC3|type=CDS|length=2754bp|location=Sequence derived from alignment at ch6:2505039..2507225- (Aspergillus niger KJC3)
GAAATCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCTGGTTCAGTGC
CATCCAATCCATCGGCACCGCCGCCTTAACCATCGCCACATCCTACCTAG
TAAGTAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTCCATCGCCAGC
GGACTAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAATCCCGCTATGA
CCGACCAACCGACGCCTTCGAAGGCGAAGTGCACATCCATCACGACGGCG
AAGAGCAAGCCGTCATCCACGCAACCACCAAGAACCGCGTACCCCTAGAC
TTCACCAACTACCAAGCCCGCACCTGGAAACACACTCTCAAAATCATGCA
CCCACCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAGCAAATGGGAC
AATGCATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAATGAACAGCGTC
TCCCTCGGCATCTACGTTATCGGAGTGACAGAATACTCCTCCATCCTAGG
AGCCCCTCCATACAATTACCCAACAACAAGCCTAGGCCTAGTCCAGGGCG
GGCAAATCGTGGTAGCGATGATAATGGTTCCCGTACTCGGCTACGGCGGC
GATCAGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACGGCACCGTTGA
GTCCGAGATTCGGCTCATCCCGATGCTATTGCCGATTGTCGTACTGCTTA
TTTCATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTACGGAGTGGTCG
CCGTGGGCGATTACCACTACCTTTAGCGGGATGTATTTCGCTTATATAGG
AATTATTCTCAACGGGTACACGTATTCGTTGGATAGTTATGGAGAGCGAG
CGGCGCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTTTATTTCTTTT
GGGATCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGGGGTTCCAGGG
TGCTTTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCGGCGCTTGGAA
TTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTACGATGAAATAT
GCGGTGGATGGGAGGAGTGCGGAGTTTTGAATGACCTCCGGAATGGGCCC
CTTCGTCACTTTAATGGAAGCCTACTACGACTACAGCCCCCGAACCGACG
ATCTAATGACCTACCCAACCCTCTTTATGGGAATAGGGAACATCATCGCT
ATGCCACTCGCCATGGCAATCGGCAGACGCCCAGTATTCCTAGGCTCTGC
ATTGATCCTGACCGTGGGATCAATATGGTGCGCTGCGAGCACAAGTCTTT
CGTCGCATATAGCGGGAAGAGATGTGTTATCGTTGGCAGCAGGGCAATCA
GAAGCCTTATGTCCTCTTATCATCCAGGAAATCCACTTCGTCCACGAACG
CAGCAGCCGACTCGCCTGGTTCAGTGCCATCCAATCCATCGGCACCGCCG
CCTTAACCATCGCCACATCCTACCTAGTAAGTAGCCTGGGCTGGAGATGG
TGGTACGGGGTATTCTCCATCGCCAGCGGACTAGTCTTCATCGGCGCATT
CACCCTAGTCCCCGAATCCCGCTATGACCGACCAACCGACGCCTTCGAAG
GCGAAGTGCACATCCATCACGACGGCGAAGAGCAAGCCGTCATCCACGCA
ACCACCAAGAACCGCGTACCCCTAGACTTCACCAACTACCAAGCCCGCAC
CTGGAAACACACTCTCAAAATCATGCACCCACCAGCGAACTGGGAAGAAG
CCCTAACATGCTACAAGCAAATGGGACAATGCATCCTGTTCCCTAACATC
CTCTGGGTGGTCCTAATGAACAGCGTCTCCCTCGGCATCTACGTTATCGG
AGTGACAGAATACTCCTCCATCCTAGGAGCCCCTCCATACAATTACCCAA
CAACAAGCCTAGGCCTAGTCCAGGGCGGGCAAATCGTGGTAGCGATGATA
ATGGTTCCCGTACTCGGCTACGGCGGCGATCAGCTATACAAATGGGTCGC
GAGCCGTCGAGGGAACGGCACCGTTGAGTCCGAGATTCGGCTCATCCCGA
TGCTATTGCCGATTGTCGTACTGCTTATTTCATGCGTTATCTTTGGCCGT
GCTGGATCTCATCCTACGGAGTGGTCGCCGTGGGCGATTACCACTACCTT
TAGCGGGATGTATTTCGCTTATATAGGAATTATTCTCAACGGGTACACGT
ATTCGTTGGATAGTTATGGAGAGCGAGCGGCGCCAATTCTGGTTCTGATT
TGTGCCATTCGCGGGTTTATTTCTTTTGGGATCTCGTTTGGGATTACGAA
GTTCGTGACTGAGAAGGGGTTCCAGGGTGCTTTGGATATTTGTGCGATCA
TTGCGGGTGTTGTGGCGGCGCTTGGAATTCCGGTTTTTGTCTTTGGGGCC
TGGATTAGAAGGGTTACGATGAAATATGCGGTGGATGGGAGGAGTGCGGA
GTTTTGAATGACCTCCGGAATGGGCCCCTTCGTCACTTTAATGGAAGCCT
ACTACGACTACAGCCCCCGAACCGACGATCTAATGACCTACCCAACCCTC
TTTATGGGAATAGGGAACATCATCGCTATGCCACTCGCCATGGCAATCGG
CAGACGCCCAGTATTCCTAGGCTCTGCATTGATCCTGACCGTGGGATCAA
TATGGTGCGCTGCGAGCACAAGTCTTTCGTCGCATATAGCGGGAAGAGAT
GTGTTATCGTTGGCAGCAGGGCAATCAGAAGCCTTATGTCCTCTTATCAT
CCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008611KJC3_008611Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008611-T2KJC3_008611-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008611-T2.cdsKJC3_008611-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008611-T2.utr3p1KJC3_008611-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008611-T2.exon3KJC3_008611-T2.exon3Aspergillus niger KJC3exon
KJC3_008611-T2.exon2KJC3_008611-T2.exon2Aspergillus niger KJC3exon
KJC3_008611-T2.exon1KJC3_008611-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008611-T2.utr5p2KJC3_008611-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008611-T2.utr5p1KJC3_008611-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2505039..2507225 -
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