|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2533972..2535388- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008625-T1 ID=KJC3_008625-T1|Name=KJC3_008625-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1417bp|location=Sequence derived from alignment at ch6:2533972..2535388- (Aspergillus niger KJC3)
ATGACAGCCTCGGTATTTCAGCTCAAGTGCGGGATCAAGGTATGCATCCA
TTTATCACATTAAACCCCCTAAATTCGCGCAATTTACTGACATTAATAGA
ATGATCCCTGGGGTAAGAAAGGCAAAAACTCCTTAGCTGGTGTTCTATGC
TCTAAGACCCCCGGTACGTTGGAATTGGAGAATGATCAGCATTATTCGGA
GGTATGTCCCTTTACCCACCTTATTCTCACAGAAAACGAGACTAATTAAC
TGTGACTACAGATGTGGATGGGCACGTATCCCACCGTCCCATCTCGTATC
CTGGCCACAGGTGAGCTTCTAAGCGAGTATCTCCAAAAGCACCCAGAGGT
CACCGGCGAAGGATACAAGAAATGGGGTGCGGAGGTGCCGTTTCTCCCTA
AGGTACATTCCTACCCTATACTACCCCCATCCGACAATCCAGATGAATAC
TAACGACAAACTTGTACAATTGAAGATCCTCTCCTTCCAAAAAGCCCTCC
CTCTCCAAATTCACCCTGACAAAACCCTCGCCGAACAACTCCACAAATCC
AACCCAGACAAATACTCCGACCCCAACCACAAGCCCGAAATCGCCATCGC
GCTCTCCAACTTCGAGCTCTTCGTCGGCTTCAAGCCCCTGCACGAGATCG
AAAACCTATTCAAACTCGCCCCCCTCCAACGCTTCCTCCCCACAGAAACC
AACGCCCCTACCTTCGACGATTCCCTTCTCCGCGAAATCTCGCGCATCCT
ACTCACCCTTCCCCCGCTCCTCGTCTCCGAAACCATCTCCTCCCTGCTCA
CTATCCCGGAGGCCCAATTCGGCCCGAATCAGCGATACATTCCAGGTCTA
CTCACTCGATTGAAGAAGATGTACCCGGAGACCGATAATGGTAGTCTTGT
TGCCACGATTCTTATGAATTACATAACCCTGGGGCCCGGGGAAGCAGTTT
GTGTCCCTGCGGATAGTATGCATGCGTACCTTACCGGAGATATCATGGAG
TGCATGGCCAGGTCGGATAATGTCATTAATACGGGATTTTGTCCCAAGGC
GGAGAGCGATGATGTGGATTTGTTTACGGGGGCGTTGAGTTTCCAGCCGC
ATGATGTGGAGAGTGCGCTTTTGAGGACGAAGAAAAGTGATGTTGGTGGT
TGTTGGAAGACGGAGGTTTATGAGCCGCCGTTTTCGGAGTTCTCGGTGCT
GGGGGTGAGGTTGGGGAAGGGGGAGAAGGAGGTGCATCGGGGGATTGGGG
GAGTGAGTTTGCTGGTGGTTGTAAGGGGAAATGGGTGGATGGAGGTGAAG
GGTGAGGAGAAGAAGTTTGAGCTGAGGGAAGGGTGGGTTTATTTCGTGGG
TGCTGGGGTTGAGGTCAGTTTTGAGACCGAGGGCGGGTTGTTGGTTTATA
GGCCTTTTGCGGAGTAG back to topCoding sequence (CDS) from alignment at ch6:2533972..2535388- >KJC3_008625-T1 ID=KJC3_008625-T1|Name=KJC3_008625-T1|organism=Aspergillus niger KJC3|type=CDS|length=4896bp|location=Sequence derived from alignment at ch6:2533972..2535388- (Aspergillus niger KJC3)
ATCCTCTCCTTCCAAAAAGCCCTCCCTCTCCAAATTCACCCTGACAAAAC
CCTCGCCGAACAACTCCACAAATCCAACCCAGACAAATACTCCGACCCCA
ACCACAAGCCCGAAATCGCCATCGCGCTCTCCAACTTCGAGCTCTTCGTC
GGCTTCAAGCCCCTGCACGAGATCGAAAACCTATTCAAACTCGCCCCCCT
CCAACGCTTCCTCCCCACAGAAACCAACGCCCCTACCTTCGACGATTCCC
TTCTCCGCGAAATCTCGCGCATCCTACTCACCCTTCCCCCGCTCCTCGTC
TCCGAAACCATCTCCTCCCTGCTCACTATCCCGGAGGCCCAATTCGGCCC
GAATCAGCGATACATTCCAGGTCTACTCACTCGATTGAAGAAGATGTACC
CGGAGACCGATAATGGTAGTCTTGTTGCCACGATTCTTATGAATTACATA
ACCCTGGGGCCCGGGGAAGCAGTTTGTGTCCCTGCGGATAGTATGCATGC
GTACCTTACCGGAGATATCATGGAGTGCATGGCCAGGTCGGATAATGTCA
TTAATACGGGATTTTGTCCCAAGGCGGAGAGCGATGATGTGGATTTGTTT
ACGGGGGCGTTGAGTTTCCAGCCGCATGATGTGGAGAGTGCGCTTTTGAG
GACGAAGAAAAGTGATGTTGGTGGTTGTTGGAAGACGGAGGTTTATGAGC
CGCCGTTTTCGGAGTTCTCGGTGCTGGGGGTGAGGTTGGGGAAGGGGGAG
AAGGAGGTGCATCGGGGGATTGGGGGAGTGAGTTTGCTGGTGGTTGTAAG
GGGAAATGGGTGGATGGAGGTGAAGGGTGAGGAGAAGAAGTTTGAGCTGA
GGGAAGGGTGGGTTTATTTCGTGGGTGCTGGGGTTGAGGTCAGTTTTGAG
ACCGAGGGCGGGTTGTTGGTTTATAGGCCTTTTGCGGAGTAGATGTGGAT
GGGCACGTATCCCACCGTCCCATCTCGTATCCTGGCCACAGGTGAGCTTC
TAAGCGAGTATCTCCAAAAGCACCCAGAGGTCACCGGCGAAGGATACAAG
AAATGGGGTGCGGAGGTGCCGTTTCTCCCTAAGAATGATCCCTGGGGTAA
GAAAGGCAAAAACTCCTTAGCTGGTGTTCTATGCTCTAAGACCCCCGGTA
CGTTGGAATTGGAGAATGATCAGCATTATTCGGAGATGACAGCCTCGGTA
TTTCAGCTCAAGTGCGGGATCAAGATCCTCTCCTTCCAAAAAGCCCTCCC
TCTCCAAATTCACCCTGACAAAACCCTCGCCGAACAACTCCACAAATCCA
ACCCAGACAAATACTCCGACCCCAACCACAAGCCCGAAATCGCCATCGCG
CTCTCCAACTTCGAGCTCTTCGTCGGCTTCAAGCCCCTGCACGAGATCGA
AAACCTATTCAAACTCGCCCCCCTCCAACGCTTCCTCCCCACAGAAACCA
ACGCCCCTACCTTCGACGATTCCCTTCTCCGCGAAATCTCGCGCATCCTA
CTCACCCTTCCCCCGCTCCTCGTCTCCGAAACCATCTCCTCCCTGCTCAC
TATCCCGGAGGCCCAATTCGGCCCGAATCAGCGATACATTCCAGGTCTAC
TCACTCGATTGAAGAAGATGTACCCGGAGACCGATAATGGTAGTCTTGTT
GCCACGATTCTTATGAATTACATAACCCTGGGGCCCGGGGAAGCAGTTTG
TGTCCCTGCGGATAGTATGCATGCGTACCTTACCGGAGATATCATGGAGT
GCATGGCCAGGTCGGATAATGTCATTAATACGGGATTTTGTCCCAAGGCG
GAGAGCGATGATGTGGATTTGTTTACGGGGGCGTTGAGTTTCCAGCCGCA
TGATGTGGAGAGTGCGCTTTTGAGGACGAAGAAAAGTGATGTTGGTGGTT
GTTGGAAGACGGAGGTTTATGAGCCGCCGTTTTCGGAGTTCTCGGTGCTG
GGGGTGAGGTTGGGGAAGGGGGAGAAGGAGGTGCATCGGGGGATTGGGGG
AGTGAGTTTGCTGGTGGTTGTAAGGGGAAATGGGTGGATGGAGGTGAAGG
GTGAGGAGAAGAAGTTTGAGCTGAGGGAAGGGTGGGTTTATTTCGTGGGT
GCTGGGGTTGAGGTCAGTTTTGAGACCGAGGGCGGGTTGTTGGTTTATAG
GCCTTTTGCGGAGTAGATGTGGATGGGCACGTATCCCACCGTCCCATCTC
GTATCCTGGCCACAGGTGAGCTTCTAAGCGAGTATCTCCAAAAGCACCCA
GAGGTCACCGGCGAAGGATACAAGAAATGGGGTGCGGAGGTGCCGTTTCT
CCCTAAGAATGATCCCTGGGGTAAGAAAGGCAAAAACTCCTTAGCTGGTG
TTCTATGCTCTAAGACCCCCGGTACGTTGGAATTGGAGAATGATCAGCAT
TATTCGGAGATGACAGCCTCGGTATTTCAGCTCAAGTGCGGGATCAAGAT
CCTCTCCTTCCAAAAAGCCCTCCCTCTCCAAATTCACCCTGACAAAACCC
TCGCCGAACAACTCCACAAATCCAACCCAGACAAATACTCCGACCCCAAC
CACAAGCCCGAAATCGCCATCGCGCTCTCCAACTTCGAGCTCTTCGTCGG
CTTCAAGCCCCTGCACGAGATCGAAAACCTATTCAAACTCGCCCCCCTCC
AACGCTTCCTCCCCACAGAAACCAACGCCCCTACCTTCGACGATTCCCTT
CTCCGCGAAATCTCGCGCATCCTACTCACCCTTCCCCCGCTCCTCGTCTC
CGAAACCATCTCCTCCCTGCTCACTATCCCGGAGGCCCAATTCGGCCCGA
ATCAGCGATACATTCCAGGTCTACTCACTCGATTGAAGAAGATGTACCCG
GAGACCGATAATGGTAGTCTTGTTGCCACGATTCTTATGAATTACATAAC
CCTGGGGCCCGGGGAAGCAGTTTGTGTCCCTGCGGATAGTATGCATGCGT
ACCTTACCGGAGATATCATGGAGTGCATGGCCAGGTCGGATAATGTCATT
AATACGGGATTTTGTCCCAAGGCGGAGAGCGATGATGTGGATTTGTTTAC
GGGGGCGTTGAGTTTCCAGCCGCATGATGTGGAGAGTGCGCTTTTGAGGA
CGAAGAAAAGTGATGTTGGTGGTTGTTGGAAGACGGAGGTTTATGAGCCG
CCGTTTTCGGAGTTCTCGGTGCTGGGGGTGAGGTTGGGGAAGGGGGAGAA
GGAGGTGCATCGGGGGATTGGGGGAGTGAGTTTGCTGGTGGTTGTAAGGG
GAAATGGGTGGATGGAGGTGAAGGGTGAGGAGAAGAAGTTTGAGCTGAGG
GAAGGGTGGGTTTATTTCGTGGGTGCTGGGGTTGAGGTCAGTTTTGAGAC
CGAGGGCGGGTTGTTGGTTTATAGGCCTTTTGCGGAGTAGATGTGGATGG
GCACGTATCCCACCGTCCCATCTCGTATCCTGGCCACAGGTGAGCTTCTA
AGCGAGTATCTCCAAAAGCACCCAGAGGTCACCGGCGAAGGATACAAGAA
ATGGGGTGCGGAGGTGCCGTTTCTCCCTAAGAATGATCCCTGGGGTAAGA
AAGGCAAAAACTCCTTAGCTGGTGTTCTATGCTCTAAGACCCCCGGTACG
TTGGAATTGGAGAATGATCAGCATTATTCGGAGATGACAGCCTCGGTATT
TCAGCTCAAGTGCGGGATCAAGATCCTCTCCTTCCAAAAAGCCCTCCCTC
TCCAAATTCACCCTGACAAAACCCTCGCCGAACAACTCCACAAATCCAAC
CCAGACAAATACTCCGACCCCAACCACAAGCCCGAAATCGCCATCGCGCT
CTCCAACTTCGAGCTCTTCGTCGGCTTCAAGCCCCTGCACGAGATCGAAA
ACCTATTCAAACTCGCCCCCCTCCAACGCTTCCTCCCCACAGAAACCAAC
GCCCCTACCTTCGACGATTCCCTTCTCCGCGAAATCTCGCGCATCCTACT
CACCCTTCCCCCGCTCCTCGTCTCCGAAACCATCTCCTCCCTGCTCACTA
TCCCGGAGGCCCAATTCGGCCCGAATCAGCGATACATTCCAGGTCTACTC
ACTCGATTGAAGAAGATGTACCCGGAGACCGATAATGGTAGTCTTGTTGC
CACGATTCTTATGAATTACATAACCCTGGGGCCCGGGGAAGCAGTTTGTG
TCCCTGCGGATAGTATGCATGCGTACCTTACCGGAGATATCATGGAGTGC
ATGGCCAGGTCGGATAATGTCATTAATACGGGATTTTGTCCCAAGGCGGA
GAGCGATGATGTGGATTTGTTTACGGGGGCGTTGAGTTTCCAGCCGCATG
ATGTGGAGAGTGCGCTTTTGAGGACGAAGAAAAGTGATGTTGGTGGTTGT
TGGAAGACGGAGGTTTATGAGCCGCCGTTTTCGGAGTTCTCGGTGCTGGG
GGTGAGGTTGGGGAAGGGGGAGAAGGAGGTGCATCGGGGGATTGGGGGAG
TGAGTTTGCTGGTGGTTGTAAGGGGAAATGGGTGGATGGAGGTGAAGGGT
GAGGAGAAGAAGTTTGAGCTGAGGGAAGGGTGGGTTTATTTCGTGGGTGC
TGGGGTTGAGGTCAGTTTTGAGACCGAGGGCGGGTTGTTGGTTTATAGGC
CTTTTGCGGAGTAGATGTGGATGGGCACGTATCCCACCGTCCCATCTCGT
ATCCTGGCCACAGGTGAGCTTCTAAGCGAGTATCTCCAAAAGCACCCAGA
GGTCACCGGCGAAGGATACAAGAAATGGGGTGCGGAGGTGCCGTTTCTCC
CTAAGAATGATCCCTGGGGTAAGAAAGGCAAAAACTCCTTAGCTGGTGTT
CTATGCTCTAAGACCCCCGGTACGTTGGAATTGGAGAATGATCAGCATTA
TTCGGAGATGACAGCCTCGGTATTTCAGCTCAAGTGCGGGATCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0009298 | GDP-mannose biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0004476 | mannose-6-phosphate isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR018050 |
| DBxref | InterPro:IPR014710 |
| DBxref | InterPro:IPR001250 |
| DBxref | InterPro:IPR016305 |
| DBxref | PFAM:PF01238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2533972..2535388 - |
|
