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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2904384..2905824+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008748-T1 ID=KJC3_008748-T1|Name=KJC3_008748-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1441bp|location=Sequence derived from alignment at ch6:2904384..2905824+ (Aspergillus niger KJC3)
GAATCATTTCACATTTTGCAATTATCTTTGCTTGGGCCCTCCTGATTGTG
AATTACCTTCAGGCTTACCACCAATTCAGAAACCTGTAAGCAGACGAGCA
AGATGGCTCCTTCTAACCTTCACCATCCCTCGACTCGAGCGCTGCATGCA
GATGATCACCTTAACAGGGTGACAGATGTCGCACCTCCGATCCATCTATC
TACAACCTTCAGATTTCCCGATAATCCAGATGATTTGATCCCGTCGGTAG
ACCCTGTGGTATGTTTACGGATCAGCCAACGCACACTTTCCTATACAACG
ACCCCACGACTAAGAGCATTATCAGGAAGAGTTCGACGGCAAGAACTACA
TTTACTCGAGGGAATTCGCACCTAACGCAACTCGATTCGAAGCTGTCGTT
TCGTCACTTCTCAACGGCCGGGCCATCAGCTATTCGACCGGTCTCGCTGC
CCTCCAGGCCGCTCTAGTCCTCCTGAACCCCCGCCGCATCTCAGTCGGTG
AAGGCTACCACGGCAGTCATGAGGTCATCTCTGTTGTCTCCCGATTGTCA
GGGCTGCAGAAGCTACCGCTCGATTGCCCTGCTGATGCTCTTGACAAAGG
CGATGTCATCCTCCTGGAAACCCCCGTCAATCCGCTCGGAACTTCGTTTA
GTATTGATGAGTTCGCTAAGAAGGCCCATTCCAGAGGCGCTTATCTGGTG
GTAGATAGCACCTTCGGACCTCCTGGCCTTCAGGACCCCTTCCGGTGGGG
CGCTGACCTCGTTCTTCATTCGGGATCCAAGTATTTCGGAGGTCATAGTG
ACCTTCTATGTGGCGTACTCGCTACTCAGCGCAAAGACTGGGAGAAGCAG
CTGCTAGAAGATAGAGTCGCATTGGGCAATGTCATTGGCAACCTGGAGGC
ATGGCTTGGACTCCGGAGTCTACGCACCCTGGAGGTTCGTGTCCAACGAG
CGAGTCAGGGCTGCGGAAGTCTAGTTTCCTGGCTTCATAAGGCTTTGTCG
ACTCCTTCTACTGCTGCTGGAAGTGATGAACAAATAGTCCAGTCTGTTGT
CAAGAAAATCTACCATACCAGCCTGCAGGAGGAGCCGTGGATCCAGGAGC
AGATGCCTAACGGGTTTGGTCCTGTCTTCTCGATCGTCCTCCAAAGTGAA
AAGTATGCGCAAAGATTACCTAGCAAGTTGGCTTTCTTCCAACACGCCAC
GAGTCTGGGCGGTGTTGAGTCTTTGATCGAATGGCGCGCATTATCGGATT
CCCGGGTGGACCGGAAGTTGCTGCGACTGAGTATCGGGTTGGAGAATTGG
GTAGATTTAAAGAATGATTTGCTGGAGGGGTTTAAGGCGCTTTTGCAGGA
GTGATATGCACAGAGGATGGAAACGTATATAGGAACATGTTTGATGGAGA
CACTAGTGAGTTAATGCAAGCATCCCATGACAGAAAGTGCA back to topCoding sequence (CDS) from alignment at ch6:2904384..2905824+ >KJC3_008748-T1 ID=KJC3_008748-T1|Name=KJC3_008748-T1|organism=Aspergillus niger KJC3|type=CDS|length=2370bp|location=Sequence derived from alignment at ch6:2904384..2905824+ (Aspergillus niger KJC3)
ATGGCTCCTTCTAACCTTCACCATCCCTCGACTCGAGCGCTGCATGCAGA
TGATCACCTTAACAGGGTGACAGATGTCGCACCTCCGATCCATCTATCTA
CAACCTTCAGATTTCCCGATAATCCAGATGATTTGATCCCGTCGGTAGAC
CCTGTGGAAGAGTTCGACGGCAAGAACTACATTTACTCGAGGGAATTCGC
ACCTAACGCAACTCGATTCGAAGCTGTCGTTTCGTCACTTCTCAACGGCC
GGGCCATCAGCTATTCGACCGGTCTCGCTGCCCTCCAGGCCGCTCTAGTC
CTCCTGAACCCCCGCCGCATCTCAGTCGGTGAAGGCTACCACGGCAGTCA
TGAGGTCATCTCTGTTGTCTCCCGATTGTCAGGGCTGCAGAAGCTACCGC
TCGATTGCCCTGCTGATGCTCTTGACAAAGGCGATGTCATCCTCCTGGAA
ACCCCCGTCAATCCGCTCGGAACTTCGTTTAGTATTGATGAGTTCGCTAA
GAAGGCCCATTCCAGAGGCGCTTATCTGGTGGTAGATAGCACCTTCGGAC
CTCCTGGCCTTCAGGACCCCTTCCGGTGGGGCGCTGACCTCGTTCTTCAT
TCGGGATCCAAGTATTTCGGAGGTCATAGTGACCTTCTATGTGGCGTACT
CGCTACTCAGCGCAAAGACTGGGAGAAGCAGCTGCTAGAAGATAGAGTCG
CATTGGGCAATGTCATTGGCAACCTGGAGGCATGGCTTGGACTCCGGAGT
CTACGCACCCTGGAGGTTCGTGTCCAACGAGCGAGTCAGGGCTGCGGAAG
TCTAGTTTCCTGGCTTCATAAGGCTTTGTCGACTCCTTCTACTGCTGCTG
GAAGTGATGAACAAATAGTCCAGTCTGTTGTCAAGAAAATCTACCATACC
AGCCTGCAGGAGGAGCCGTGGATCCAGGAGCAGATGCCTAACGGGTTTGG
TCCTGTCTTCTCGATCGTCCTCCAAAGTGAAAAGTATGCGCAAAGATTAC
CTAGCAAGTTGGCTTTCTTCCAACACGCCACGAGTCTGGGCGGTGTTGAG
TCTTTGATCGAATGGCGCGCATTATCGGATTCCCGGGTGGACCGGAAGTT
GCTGCGACTGAGTATCGGGTTGGAGAATTGGGTAGATTTAAAGAATGATT
TGCTGGAGGGGTTTAAGGCGCTTTTGCAGGAGTGAATGGCTCCTTCTAAC
CTTCACCATCCCTCGACTCGAGCGCTGCATGCAGATGATCACCTTAACAG
GGTGACAGATGTCGCACCTCCGATCCATCTATCTACAACCTTCAGATTTC
CCGATAATCCAGATGATTTGATCCCGTCGGTAGACCCTGTGGAAGAGTTC
GACGGCAAGAACTACATTTACTCGAGGGAATTCGCACCTAACGCAACTCG
ATTCGAAGCTGTCGTTTCGTCACTTCTCAACGGCCGGGCCATCAGCTATT
CGACCGGTCTCGCTGCCCTCCAGGCCGCTCTAGTCCTCCTGAACCCCCGC
CGCATCTCAGTCGGTGAAGGCTACCACGGCAGTCATGAGGTCATCTCTGT
TGTCTCCCGATTGTCAGGGCTGCAGAAGCTACCGCTCGATTGCCCTGCTG
ATGCTCTTGACAAAGGCGATGTCATCCTCCTGGAAACCCCCGTCAATCCG
CTCGGAACTTCGTTTAGTATTGATGAGTTCGCTAAGAAGGCCCATTCCAG
AGGCGCTTATCTGGTGGTAGATAGCACCTTCGGACCTCCTGGCCTTCAGG
ACCCCTTCCGGTGGGGCGCTGACCTCGTTCTTCATTCGGGATCCAAGTAT
TTCGGAGGTCATAGTGACCTTCTATGTGGCGTACTCGCTACTCAGCGCAA
AGACTGGGAGAAGCAGCTGCTAGAAGATAGAGTCGCATTGGGCAATGTCA
TTGGCAACCTGGAGGCATGGCTTGGACTCCGGAGTCTACGCACCCTGGAG
GTTCGTGTCCAACGAGCGAGTCAGGGCTGCGGAAGTCTAGTTTCCTGGCT
TCATAAGGCTTTGTCGACTCCTTCTACTGCTGCTGGAAGTGATGAACAAA
TAGTCCAGTCTGTTGTCAAGAAAATCTACCATACCAGCCTGCAGGAGGAG
CCGTGGATCCAGGAGCAGATGCCTAACGGGTTTGGTCCTGTCTTCTCGAT
CGTCCTCCAAAGTGAAAAGTATGCGCAAAGATTACCTAGCAAGTTGGCTT
TCTTCCAACACGCCACGAGTCTGGGCGGTGTTGAGTCTTTGATCGAATGG
CGCGCATTATCGGATTCCCGGGTGGACCGGAAGTTGCTGCGACTGAGTAT
CGGGTTGGAGAATTGGGTAGATTTAAAGAATGATTTGCTGGAGGGGTTTA
AGGCGCTTTTGCAGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0030170 | pyridoxal phosphate binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019346 | transsulfuration |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008748-T1.utr5p1 | KJC3_008748-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008748-T1.utr3p1 | KJC3_008748-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR015421 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR000277 |
| DBxref | PFAM:PF01053 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2904384..2905824 + |
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