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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3145298..3146739+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008817-T1 ID=KJC3_008817-T1|Name=KJC3_008817-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1442bp|location=Sequence derived from alignment at ch6:3145298..3146739+ (Aspergillus niger KJC3)
ACTTGGTTGAGCAGGCGTGTGCTTACTAGGTTAGACTCGGGGGCCAGTAA
GCAAATTAGCCTTGCAGTCACTAGAGAGATACCCCATACTCCGTCGCTCC
GGTTCATCTGCCTCGGACCAGGTGAGGGGACAAACCGAGTCAGTCTGGAT
CTGATCATCAGGACAATTCAGGTTACTGGGATTATATTTCTCCTACGGCA
GAGCAATCATATCTGTCAGCTAAAGAATTCACTCGCCAGATTACACTGAC
CAATTTAACCAGAACGGCACATAGCCGTACCTTCAGGATATTACCACATC
TTACTGTATTATACCCCATCACGTGGGGGCAATTCTAGGTAGCAGCCTAA
GCTTCGTCTCGAGCGCAACTGATAACATCCACCCCGCTACTCCATATTCT
TTTCTAATAGTTGAAATTATTACTGGACTACTCACATCCTCACTGGCGCT
CACTATCAGTCTCGTCTCTTGCAATCTCTGAAGACTTCGTTTGCACAAAG
TCCCAACTCACAGAAACACCCGACACAGCTCTATACTCCCGACCGGTATC
TCCAAGGCGGCGAGGCCGCGGCCGCTAAGACCAACCAGACCATATCTACC
CCCCAGTTCGGTGCCTGTTCAAGACCTCAAGCTTGCCACAAGAGTTCACT
TCCAATCCTCACACCTAGCCAGCCAAAATGAATCGGCTATTCGGTACGAA
GAACACGGCACCCAAGCCAACGCTAGATGGGGCCATAACCAATGTACATT
TCCCCTTTTCCCTTCCAACCTTCGTCATTCATCATTGTTGCCCAACTCTC
CGAATTCATCTCGTCCCTTATCCGCCTGACCCCGCATGATTAACATTTCC
CCGACAGGTGGAAACACGCATTTCCAGCATTGACGTCAAGCTGGCGGCTC
TCAACTCGGAACTATCTACCTATCAAACCAAGATCTCCAAGATGCGCGAC
GGGCCGGGAAAAACCGCGTTACGGCAGAAAGCCCTCAAGGTTCTCCAGCG
ACGGAAACAGTACGAAGCGCAGCGGGATCAGCTGTCGCAGCAGTCATGGA
ATATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAATGTGATGACG
ACGGTTGATGCTATGAAGACGACAACCAAGACCCTCAAGAAGCAGTATGG
TCAGATTGATATTGATAAGATTGAACGGCTGCAGGATGAGATGGCGGATT
TGATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCGGGCGTATGAC
GTTCCCGAGGATGTCGATGAGGCGGAACTCGATGCGGAATTGGAGGCGCT
AGGCGAGGAGACTATGATGGAGAGCTCGATGGCTGATAGTGCTATGCCTA
GCTTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGATGAGCCCCCA
GAGCAGACTAAGGTTAAGGAGCCTGCTAGTGGGTTGGGTTAG back to topCoding sequence (CDS) from alignment at ch6:3145298..3146739+ >KJC3_008817-T1 ID=KJC3_008817-T1|Name=KJC3_008817-T1|organism=Aspergillus niger KJC3|type=CDS|length=1302bp|location=Sequence derived from alignment at ch6:3145298..3146739+ (Aspergillus niger KJC3)
ATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAGA
TGGGGCCATAACCAATGTGGAAACACGCATTTCCAGCATTGACGTCAAGC
TGGCGGCTCTCAACTCGGAACTATCTACCTATCAAACCAAGATCTCCAAG
ATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAGAAAGCCCTCAAGGT
TCTCCAGCGACGGAAACAGTACGAAGCGCAGCGGGATCAGCTGTCGCAGC
AGTCATGGAATATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAAT
GTGATGACGACGGTTGATGCTATGAAGACGACAACCAAGACCCTCAAGAA
GCAGTATGGTCAGATTGATATTGATAAGATTGAACGGCTGCAGGATGAGA
TGGCGGATTTGATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCGG
GCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAACTCGATGCGGAATT
GGAGGCGCTAGGCGAGGAGACTATGATGGAGAGCTCGATGGCTGATAGTG
CTATGCCTAGCTTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGAT
GAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCTAGTGGGTTGGGTTA
GATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAG
ATGGGGCCATAACCAATGTGGAAACACGCATTTCCAGCATTGACGTCAAG
CTGGCGGCTCTCAACTCGGAACTATCTACCTATCAAACCAAGATCTCCAA
GATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAGAAAGCCCTCAAGG
TTCTCCAGCGACGGAAACAGTACGAAGCGCAGCGGGATCAGCTGTCGCAG
CAGTCATGGAATATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAA
TGTGATGACGACGGTTGATGCTATGAAGACGACAACCAAGACCCTCAAGA
AGCAGTATGGTCAGATTGATATTGATAAGATTGAACGGCTGCAGGATGAG
ATGGCGGATTTGATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCG
GGCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAACTCGATGCGGAAT
TGGAGGCGCTAGGCGAGGAGACTATGATGGAGAGCTCGATGGCTGATAGT
GCTATGCCTAGCTTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGA
TGAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCTAGTGGGTTGGGTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007034 | vacuolar transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008817-T1.utr5p1 | KJC3_008817-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264OXC |
| DBxref | InterPro:IPR005024 |
| DBxref | PFAM:PF03357 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3145298..3146739 + |
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