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KJC3_008842-T1, KJC3_008842-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008842-T1
Unique NameKJC3_008842-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3225689..3227622+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008842-T1 ID=KJC3_008842-T1|Name=KJC3_008842-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1934bp|location=Sequence derived from alignment at ch6:3225689..3227622+ (Aspergillus niger KJC3)
CTCGTCTTTCCTTCCATCATCTCCAGCTTTTTCTGATCCTGTCAGCTCTT
CCTACTTCTCGTGTGTCTTCCTCCTTGCCGAAACTTTCTACACCCCCACG
ATCGCATATCTGTGGCTTCTGAGTGAGGTCACAATCCCTTCACCATGGTC
CAAATCAGTGAAGTGAAGGGCAACTCGCGCGAGAACAGAACCGCGGCCCA
CACGCATATCAAGGGTCTTGGTCTACGACAAGATGGCACTGCGGAGGCTT
CAGGAGATGGTTTCGTTGGACAGGCAACTGCTCGTGAGGTACGCGACAAC
ATTGGCGCTCAGAAGTCTTACTCTCTAAGCTCTTAAACTTATGTACTAAC
CCGGAGGCTTGATATGACAGGCATGCGGTGTCGTTGTTGATCTGATCAAG
GCGAAGAAGATGGCCGGTCGTGCCGTCCTCCTGGCTGGTGGACCCGGAAC
TGGAAAGACTGCTCTGGCCCTCGCCGTGTCGCAGGAGCTGGGAACCAAAG
TCCCCTTCTGTCCGATCGTTGGTAGTGAGATCTACTCTGCTGAGGTCAAG
AAAACAGAGGCACTCATGGAGAACTTCCGGAGGGCAATTGGTACGCGATC
CGTACAATCTTGACGCGAAAGTCTCAATAGCCTCTAATGCATCGATAGGT
CTCCGTGTTCGCGAAACGAAGGAAGTATACGAAGGTGAAGTCACGGAACT
TACCCCCGAAGAGACGGAGAACCCTCTGGGAGGATACGGACGCACGATCA
GCCATCTGATCATCGGCCTAAAGTCTGCCAAGGGCACCAAGAAGCTGCGC
CTGGACCCCAGCATCTACGAAGCCATCCAAAAGGAGCGGGTCACCGTGGG
AGACGTCATCTACATCGAAGCGAATACCGGAGCCTGCAAGCGTGTCGGAC
GGTCCGATGCCTACGCCACCGAGTTCGATCTTGAAGCAGAGGAATACGTG
CCCGTACCGAAGGGAGAGGTTCACAAGAAGAAGGAAATCGTCCAGGATGT
GACGCTGCACGATCTGGACATGGCCAATGCGCGGCCCCAGGGTGGACAGG
ATGTGATGAGCATGATGGGACAGCTCATGAAGCCCAAGAAGACCGAAATC
ACGGAGAAGTTGCGCCAGGAGATCAACAAGGTCGTCAACCGCTACATTGA
CCAGGGCGTTGCGGAGCTCGTTCCCGGTGTCCTCTTCATCGACGAGGTAG
ACTATTCCAGCCCTTCACAGCCTTACCTTACAATCAGTTGCTAACCCCAC
CCCTAGGTTCACATGCTCGATATCGAATGCTTCACATACCTCAACCGGGC
ACTCGAATCCTCCATCTCCCCCATTGTCATCCTTGCCTCTAACCGCGGCA
ACACGGTCATCCGCGGCACCGACGACATCTCCGCCGCCCACGGCATCCCT
CCCGACCTTCTCGCCCGTCTCCTCATCATCCCCACCCACCCTTACTCTCC
CGATGAGATCAAGACCATCATTCGCCTGCGCGCCAAGACAGAAGGCCTCA
ACATCACCGACCCCGCCCTGGAGAAGGTTGCCGAGCACGGCAGCAAGGTC
AGCTTGCGGTATGCTCTGCAATTACTCACCCCGGCTAGTATCCTTGCCAA
GGTGAATGGACGCCCAGGAGGTATCGAGGAAGCCGACGTGGCAGAGTGCG
AAGACCTGTTCCTTGATGCGCGGAGGAGCGCCACGATCGTGAACCAGGAT
AGTGAGAAGTACCTCAAATAAGCGGGACGTGGCATACTACTTGGCTGGAT
TTTTGGGGAGCAGGCAAGACGGGGTGTGAAGAGAAAGCGAACGAAACAAA
CAAACAAACACATACAAGAAAGCAATATGTATACCATGTCTGCAGGTCTT
ATTATTTTTTCCTAACTAAACCGGGAAGAGCGATTGCTTCTCCTATGAAT
GAGCTATTTTACGTTAATGTCAACTACCAGTATT
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Coding sequence (CDS) from alignment at ch6:3225689..3227622+

>KJC3_008842-T1 ID=KJC3_008842-T1|Name=KJC3_008842-T1|organism=Aspergillus niger KJC3|type=CDS|length=5508bp|location=Sequence derived from alignment at ch6:3225689..3227622+ (Aspergillus niger KJC3)
ATGGTCCAAATCAGTGAAGTGAAGGGCAACTCGCGCGAGAACAGAACCGC
GGCCCACACGCATATCAAGGGTCTTGGTCTACGACAAGATGGCACTGCGG
AGGCTTCAGGAGATGGTTTCGTTGGACAGGCAACTGCTCGTGAGGCATGC
GGTGTCGTTGTTGATCTGATCAAGGCGAAGAAGATGGCCGGTCGTGCCGT
CCTCCTGGCTGGTGGACCCGGAACTGGAAAGACTGCTCTGGCCCTCGCCG
TGTCGCAGGAGCTGGGAACCAAAGTCCCCTTCTGTCCGATCGTTGGTAGT
GAGATCTACTCTGCTGAGGTCAAGAAAACAGAGGCACTCATGGAGAACTT
CCGGAGGGCAATTGGTCTCCGTGTTCGCGAAACGAAGGAAGTATACGAAG
GTGAAGTCACGGAACTTACCCCCGAAGAGACGGAGAACCCTCTGGGAGGA
TACGGACGCACGATCAGCCATCTGATCATCGGCCTAAAGTCTGCCAAGGG
CACCAAGAAGCTGCGCCTGGACCCCAGCATCTACGAAGCCATCCAAAAGG
AGCGGGTCACCGTGGGAGACGTCATCTACATCGAAGCGAATACCGGAGCC
TGCAAGCGTGTCGGACGGTCCGATGCCTACGCCACCGAGTTCGATCTTGA
AGCAGAGGAATACGTGCCCGTACCGAAGGGAGAGGTTCACAAGAAGAAGG
AAATCGTCCAGGATGTGACGCTGCACGATCTGGACATGGCCAATGCGCGG
CCCCAGGGTGGACAGGATGTGATGAGCATGATGGGACAGCTCATGAAGCC
CAAGAAGACCGAAATCACGGAGAAGTTGCGCCAGGAGATCAACAAGGTCG
TCAACCGCTACATTGACCAGGGCGTTGCGGAGCTCGTTCCCGGTGTCCTC
TTCATCGACGAGGTTCACATGCTCGATATCGAATGCTTCACATACCTCAA
CCGGGCACTCGAATCCTCCATCTCCCCCATTGTCATCCTTGCCTCTAACC
GCGGCAACACGGTCATCCGCGGCACCGACGACATCTCCGCCGCCCACGGC
ATCCCTCCCGACCTTCTCGCCCGTCTCCTCATCATCCCCACCCACCCTTA
CTCTCCCGATGAGATCAAGACCATCATTCGCCTGCGCGCCAAGACAGAAG
GCCTCAACATCACCGACCCCGCCCTGGAGAAGGTTGCCGAGCACGGCAGC
AAGGTCAGCTTGCGGTATGCTCTGCAATTACTCACCCCGGCTAGTATCCT
TGCCAAGGTGAATGGACGCCCAGGAGGTATCGAGGAAGCCGACGTGGCAG
AGTGCGAAGACCTGTTCCTTGATGCGCGGAGGAGCGCCACGATCGTGAAC
CAGGATAGTGAGAAGTACCTCAAATAAATGGTCCAAATCAGTGAAGTGAA
GGGCAACTCGCGCGAGAACAGAACCGCGGCCCACACGCATATCAAGGGTC
TTGGTCTACGACAAGATGGCACTGCGGAGGCTTCAGGAGATGGTTTCGTT
GGACAGGCAACTGCTCGTGAGGCATGCGGTGTCGTTGTTGATCTGATCAA
GGCGAAGAAGATGGCCGGTCGTGCCGTCCTCCTGGCTGGTGGACCCGGAA
CTGGAAAGACTGCTCTGGCCCTCGCCGTGTCGCAGGAGCTGGGAACCAAA
GTCCCCTTCTGTCCGATCGTTGGTAGTGAGATCTACTCTGCTGAGGTCAA
GAAAACAGAGGCACTCATGGAGAACTTCCGGAGGGCAATTGGTCTCCGTG
TTCGCGAAACGAAGGAAGTATACGAAGGTGAAGTCACGGAACTTACCCCC
GAAGAGACGGAGAACCCTCTGGGAGGATACGGACGCACGATCAGCCATCT
GATCATCGGCCTAAAGTCTGCCAAGGGCACCAAGAAGCTGCGCCTGGACC
CCAGCATCTACGAAGCCATCCAAAAGGAGCGGGTCACCGTGGGAGACGTC
ATCTACATCGAAGCGAATACCGGAGCCTGCAAGCGTGTCGGACGGTCCGA
TGCCTACGCCACCGAGTTCGATCTTGAAGCAGAGGAATACGTGCCCGTAC
CGAAGGGAGAGGTTCACAAGAAGAAGGAAATCGTCCAGGATGTGACGCTG
CACGATCTGGACATGGCCAATGCGCGGCCCCAGGGTGGACAGGATGTGAT
GAGCATGATGGGACAGCTCATGAAGCCCAAGAAGACCGAAATCACGGAGA
AGTTGCGCCAGGAGATCAACAAGGTCGTCAACCGCTACATTGACCAGGGC
GTTGCGGAGCTCGTTCCCGGTGTCCTCTTCATCGACGAGGTTCACATGCT
CGATATCGAATGCTTCACATACCTCAACCGGGCACTCGAATCCTCCATCT
CCCCCATTGTCATCCTTGCCTCTAACCGCGGCAACACGGTCATCCGCGGC
ACCGACGACATCTCCGCCGCCCACGGCATCCCTCCCGACCTTCTCGCCCG
TCTCCTCATCATCCCCACCCACCCTTACTCTCCCGATGAGATCAAGACCA
TCATTCGCCTGCGCGCCAAGACAGAAGGCCTCAACATCACCGACCCCGCC
CTGGAGAAGGTTGCCGAGCACGGCAGCAAGGTCAGCTTGCGGTATGCTCT
GCAATTACTCACCCCGGCTAGTATCCTTGCCAAGGTGAATGGACGCCCAG
GAGGTATCGAGGAAGCCGACGTGGCAGAGTGCGAAGACCTGTTCCTTGAT
GCGCGGAGGAGCGCCACGATCGTGAACCAGGATAGTGAGAAGTACCTCAA
ATAAATGGTCCAAATCAGTGAAGTGAAGGGCAACTCGCGCGAGAACAGAA
CCGCGGCCCACACGCATATCAAGGGTCTTGGTCTACGACAAGATGGCACT
GCGGAGGCTTCAGGAGATGGTTTCGTTGGACAGGCAACTGCTCGTGAGGC
ATGCGGTGTCGTTGTTGATCTGATCAAGGCGAAGAAGATGGCCGGTCGTG
CCGTCCTCCTGGCTGGTGGACCCGGAACTGGAAAGACTGCTCTGGCCCTC
GCCGTGTCGCAGGAGCTGGGAACCAAAGTCCCCTTCTGTCCGATCGTTGG
TAGTGAGATCTACTCTGCTGAGGTCAAGAAAACAGAGGCACTCATGGAGA
ACTTCCGGAGGGCAATTGGTCTCCGTGTTCGCGAAACGAAGGAAGTATAC
GAAGGTGAAGTCACGGAACTTACCCCCGAAGAGACGGAGAACCCTCTGGG
AGGATACGGACGCACGATCAGCCATCTGATCATCGGCCTAAAGTCTGCCA
AGGGCACCAAGAAGCTGCGCCTGGACCCCAGCATCTACGAAGCCATCCAA
AAGGAGCGGGTCACCGTGGGAGACGTCATCTACATCGAAGCGAATACCGG
AGCCTGCAAGCGTGTCGGACGGTCCGATGCCTACGCCACCGAGTTCGATC
TTGAAGCAGAGGAATACGTGCCCGTACCGAAGGGAGAGGTTCACAAGAAG
AAGGAAATCGTCCAGGATGTGACGCTGCACGATCTGGACATGGCCAATGC
GCGGCCCCAGGGTGGACAGGATGTGATGAGCATGATGGGACAGCTCATGA
AGCCCAAGAAGACCGAAATCACGGAGAAGTTGCGCCAGGAGATCAACAAG
GTCGTCAACCGCTACATTGACCAGGGCGTTGCGGAGCTCGTTCCCGGTGT
CCTCTTCATCGACGAGGTTCACATGCTCGATATCGAATGCTTCACATACC
TCAACCGGGCACTCGAATCCTCCATCTCCCCCATTGTCATCCTTGCCTCT
AACCGCGGCAACACGGTCATCCGCGGCACCGACGACATCTCCGCCGCCCA
CGGCATCCCTCCCGACCTTCTCGCCCGTCTCCTCATCATCCCCACCCACC
CTTACTCTCCCGATGAGATCAAGACCATCATTCGCCTGCGCGCCAAGACA
GAAGGCCTCAACATCACCGACCCCGCCCTGGAGAAGGTTGCCGAGCACGG
CAGCAAGGTCAGCTTGCGGTATGCTCTGCAATTACTCACCCCGGCTAGTA
TCCTTGCCAAGGTGAATGGACGCCCAGGAGGTATCGAGGAAGCCGACGTG
GCAGAGTGCGAAGACCTGTTCCTTGATGCGCGGAGGAGCGCCACGATCGT
GAACCAGGATAGTGAGAAGTACCTCAAATAAATGGTCCAAATCAGTGAAG
TGAAGGGCAACTCGCGCGAGAACAGAACCGCGGCCCACACGCATATCAAG
GGTCTTGGTCTACGACAAGATGGCACTGCGGAGGCTTCAGGAGATGGTTT
CGTTGGACAGGCAACTGCTCGTGAGGCATGCGGTGTCGTTGTTGATCTGA
TCAAGGCGAAGAAGATGGCCGGTCGTGCCGTCCTCCTGGCTGGTGGACCC
GGAACTGGAAAGACTGCTCTGGCCCTCGCCGTGTCGCAGGAGCTGGGAAC
CAAAGTCCCCTTCTGTCCGATCGTTGGTAGTGAGATCTACTCTGCTGAGG
TCAAGAAAACAGAGGCACTCATGGAGAACTTCCGGAGGGCAATTGGTCTC
CGTGTTCGCGAAACGAAGGAAGTATACGAAGGTGAAGTCACGGAACTTAC
CCCCGAAGAGACGGAGAACCCTCTGGGAGGATACGGACGCACGATCAGCC
ATCTGATCATCGGCCTAAAGTCTGCCAAGGGCACCAAGAAGCTGCGCCTG
GACCCCAGCATCTACGAAGCCATCCAAAAGGAGCGGGTCACCGTGGGAGA
CGTCATCTACATCGAAGCGAATACCGGAGCCTGCAAGCGTGTCGGACGGT
CCGATGCCTACGCCACCGAGTTCGATCTTGAAGCAGAGGAATACGTGCCC
GTACCGAAGGGAGAGGTTCACAAGAAGAAGGAAATCGTCCAGGATGTGAC
GCTGCACGATCTGGACATGGCCAATGCGCGGCCCCAGGGTGGACAGGATG
TGATGAGCATGATGGGACAGCTCATGAAGCCCAAGAAGACCGAAATCACG
GAGAAGTTGCGCCAGGAGATCAACAAGGTCGTCAACCGCTACATTGACCA
GGGCGTTGCGGAGCTCGTTCCCGGTGTCCTCTTCATCGACGAGGTTCACA
TGCTCGATATCGAATGCTTCACATACCTCAACCGGGCACTCGAATCCTCC
ATCTCCCCCATTGTCATCCTTGCCTCTAACCGCGGCAACACGGTCATCCG
CGGCACCGACGACATCTCCGCCGCCCACGGCATCCCTCCCGACCTTCTCG
CCCGTCTCCTCATCATCCCCACCCACCCTTACTCTCCCGATGAGATCAAG
ACCATCATTCGCCTGCGCGCCAAGACAGAAGGCCTCAACATCACCGACCC
CGCCCTGGAGAAGGTTGCCGAGCACGGCAGCAAGGTCAGCTTGCGGTATG
CTCTGCAATTACTCACCCCGGCTAGTATCCTTGCCAAGGTGAATGGACGC
CCAGGAGGTATCGAGGAAGCCGACGTGGCAGAGTGCGAAGACCTGTTCCT
TGATGCGCGGAGGAGCGCCACGATCGTGAACCAGGATAGTGAGAAGTACC
TCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003678DNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RVB1KJC3_008842Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008842-T1KJC3_008842-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008842-T1.utr5p1KJC3_008842-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008842-T1.exon1KJC3_008842-T1.exon1Aspergillus niger KJC3exon
KJC3_008842-T1.exon2KJC3_008842-T1.exon2Aspergillus niger KJC3exon
KJC3_008842-T1.exon3KJC3_008842-T1.exon3Aspergillus niger KJC3exon
KJC3_008842-T1.exon4KJC3_008842-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008842-T1.cdsKJC3_008842-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008842-T1.utr3p1KJC3_008842-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041048
DBxrefInterPro:IPR010339
DBxrefInterPro:IPR003593
DBxrefPFAM:PF17856
DBxrefPFAM:PF06068
ProductRuvB ATP-dependent DNA helicase pontin
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3225689..3227622 +
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