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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3259884..3260709+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008857-T1 ID=KJC3_008857-T1|Name=KJC3_008857-T1|organism=Aspergillus niger KJC3|type=mRNA|length=826bp|location=Sequence derived from alignment at ch6:3259884..3260709+ (Aspergillus niger KJC3)
CAATAATTACCCCATCAACATCATATACCATCCAATAAATCATAAATCAT
AGCCCATCCACTATGCCTCTCCTCCACACCCTCCTAACCACCTTCCTGGC
TGCATCCACCACCGCCCTCGCAGCATCACCCAACCCCACCACCACCAGTA
GTACTACGACCACCTTCCCCAACACCCTCAACATCACCACCCTCACCGCG
CACAACAACCAATCCGTCCTCGAATGCTGGGCCCTCGACCCGGGCTACTC
CACCTCCGCCCAAGCCGGCGTCTCCGGCACCGCCATGCTCAATCTCGGCC
CCGTCACCAGCAACGCAACTAACCTCCTCATCCCCGGTGAATATAATGGC
GGCCTCCATAATGCTCCCACAATTCAGTACGAATAACCCCCCTTTTTTTA
CCAACCATGATTACCCTCTTTCCTCTTTTTTCTTCTAGGAATCAAATATA
AATACATAAATGTATACACAAAGTATATATTTTCTAATACAATAATAATA
ATGATAATGATAATAACAGATGGGTCATCTTCCTCTCCGGCGTCGCGCAC
ATCACATTACCGAACTCGACGGACGAGGCGTGGATAGTCGGGGGTAAGAA
CGGGGCGATTCTGGCGCTGGATACGGCGGAGGTTAGTGCTTTGGGGCATT
CTACTACTTATCCGACGGAGGAGAGCACCGTGGTGTTGGAGGTCGCGTTG
AAGGAGATTCCCGGGCATAGGGTTTTGCATGGGGGGGCTTGTGGGGAGGA
GGAATTGTTGTAGATAATAGTTAGTAGTTTTTCGGTTGTTTACTAAATAA
GATGTTAGATAGTATGGTTATCATGG back to topCoding sequence (CDS) from alignment at ch6:3259884..3260709+ >KJC3_008857-T1 ID=KJC3_008857-T1|Name=KJC3_008857-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch6:3259884..3260709+ (Aspergillus niger KJC3)
ATGCCTCTCCTCCACACCCTCCTAACCACCTTCCTGGCTGCATCCACCAC
CGCCCTCGCAGCATCACCCAACCCCACCACCACCAGTAGTACTACGACCA
CCTTCCCCAACACCCTCAACATCACCACCCTCACCGCGCACAACAACCAA
TCCGTCCTCGAATGCTGGGCCCTCGACCCGGGCTACTCCACCTCCGCCCA
AGCCGGCGTCTCCGGCACCGCCATGCTCAATCTCGGCCCCGTCACCAGCA
ACGCAACTAACCTCCTCATCCCCGGTGAATATAATGGCGGCCTCCATAAT
GCTCCCACAATTCAATGGGTCATCTTCCTCTCCGGCGTCGCGCACATCAC
ATTACCGAACTCGACGGACGAGGCGTGGATAGTCGGGGGTAAGAACGGGG
CGATTCTGGCGCTGGATACGGCGGAGGTTAGTGCTTTGGGGCATTCTACT
ACTTATCCGACGGAGGAGAGCACCGTGGTGTTGGAGGTCGCGTTGAAGGA
GATTCCCGGGCATAGGGTTTTGCATGGGGGGGCTTGTGGGGAGGAGGAAT
TGTTGTAGATGCCTCTCCTCCACACCCTCCTAACCACCTTCCTGGCTGCA
TCCACCACCGCCCTCGCAGCATCACCCAACCCCACCACCACCAGTAGTAC
TACGACCACCTTCCCCAACACCCTCAACATCACCACCCTCACCGCGCACA
ACAACCAATCCGTCCTCGAATGCTGGGCCCTCGACCCGGGCTACTCCACC
TCCGCCCAAGCCGGCGTCTCCGGCACCGCCATGCTCAATCTCGGCCCCGT
CACCAGCAACGCAACTAACCTCCTCATCCCCGGTGAATATAATGGCGGCC
TCCATAATGCTCCCACAATTCAATGGGTCATCTTCCTCTCCGGCGTCGCG
CACATCACATTACCGAACTCGACGGACGAGGCGTGGATAGTCGGGGGTAA
GAACGGGGCGATTCTGGCGCTGGATACGGCGGAGGTTAGTGCTTTGGGGC
ATTCTACTACTTATCCGACGGAGGAGAGCACCGTGGTGTTGGAGGTCGCG
TTGAAGGAGATTCCCGGGCATAGGGTTTTGCATGGGGGGGCTTGTGGGGA
GGAGGAATTGTTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008857-T1.utr5p1 | KJC3_008857-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008857-T1.utr3p1 | KJC3_008857-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3259884..3260709 + |
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