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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3524081..3525269+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008939-T1 ID=KJC3_008939-T1|Name=KJC3_008939-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1189bp|location=Sequence derived from alignment at ch6:3524081..3525269+ (Aspergillus niger KJC3)
TATCAGCTCCATTAAGGTATAAAGCAACAACGGAATGACTCCAATAGGTA
CCAAACTTCAACATTCAGCTTAAACCTTGGGGACACAATGGCTTCTACAA
TGCTTGCATCTTTCCCTGGCGCTGCTACCAGCTACACAACCTCCCATCTG
AATAAGGACCCGGCTCCATTACTGGCTGAAAATGACAACTATACATTTGA
GCAGCTGGTTCATGACTTGAGAAGCTACCTGGGTAGCTCTCGAGGCATTG
ATGGCGAGAATGTCGACCACAAGGTTCTGATTGCCTTCATGTCCAAATAC
GCTTCCAATCCCAATGACTGGTCACGATTTGCACGCAACGATGTGAGCAA
GAACTATACTCGCAACCTGGTGGAGGATATCAATGGTCGTGCCAACCTGG
TTAGTTCTTTACTTGCAAACCATTGTGGTGGTTGACGATTAACACGTTCC
CAGTTGGTTCTGGTCTGGAACCCCCAAAAAGGCTCGCCCATCCATGATCA
CGCAAATGCTCACTGCATCATGAAGATTCTCGGGGGAGAATTGAATGAAG
TGATATACGATACGCCAGATCCCGCACGAGGCCATGATGCGCCTTTGACG
GTCAAGCAAGAGACGACGTACAAGACCGATGAAGTTGCGTATATCTGTGA
CCAGATCGGACTGCATAGGGTCATGAATCCCCAGAAAGATCAGGTTGCTG
TTTCTTTGCACTGTAAGTTGGCCTCCACCCTGCTAAAACCATGGTTGTCT
GACGCTTCTGCAGTGTATACGCCGCCCAATGCTGCGGACTTTGGGTACAA
CATCTATGATCGCGAAACTGGTCGGAGCAGCCATGTTTATCAGGCGTCCT
AGGAGGGTGGGAGGAAATTCGGACAAGAACAGACGAGTGCAGGACACTCG
CTATGATTCATGACTAGCGTTGATAATCTGTATGCATTTAAAGTGGGACT
TGGCAGGCCTAAGGCTCGATATCTCAAGGGATATGGCTATTGGTATCATT
GTAGCGCAATTGTCTGGGTTGGTTTGAGGCGAACAAAGCCATGCATAGTA
CTAATCAGTTTCAATGTCTCTCTAGAAGCAGTGCCGCTCTTTAGGTCGAC
TGTTGCAGTATGGATAGAAATGGTCTTATTCCACAGAGTGTAGTATTAAT
GAGCCATTTTAAATTGCATCTTAGATGCGCTCCGCGAAG back to topCoding sequence (CDS) from alignment at ch6:3524081..3525269+ >KJC3_008939-T1 ID=KJC3_008939-T1|Name=KJC3_008939-T1|organism=Aspergillus niger KJC3|type=CDS|length=1980bp|location=Sequence derived from alignment at ch6:3524081..3525269+ (Aspergillus niger KJC3)
ATGGCTTCTACAATGCTTGCATCTTTCCCTGGCGCTGCTACCAGCTACAC
AACCTCCCATCTGAATAAGGACCCGGCTCCATTACTGGCTGAAAATGACA
ACTATACATTTGAGCAGCTGGTTCATGACTTGAGAAGCTACCTGGGTAGC
TCTCGAGGCATTGATGGCGAGAATGTCGACCACAAGGTTCTGATTGCCTT
CATGTCCAAATACGCTTCCAATCCCAATGACTGGTCACGATTTGCACGCA
ACGATGTGAGCAAGAACTATACTCGCAACCTGGTGGAGGATATCAATGGT
CGTGCCAACCTGTTGGTTCTGGTCTGGAACCCCCAAAAAGGCTCGCCCAT
CCATGATCACGCAAATGCTCACTGCATCATGAAGATTCTCGGGGGAGAAT
TGAATGAAGTGATATACGATACGCCAGATCCCGCACGAGGCCATGATGCG
CCTTTGACGGTCAAGCAAGAGACGACGTACAAGACCGATGAAGTTGCGTA
TATCTGTGACCAGATCGGACTGCATAGGGTCATGAATCCCCAGAAAGATC
AGGTTGCTGTTTCTTTGCACTTGTATACGCCGCCCAATGCTGCGGACTTT
GGGTACAACATCTATGATCGCGAAACTGGTCGGAGCAGCCATGTTTATCA
GGCGTCCTAGATGGCTTCTACAATGCTTGCATCTTTCCCTGGCGCTGCTA
CCAGCTACACAACCTCCCATCTGAATAAGGACCCGGCTCCATTACTGGCT
GAAAATGACAACTATACATTTGAGCAGCTGGTTCATGACTTGAGAAGCTA
CCTGGGTAGCTCTCGAGGCATTGATGGCGAGAATGTCGACCACAAGGTTC
TGATTGCCTTCATGTCCAAATACGCTTCCAATCCCAATGACTGGTCACGA
TTTGCACGCAACGATGTGAGCAAGAACTATACTCGCAACCTGGTGGAGGA
TATCAATGGTCGTGCCAACCTGTTGGTTCTGGTCTGGAACCCCCAAAAAG
GCTCGCCCATCCATGATCACGCAAATGCTCACTGCATCATGAAGATTCTC
GGGGGAGAATTGAATGAAGTGATATACGATACGCCAGATCCCGCACGAGG
CCATGATGCGCCTTTGACGGTCAAGCAAGAGACGACGTACAAGACCGATG
AAGTTGCGTATATCTGTGACCAGATCGGACTGCATAGGGTCATGAATCCC
CAGAAAGATCAGGTTGCTGTTTCTTTGCACTTGTATACGCCGCCCAATGC
TGCGGACTTTGGGTACAACATCTATGATCGCGAAACTGGTCGGAGCAGCC
ATGTTTATCAGGCGTCCTAGATGGCTTCTACAATGCTTGCATCTTTCCCT
GGCGCTGCTACCAGCTACACAACCTCCCATCTGAATAAGGACCCGGCTCC
ATTACTGGCTGAAAATGACAACTATACATTTGAGCAGCTGGTTCATGACT
TGAGAAGCTACCTGGGTAGCTCTCGAGGCATTGATGGCGAGAATGTCGAC
CACAAGGTTCTGATTGCCTTCATGTCCAAATACGCTTCCAATCCCAATGA
CTGGTCACGATTTGCACGCAACGATGTGAGCAAGAACTATACTCGCAACC
TGGTGGAGGATATCAATGGTCGTGCCAACCTGTTGGTTCTGGTCTGGAAC
CCCCAAAAAGGCTCGCCCATCCATGATCACGCAAATGCTCACTGCATCAT
GAAGATTCTCGGGGGAGAATTGAATGAAGTGATATACGATACGCCAGATC
CCGCACGAGGCCATGATGCGCCTTTGACGGTCAAGCAAGAGACGACGTAC
AAGACCGATGAAGTTGCGTATATCTGTGACCAGATCGGACTGCATAGGGT
CATGAATCCCCAGAAAGATCAGGTTGCTGTTTCTTTGCACTTGTATACGC
CGCCCAATGCTGCGGACTTTGGGTACAACATCTATGATCGCGAAACTGGT
CGGAGCAGCCATGTTTATCAGGCGTCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008939-T1.utr5p1 | KJC3_008939-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008939-T1.utr3p1 | KJC3_008939-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR014710 |
| DBxref | InterPro:IPR010300 |
| DBxref | PFAM:PF05995 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3524081..3525269 + |
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