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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3579446..3581078- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008958-T1 ID=KJC3_008958-T1|Name=KJC3_008958-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1633bp|location=Sequence derived from alignment at ch6:3579446..3581078- (Aspergillus niger KJC3)
TCCAGTCAACTCCATCCTACAGCCAGTGAGTATGCTACCAACAGCACGGC
ATCCCCGAACCCCCACTAACTAATCTCGTTTATGCCTGTCAGCAACCTCA
AACAGGAAACACTCCCCCCCCTCTCCACAGGGTCCAGACATAAGCAAAAG
CCCAAGACACACAGAGGTAGCTAAAGGCTACCTGCCTCACCATGGTACGT
TGACGCCTCCGTCTTTTCACCGCAACCAATGGGGCGAGTGATTGGAGTCC
CCATCAAGGCCACTAAGGAAGGGGGGTACAGACAGACACACACTAGTATG
TGCCTTAGTGGGCGCGTTAGCCTAAGGGTGTCTGTCGTGTTTTACGAAAC
AAGAACTTAACACGGAGAAAAAAACAAAAAATAACTATGTGTCGAGCTAG
CCGCCTAAACTTTCCAAAAGTGCCAAACAAGCCCTGATCGTCTCACATCT
GCGGGCCACGGGGACGTGCCACACCCTGAAGGATCTCGAGAAAATGATCC
CATCGGTGGCCTCGATCAATGGGATGCAAGTGAAGGAACACATACAGGAA
TTGACGGATGAGGGACGGATCCGGGTTGAGAAGATCGGCAGTGGAAATTG
GTATTGGTGTTTTGGGGGAGAGGAGAAGAAAGAGCGGGAGGAGCGTGTTC
GGAGGTTACGGAGGGAGGTAGATCGGGTCCGAGAGAATTGGGAAGGTGCG
GAGGCTAGATTGTCTGCGCGGATGCAGGCGAGGATGCAGGAGGAGGCAGA
AGAAGGGGAGCATGGGGATGGGGGTGGTGAGGAGGAGCGCCGGAGATTGA
TGGAGCAGAAGGCAGTGCTCGAGCGGGAGACACATCAACTGCAGGGGGAG
TGGATGGCGTTGGCGACGAGTTCGGAGGGGAAAAGCTTACCGCAGATTAA
AGAGGAGACGGAAGAGTATCGGCGTCTGGCGCATCAGTGGACGGATAACA
TCTACATCTTGGAAGGGTATGTGGATAAGGTGACCGGAGGGGATCGGGAA
GTGTTGCGGGCAGTGCAACGGGAATGTTATGGGGAAGAATACGTGGAGGG
GGAAGGATTGCGTGAGCTAGAGATGGAGAGGGAGCCGGAGTCCTGATCAC
TAATGGATGAATAGGATGTGGTTGATGCTTATGAATTACGGTGGTGGTGG
TGGTGGTAAGTAGTTGTTGTTATTAAGATGGGCCGTCATGAATCCATCAA
ATCCATCTGTCGGGAAGTTTGTCAGCGGCTTCTCATCACTAGTTAACTAG
TGGTTAGCCAACTAACTAGTCGTCAAGTTAACTTGGTCCAGTCGAGAGGG
ACTAACTCACTAGTTCAGTTTGATTCGAGTTAATGAGCCACGAGGGGTGG
TCAATGTGACTAGTCAAGGACAGGAAAATGGGAGAAGAATAATACTAATC
ATCATTCTCACCAGAACCATAGTTTCCACCCGGCAGGAAACCAAAGCCCA
GTATCAACTTAGATATAATTAGGTGGAAAGTCGATTTGCTCCGAGTGGAA
ACCGCCGAGCCACGAACGGCCCAAGAGAAGCTTGACCTCGACCACAAGCC
GGCTGCTTATCTCCATCCCTCCATCATCATCTTCTTCTCCTCCATCGATT
CCTCTGCCTCTACTCCTACTGCTTGCTGACCCT back to topCoding sequence (CDS) from alignment at ch6:3579446..3581078- >KJC3_008958-T1 ID=KJC3_008958-T1|Name=KJC3_008958-T1|organism=Aspergillus niger KJC3|type=CDS|length=603bp|location=Sequence derived from alignment at ch6:3579446..3581078- (Aspergillus niger KJC3)
ATGATCCCATCGGTGGCCTCGATCAATGGGATGCAAGTGAAGGAACACAT
ACAGGAATTGACGGATGAGGGACGGATCCGGGTTGAGAAGATCGGCAGTG
GAAATTGGTATTGGTGTTTTGGGGGAGAGGAGAAGAAAGAGCGGGAGGAG
CGTGTTCGGAGGTTACGGAGGGAGGTAGATCGGGTCCGAGAGAATTGGGA
AGGTGCGGAGGCTAGATTGTCTGCGCGGATGCAGGCGAGGATGCAGGAGG
AGGCAGAAGAAGGGGAGCATGGGGATGGGGGTGGTGAGGAGGAGCGCCGG
AGATTGATGGAGCAGAAGGCAGTGCTCGAGCGGGAGACACATCAACTGCA
GGGGGAGTGGATGGCGTTGGCGACGAGTTCGGAGGGGAAAAGCTTACCGC
AGATTAAAGAGGAGACGGAAGAGTATCGGCGTCTGGCGCATCAGTGGACG
GATAACATCTACATCTTGGAAGGGTATGTGGATAAGGTGACCGGAGGGGA
TCGGGAAGTGTTGCGGGCAGTGCAACGGGAATGTTATGGGGAAGAATACG
TGGAGGGGGAAGGATTGCGTGAGCTAGAGATGGAGAGGGAGCCGGAGTCC
TGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008958-T1.utr3p1 | KJC3_008958-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR040453 |
| DBxref | PFAM:PF03962 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3579446..3581078 - |
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