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KJC3_008960-T1, KJC3_008960-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008960-T1
Unique NameKJC3_008960-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3584377..3587185+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008960-T1 ID=KJC3_008960-T1|Name=KJC3_008960-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2809bp|location=Sequence derived from alignment at ch6:3584377..3587185+ (Aspergillus niger KJC3)
GTCATGTGAGAGCAAGTCATTCCATCTACTGATTACAACAACATCTCTGC
CTTGTCTGGTTATATCTTCACGGAGCTCGGAGAACAGCTCTGTTAGCCTA
ATGAATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCT
CGACCTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCG
GCGCCTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAG
TCAGGCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATG
ATGAAGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCAC
TATGAGGGCCGATTGTATGTTACACCCATCCTGTGCCTGGCTCCAATTAA
CGGTAGACAGCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGG
GATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGC
ATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCT
CCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACC
TCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCAC
ACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGT
CGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAG
CCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCC
CGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCAC
ACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATC
CGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGC
TGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCC
CAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTG
CGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCG
GATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCG
GTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCG
CTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATG
GCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAAC
TTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACC
GGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGAT
CAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGA
TGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAA
CCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCG
CAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCT
AAGCATACGATCAAGAAAATCTACGAAGGCACCAAATATAGCACAATAGT
AAAAATCGTTTCATTCATCTATAATACATCATGTTCATGCTAGGCATATC
CAGATATGCGTAGCGTTTACTCGTTCCTGATCTGATGCTCGCCAATAGCA
TCTTCATCCTCCGCGGAGAACCGCTCATAAGCACTGCGGTTCAAATTGGA
ATGCTTCAAGTTTCTGGACTCTCCCTTGGCACCAGGGTGGTTGGTGCCGA
TCAAGGTCCTCTTGGACTCGCCCTCAGCCGGGAAACTGTTACCGGTTCCG
GTGATGACTTCGCCTGAGGGAGCCATGTCTCTTGTGCTGCGAGGCATGTC
GGTGGAGTTGTCGGCGGCAAAAGCGGAGGTCGGGTGAGCGACACCGTAGT
TATCAAACTGGGGGTCTTCGGAGCATTGGTCGGGGCGCGGGACGGAGGGG
ATGGTGTTCATGATGCCTGCATCATTGGGAATGCGAGTGCCCTCGGGGGC
CATGTCCTCGAGACGTCCGCCGCGGTGAGGATCAGAAGACATTTTGAGTG
GTAGATGTGGTATTTGGGCTTGGTGATGTTTTCGCGTGGAATGGAGTGTT
TTGGATTATTAAACAACTTTGTTCGAGTTTATTCTGGATTGGAAATAGAC
CGCAAGACCGGCTTGGGTTTATATAGCTGATGAGTTGGGCTGCACTGGCA
TCTGATGTCACCGTCCAGGCGCGGATGGAGTCTGGGCCATGATGAGGCTA
TGATATCAGCAGGGTCCCAGCGTGCATCTGAGCACAGGAAACCAGCAAAT
CGATGATGAAACATGCCAGGATCTATGGAATACTCCAACCCAAATCTAGC
CGATGGTTCCATCCACCGCAGTTCTCGAAGCTGGAGACGAAGGCAAATCA
CGTCAGTCCCCAAGGTACCGCTATACTAAGTACCTTGACATATCATCACT
GGCCCTTTCGGCACCGCCACATCATGGTCTGCAGCATGGCAGCCTTCTCT
AACAGTACGCCATTCATAGTCGGTCTGTCTTCATTCCCGACTTCAGACCT
GCTCTTCGAGCCTTCTTTATTCTGATTAACGTCATCGCCATGGCCATTCC
TGACTCAGCATTCGGCATCCTCCCCAGCCAATCAGGAGGCATCCTCAGAA
ACAGTTCCTTTCTGCTTCACATCAACAACCACCATCTGTGCAATAGTACT
CGATAAAGG
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Coding sequence (CDS) from alignment at ch6:3584377..3587185+

>KJC3_008960-T1 ID=KJC3_008960-T1|Name=KJC3_008960-T1|organism=Aspergillus niger KJC3|type=CDS|length=2904bp|location=Sequence derived from alignment at ch6:3584377..3587185+ (Aspergillus niger KJC3)
ATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGAC
CTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGC
CTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAG
GCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGA
AGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATG
AGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGG
GATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGC
ATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCT
CCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACC
TCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCAC
ACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGT
CGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAG
CCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCC
CGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCAC
ACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATC
CGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGC
TGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCC
CAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTG
CGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCG
GATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCG
GTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCG
CTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATG
GCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAAC
TTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACC
GGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGAT
CAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGA
TGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAA
CCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCG
CAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCT
AAATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCG
ACCTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGC
GCCTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTC
AGGCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGAT
GAAGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTA
TGAGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCT
GGGATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTG
GCATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTAC
CTCCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAA
CCTCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATC
ACACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTT
GTCGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGA
AGCCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTC
CCCGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCC
ACACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATA
TCCGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGAT
GCTGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCG
CCCAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCG
TGCGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCT
CGGATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTT
CGGTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCAC
CGCTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTA
TGGCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGA
ACTTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGA
CCGGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGG
ATCAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGA
GATGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGG
AACCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGAC
CGCAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGG
CTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008960KJC3_008960Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008960-T1.utr5p1KJC3_008960-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008960-T1.exon1KJC3_008960-T1.exon1Aspergillus niger KJC3exon
KJC3_008960-T1.exon2KJC3_008960-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008960-T1.cdsKJC3_008960-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008960-T1.utr3p1KJC3_008960-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008960-T1KJC3_008960-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3584377..3587185 +
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