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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4029468..4031271- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009029-T1 ID=KJC3_009029-T1|Name=KJC3_009029-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1804bp|location=Sequence derived from alignment at ch6:4029468..4031271- (Aspergillus niger KJC3)
CTCCTGAGCGGTCTGATGTAGTCACGTGATGAGCGCTCTGCCTAAGTCTG
CGCAGTGGATGAACCGATGTTGTTAGCTTAATACCTGTGGGCTTTGATTT
TATCGCATGAATTGCTCTTCAGATTTATCTTCCCCAATCGTCCTCAATCG
TCCTCAATCGTCCTCAATCGTCCTCAATCGTCCTCAATCGTCCTCAATCG
TCCTCAATCGTCTCCAATCGTCCTCAATCCCGGTCGTCATCATTCGTAAC
GGACACATGGCCAACACGCCAAATATACACCCTGCATGCGACTGTGTTGC
GCATCAGATGGACTACCAAGACTGGCCAAGAGAAAATGCAGAGATCAGAA
TTGCTTCTTGTATGCGAGTATGCCCTTACTGTGCGAAAAGGCACTCAAAC
GCTAGCCGACTTCGAAAGCATCTGCGTCAGCGTAAATACCGTGAGCGGAA
TCTTTCTATCGCATCAGAGCGCCCTGGAGCTGTCGGGGTCGGGCACTTTG
CCCCAGACAATCAACGAGAAGCCTACAAAACTTCTCAGAACCGGGACAGT
ATCGGCAATGACTCGAAGGATTCTGGTCCGATTTTGTCTGTGGTAACCGT
TCAATTCGAATCCCAGAAAGACCTGAGTTCCATCTTGCGTGAAATTCAGA
CCAACTTCGGCCCTAAATATGGCGTTCTCTTCAAATGCCATCTTTCTCAC
TGGAACCGCATGTCAGATCAAAATCAAGATCTCTGGTTGAAATCTACATC
ATCGGCCCCTCGCCTCCTTGACGGCTCCCATTGCTGGCGGGGTCGAGCTC
CCCTCGCTCGCGAGCTCTTTATGGACACTATCAAGGAAATATCAACCGAA
AATTCGACGACTCAGAAAAGCTCTGAATCTCGATTTCGGGCTAATTTCCA
GGGTGAAGTAGATGAGGCATTTGACCCGTATCTTGTTCTCTCACAGCTTA
TAGACCCTGACCCAAATAAACCTGCATTTCTTACTGGCCTACGGCTACCG
TCCGTAGACCAGTTCGGGTTTCGCTCACCGTGTGATATTTCTTCTATTAT
AGAACCGTTCGATGAGACGAACAATCAGGTTAATTTGACCCCAAAATACT
CTTTTGTGGACTTGCATATCGGTAGGTCAACATCACCGATAGCCTCGATG
ATAAATAACGCTTCTGCTAATTCTTCATAAGATTATGGTGCGGACGGATT
GGCAACAGTGATTGGTGAATGCCGAAAAATATGGCTACTTTATCCGCCCA
CGGATAACAATTTGAATGCTATGAAGTCCATTGACGGCCAACGTGGAAAA
TTACTTCGCTTGGTGCATCAATTAGAGGGCGGTGTTCTTGTGGAGACAAC
AGCATCACATGCGATATTCATTCCGGCAGGCTGTGCTCATGCCACATTCA
CTCTTCAGGGTGGTTTCCTAGTTACCAAAGATTTCACGACTGTGAAGTCT
CTGAATGCGATTGCAAACTTCATCGTCTATGGACTCGATGAGACTTTGCC
CACAGAGGCTCGAGAGGTTTGCTTCGATTGGTTTGAACGCTGTTTAGATG
TTACCTTGGCCCAGCAGCATGTGATTACTGCAATCTTTGCATGGTTGAAG
GCAGAAGCAAAACTAGCAAGTTGGGCATCGACTCATCGAAGGTGGCGAGT
TAATGTTAGGCGTTTGTGGGAGCATCACTGTCAGGACTCAGTGGTCAGCT
GCCCATGTGACCTTCAAGAGCCGACTTCATCATTTTTCCAACATTTCTCT
TCCGTCCACATGGGCTCATTGCTTTCATCATCTCAACTACGACGCTGTCG
GTGA back to topCoding sequence (CDS) from alignment at ch6:4029468..4031271- >KJC3_009029-T1 ID=KJC3_009029-T1|Name=KJC3_009029-T1|organism=Aspergillus niger KJC3|type=CDS|length=4050bp|location=Sequence derived from alignment at ch6:4029468..4031271- (Aspergillus niger KJC3)
ATTATGGTGCGGACGGATTGGCAACAGTGATTGGTGAATGCCGAAAAATA
TGGCTACTTTATCCGCCCACGGATAACAATTTGAATGCTATGAAGTCCAT
TGACGGCCAACGTGGAAAATTACTTCGCTTGGTGCATCAATTAGAGGGCG
GTGTTCTTGTGGAGACAACAGCATCACATGCGATATTCATTCCGGCAGGC
TGTGCTCATGCCACATTCACTCTTCAGGGTGGTTTCCTAGTTACCAAAGA
TTTCACGACTGTGAAGTCTCTGAATGCGATTGCAAACTTCATCGTCTATG
GACTCGATGAGACTTTGCCCACAGAGGCTCGAGAGGTTTGCTTCGATTGG
TTTGAACGCTGTTTAGATGTTACCTTGGCCCAGCAGCATGTGATTACTGC
AATCTTTGCATGGTTGAAGGCAGAAGCAAAACTAGCAAGTTGGGCATCGA
CTCATCGAAGGTGGCGAGTTAATGTTAGGCGTTTGTGGGAGCATCACTGT
CAGGACTCAGTGGTCAGCTGCCCATGTGACCTTCAAGAGCCGACTTCATC
ATTTTTCCAACATTTCTCTTCCGTCCACATGGGCTCATTGCTTTCATCAT
CTCAACTACGACGCTGTCGGTGACATCTGCGTCAGCGTAAATACCGTGAG
CGGAATCTTTCTATCGCATCAGAGCGCCCTGGAGCTGTCGGGGTCGGGCA
CTTTGCCCCAGACAATCAACGAGAAGCCTACAAAACTTCTCAGAACCGGG
ACAGTATCGGCAATGACTCGAAGGATTCTGGTCCGATTTTGTCTGTGGTA
ACCGTTCAATTCGAATCCCAGAAAGACCTGAGTTCCATCTTGCGTGAAAT
TCAGACCAACTTCGGCCCTAAATATGGCGTTCTCTTCAAATGCCATCTTT
CTCACTGGAACCGCATGTCAGATCAAAATCAAGATCTCTGGTTGAAATCT
ACATCATCGGCCCCTCGCCTCCTTGACGGCTCCCATTGCTGGCGGGGTCG
AGCTCCCCTCGCTCGCGAGCTCTTTATGGACACTATCAAGGAAATATCAA
CCGAAAATTCGACGACTCAGAAAAGCTCTGAATCTCGATTTCGGGCTAAT
TTCCAGGGTGAAGTAGATGAGGCATTTGACCCGTATCTTGTTCTCTCACA
GCTTATAGACCCTGACCCAAATAAACCTGCATTTCTTACTGGCCTACGGC
TACCGTCCGTAGACCAGTTCGGGTTTCGCTCACCGTGTGATATTTCTTCT
ATTATAGAACCGTTCGATGAGACGAACAATCAGGTTAATTTGACCCCAAA
ATACTCTTTTGTGGACTTGCATATCGATGCAGAGATCAGAATTGCTTCTT
ATTATGGTGCGGACGGATTGGCAACAGTGATTGGTGAATGCCGAAAAATA
TGGCTACTTTATCCGCCCACGGATAACAATTTGAATGCTATGAAGTCCAT
TGACGGCCAACGTGGAAAATTACTTCGCTTGGTGCATCAATTAGAGGGCG
GTGTTCTTGTGGAGACAACAGCATCACATGCGATATTCATTCCGGCAGGC
TGTGCTCATGCCACATTCACTCTTCAGGGTGGTTTCCTAGTTACCAAAGA
TTTCACGACTGTGAAGTCTCTGAATGCGATTGCAAACTTCATCGTCTATG
GACTCGATGAGACTTTGCCCACAGAGGCTCGAGAGGTTTGCTTCGATTGG
TTTGAACGCTGTTTAGATGTTACCTTGGCCCAGCAGCATGTGATTACTGC
AATCTTTGCATGGTTGAAGGCAGAAGCAAAACTAGCAAGTTGGGCATCGA
CTCATCGAAGGTGGCGAGTTAATGTTAGGCGTTTGTGGGAGCATCACTGT
CAGGACTCAGTGGTCAGCTGCCCATGTGACCTTCAAGAGCCGACTTCATC
ATTTTTCCAACATTTCTCTTCCGTCCACATGGGCTCATTGCTTTCATCAT
CTCAACTACGACGCTGTCGGTGACATCTGCGTCAGCGTAAATACCGTGAG
CGGAATCTTTCTATCGCATCAGAGCGCCCTGGAGCTGTCGGGGTCGGGCA
CTTTGCCCCAGACAATCAACGAGAAGCCTACAAAACTTCTCAGAACCGGG
ACAGTATCGGCAATGACTCGAAGGATTCTGGTCCGATTTTGTCTGTGGTA
ACCGTTCAATTCGAATCCCAGAAAGACCTGAGTTCCATCTTGCGTGAAAT
TCAGACCAACTTCGGCCCTAAATATGGCGTTCTCTTCAAATGCCATCTTT
CTCACTGGAACCGCATGTCAGATCAAAATCAAGATCTCTGGTTGAAATCT
ACATCATCGGCCCCTCGCCTCCTTGACGGCTCCCATTGCTGGCGGGGTCG
AGCTCCCCTCGCTCGCGAGCTCTTTATGGACACTATCAAGGAAATATCAA
CCGAAAATTCGACGACTCAGAAAAGCTCTGAATCTCGATTTCGGGCTAAT
TTCCAGGGTGAAGTAGATGAGGCATTTGACCCGTATCTTGTTCTCTCACA
GCTTATAGACCCTGACCCAAATAAACCTGCATTTCTTACTGGCCTACGGC
TACCGTCCGTAGACCAGTTCGGGTTTCGCTCACCGTGTGATATTTCTTCT
ATTATAGAACCGTTCGATGAGACGAACAATCAGGTTAATTTGACCCCAAA
ATACTCTTTTGTGGACTTGCATATCGATGCAGAGATCAGAATTGCTTCTT
ATTATGGTGCGGACGGATTGGCAACAGTGATTGGTGAATGCCGAAAAATA
TGGCTACTTTATCCGCCCACGGATAACAATTTGAATGCTATGAAGTCCAT
TGACGGCCAACGTGGAAAATTACTTCGCTTGGTGCATCAATTAGAGGGCG
GTGTTCTTGTGGAGACAACAGCATCACATGCGATATTCATTCCGGCAGGC
TGTGCTCATGCCACATTCACTCTTCAGGGTGGTTTCCTAGTTACCAAAGA
TTTCACGACTGTGAAGTCTCTGAATGCGATTGCAAACTTCATCGTCTATG
GACTCGATGAGACTTTGCCCACAGAGGCTCGAGAGGTTTGCTTCGATTGG
TTTGAACGCTGTTTAGATGTTACCTTGGCCCAGCAGCATGTGATTACTGC
AATCTTTGCATGGTTGAAGGCAGAAGCAAAACTAGCAAGTTGGGCATCGA
CTCATCGAAGGTGGCGAGTTAATGTTAGGCGTTTGTGGGAGCATCACTGT
CAGGACTCAGTGGTCAGCTGCCCATGTGACCTTCAAGAGCCGACTTCATC
ATTTTTCCAACATTTCTCTTCCGTCCACATGGGCTCATTGCTTTCATCAT
CTCAACTACGACGCTGTCGGTGACATCTGCGTCAGCGTAAATACCGTGAG
CGGAATCTTTCTATCGCATCAGAGCGCCCTGGAGCTGTCGGGGTCGGGCA
CTTTGCCCCAGACAATCAACGAGAAGCCTACAAAACTTCTCAGAACCGGG
ACAGTATCGGCAATGACTCGAAGGATTCTGGTCCGATTTTGTCTGTGGTA
ACCGTTCAATTCGAATCCCAGAAAGACCTGAGTTCCATCTTGCGTGAAAT
TCAGACCAACTTCGGCCCTAAATATGGCGTTCTCTTCAAATGCCATCTTT
CTCACTGGAACCGCATGTCAGATCAAAATCAAGATCTCTGGTTGAAATCT
ACATCATCGGCCCCTCGCCTCCTTGACGGCTCCCATTGCTGGCGGGGTCG
AGCTCCCCTCGCTCGCGAGCTCTTTATGGACACTATCAAGGAAATATCAA
CCGAAAATTCGACGACTCAGAAAAGCTCTGAATCTCGATTTCGGGCTAAT
TTCCAGGGTGAAGTAGATGAGGCATTTGACCCGTATCTTGTTCTCTCACA
GCTTATAGACCCTGACCCAAATAAACCTGCATTTCTTACTGGCCTACGGC
TACCGTCCGTAGACCAGTTCGGGTTTCGCTCACCGTGTGATATTTCTTCT
ATTATAGAACCGTTCGATGAGACGAACAATCAGGTTAATTTGACCCCAAA
ATACTCTTTTGTGGACTTGCATATCGATGCAGAGATCAGAATTGCTTCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009029-T1.utr5p1 | KJC3_009029-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003347 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4029468..4031271 - |
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