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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4036620..4038133+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009030-T1 ID=KJC3_009030-T1|Name=KJC3_009030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1514bp|location=Sequence derived from alignment at ch6:4036620..4038133+ (Aspergillus niger KJC3)
GATGCGTCGTCAGCAGGGAAAGAGACAAACCTCATCTATCCACAAAGAGG
GCCGGTTGGAACAACTCACAAATGGGGAAGCCATTGAATTCTTAAGCACT
CTCCCACAGAATCACCCCTTTGGCATCCCGGAAAACGACGAAAAGCGGGA
GTTCCTTCGACGGCTTTATTTCCCACTCCGTGACCTATTCAGTACCAGCA
CAACTTCTTCTCGTGCTAATCGCACCAGAGTTCTGGAAATCAGTCGCTTC
GAAGTACTTGAAAGCCTGGCTCAACGTTTTCGAGTTTTTGAAACAGATCC
CTTGGAGTTCTGGGAAAGACTGAGCGAAGCACTGCCACAGTATGATAAAC
ATGGGGCCGAAAAAAGACCAAAAACTTTCCTTGAGGGGGCAGTTCAGCTG
GACACCAACATCCAGGAGCAACTCATACTTCAAAGGTTTGTGTCTGTTGC
CGCCTACAAGCTTTTTCGGAGAGCAATGCCCTCATCAGGAACTCGCATCA
TGCCAGAAAGTCTGAGACGATTCCTGATGCATGTGGGCATATGTTACTCA
GGAAGTTGTGAAGGCGAAGATATCGATAAATACGGAGACATCATCAAACG
TGGCCGAAGATATGCACACTTCTGCCAGAGACTTGTGGCGAGCCAAACAA
TCGATGAGGACAGGGAAGGCGATAATGAAGCCTATGGACCCTTGTTCTTC
TCCTCCCTTCCAGACACTATGTAAGAATCAGCCCAATGGCAGAACCCACT
GGTACTAACAGATTTCAAGTTGGGATGAAAAAGGTCTTGTTGGAGAGGAC
TTTGAGACTGTTATAAAACATCTTCAAGAAATAGATGTGATGAATAAATC
CAGGGAGGTCAACGCCTCTCAAATGGCAAAAGTCTTGCTGGACTTCCACA
AAACATTTGTCTGGGTCAATGAAATGCCCCAAAGATCGTTAGGAAAGAGG
AAGAAAAATGACCAAGGACATGAAACGACCAGGAAAAATCGAGGAAGATC
TGAATATCTAGAACCCTCACTCGCCGCAGCTACTTCTCAAGAACAAGATT
TCCGACCGGTAGGAGGGTCCATGCTCCAGCCTCGCCTCGCTCTGGAGCGC
ACACGCGAGGGGTGTTTCCAGTCAAGTATAGCACTTGATTCAAACCCAGT
GTGGCGGATCTCACAAACCAGAGCTCCGAGTGAATGTTTACTCCGTCTAC
CGGAAATCACGCAGCGAGAACAGCGGAGGGCAGAAATCGCGCCTGGTAGT
TCTACTAGAACGGAAGAACGGTCCCGATTCGACACACTTGTATCGGCAGC
ATGCTCTACAGACACCGCTGAACAGTTCCAAGAAAGGGCGGCCGGAAATA
TGTCAGTGGACTTTGTCCCGCTACCTGCACACTCTCAAGAAACCCTGCTT
GACGTTACCGCACTCGATTTCGTCGTCCCGTTGCTTGACGTGACTGATCT
CGACTTTGTGGACCCACAATCATCCATGTTTAGCCAACTTCATTCATATG
AACAAGATATTTAA back to topCoding sequence (CDS) from alignment at ch6:4036620..4038133+ >KJC3_009030-T1 ID=KJC3_009030-T1|Name=KJC3_009030-T1|organism=Aspergillus niger KJC3|type=CDS|length=2928bp|location=Sequence derived from alignment at ch6:4036620..4038133+ (Aspergillus niger KJC3)
ATGCGTCGTCAGCAGGGAAAGAGACAAACCTCATCTATCCACAAAGAGGG
CCGGTTGGAACAACTCACAAATGGGGAAGCCATTGAATTCTTAAGCACTC
TCCCACAGAATCACCCCTTTGGCATCCCGGAAAACGACGAAAAGCGGGAG
TTCCTTCGACGGCTTTATTTCCCACTCCGTGACCTATTCAGTACCAGCAC
AACTTCTTCTCGTGCTAATCGCACCAGAGTTCTGGAAATCAGTCGCTTCG
AAGTACTTGAAAGCCTGGCTCAACGTTTTCGAGTTTTTGAAACAGATCCC
TTGGAGTTCTGGGAAAGACTGAGCGAAGCACTGCCACAGTATGATAAACA
TGGGGCCGAAAAAAGACCAAAAACTTTCCTTGAGGGGGCAGTTCAGCTGG
ACACCAACATCCAGGAGCAACTCATACTTCAAAGGTTTGTGTCTGTTGCC
GCCTACAAGCTTTTTCGGAGAGCAATGCCCTCATCAGGAACTCGCATCAT
GCCAGAAAGTCTGAGACGATTCCTGATGCATGTGGGCATATGTTACTCAG
GAAGTTGTGAAGGCGAAGATATCGATAAATACGGAGACATCATCAAACGT
GGCCGAAGATATGCACACTTCTGCCAGAGACTTGTGGCGAGCCAAACAAT
CGATGAGGACAGGGAAGGCGATAATGAAGCCTATGGACCCTTGTTCTTCT
CCTCCCTTCCAGACACTATTTGGGATGAAAAAGGTCTTGTTGGAGAGGAC
TTTGAGACTGTTATAAAACATCTTCAAGAAATAGATGTGATGAATAAATC
CAGGGAGGTCAACGCCTCTCAAATGGCAAAAGTCTTGCTGGACTTCCACA
AAACATTTGTCTGGGTCAATGAAATGCCCCAAAGATCGTTAGGAAAGAGG
AAGAAAAATGACCAAGGACATGAAACGACCAGGAAAAATCGAGGAAGATC
TGAATATCTAGAACCCTCACTCGCCGCAGCTACTTCTCAAGAACAAGATT
TCCGACCGGTAGGAGGGTCCATGCTCCAGCCTCGCCTCGCTCTGGAGCGC
ACACGCGAGGGGTGTTTCCAGTCAAGTATAGCACTTGATTCAAACCCAGT
GTGGCGGATCTCACAAACCAGAGCTCCGAGTGAATGTTTACTCCGTCTAC
CGGAAATCACGCAGCGAGAACAGCGGAGGGCAGAAATCGCGCCTGGTAGT
TCTACTAGAACGGAAGAACGGTCCCGATTCGACACACTTGTATCGGCAGC
ATGCTCTACAGACACCGCTGAACAGTTCCAAGAAAGGGCGGCCGGAAATA
TGTCAGTGGACTTTGTCCCGCTACCTGCACACTCTCAAGAAACCCTGCTT
GACGTTACCGCACTCGATTTCGTCGTCCCGTTGCTTGACGTGACTGATCT
CGACTTTGTGGACCCACAATCATCCATGTTTAGCCAACTTCATTCATATG
AACAAGATATTTAAATGCGTCGTCAGCAGGGAAAGAGACAAACCTCATCT
ATCCACAAAGAGGGCCGGTTGGAACAACTCACAAATGGGGAAGCCATTGA
ATTCTTAAGCACTCTCCCACAGAATCACCCCTTTGGCATCCCGGAAAACG
ACGAAAAGCGGGAGTTCCTTCGACGGCTTTATTTCCCACTCCGTGACCTA
TTCAGTACCAGCACAACTTCTTCTCGTGCTAATCGCACCAGAGTTCTGGA
AATCAGTCGCTTCGAAGTACTTGAAAGCCTGGCTCAACGTTTTCGAGTTT
TTGAAACAGATCCCTTGGAGTTCTGGGAAAGACTGAGCGAAGCACTGCCA
CAGTATGATAAACATGGGGCCGAAAAAAGACCAAAAACTTTCCTTGAGGG
GGCAGTTCAGCTGGACACCAACATCCAGGAGCAACTCATACTTCAAAGGT
TTGTGTCTGTTGCCGCCTACAAGCTTTTTCGGAGAGCAATGCCCTCATCA
GGAACTCGCATCATGCCAGAAAGTCTGAGACGATTCCTGATGCATGTGGG
CATATGTTACTCAGGAAGTTGTGAAGGCGAAGATATCGATAAATACGGAG
ACATCATCAAACGTGGCCGAAGATATGCACACTTCTGCCAGAGACTTGTG
GCGAGCCAAACAATCGATGAGGACAGGGAAGGCGATAATGAAGCCTATGG
ACCCTTGTTCTTCTCCTCCCTTCCAGACACTATTTGGGATGAAAAAGGTC
TTGTTGGAGAGGACTTTGAGACTGTTATAAAACATCTTCAAGAAATAGAT
GTGATGAATAAATCCAGGGAGGTCAACGCCTCTCAAATGGCAAAAGTCTT
GCTGGACTTCCACAAAACATTTGTCTGGGTCAATGAAATGCCCCAAAGAT
CGTTAGGAAAGAGGAAGAAAAATGACCAAGGACATGAAACGACCAGGAAA
AATCGAGGAAGATCTGAATATCTAGAACCCTCACTCGCCGCAGCTACTTC
TCAAGAACAAGATTTCCGACCGGTAGGAGGGTCCATGCTCCAGCCTCGCC
TCGCTCTGGAGCGCACACGCGAGGGGTGTTTCCAGTCAAGTATAGCACTT
GATTCAAACCCAGTGTGGCGGATCTCACAAACCAGAGCTCCGAGTGAATG
TTTACTCCGTCTACCGGAAATCACGCAGCGAGAACAGCGGAGGGCAGAAA
TCGCGCCTGGTAGTTCTACTAGAACGGAAGAACGGTCCCGATTCGACACA
CTTGTATCGGCAGCATGCTCTACAGACACCGCTGAACAGTTCCAAGAAAG
GGCGGCCGGAAATATGTCAGTGGACTTTGTCCCGCTACCTGCACACTCTC
AAGAAACCCTGCTTGACGTTACCGCACTCGATTTCGTCGTCCCGTTGCTT
GACGTGACTGATCTCGACTTTGTGGACCCACAATCATCCATGTTTAGCCA
ACTTCATTCATATGAACAAGATATTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009030-T1.utr5p1 | KJC3_009030-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4036620..4038133 + |
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