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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4604214..4605370- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009119-T1 ID=KJC3_009119-T1|Name=KJC3_009119-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1157bp|location=Sequence derived from alignment at ch6:4604214..4605370- (Aspergillus niger KJC3)
CCCGCAACTTCCCCCTCCAACCCCGTGTCTATACCACTCCCTCCACACCC
ACACAATCACAATGGCTCTCCCTGCCTACAAGACCGCCTTCCTGGAGTCT
TGCCTGTCGGCCAACGTGCTGACTTTCGGCACCTTCACCCTGAAGTCGGG
TCGCCGTGCGTCACCCCTCCAACACCGGCATTATCGCAATCGGAAGACTT
ACCACTGTATACAGACTCCCCCTACTTCTTCAACGCCGGCATCTTCAACA
CCGCCTCTCTCCTCTCCGCCCTCTCCACCGCATACGCCCACACCATCATC
ACCTTCCTCGCTGAGAACCCTTCCATCCCCAAGCCCGACGTCATCTTCGG
GTAAAAACCCCCTCTTTCCCCAATACCCCACTTCCACTCAACAACCCATA
AATAACTAACAAAAACCCCCTAAACAGCCCCGCATACAAAGGCATCCCCC
TCGCGTGCGCCACCCTCCTTGAACTCAACCGCATCGACCCCGCCACCTGG
GGCAGCGTGTCCTACAGCTACAACCGCAAAGAAGCCAAGGATCACGGCGA
AGGCGGCAACATTGTCGGCGCCGCTCTGAAGGGCAAGACCGTGCTTGTGA
TCGACGATGTCATCACGGCCGGTACCGCCATGCGTGAGACCCTCAACCTG
GTCGCCAAGGAGGGCGGCAAGGTCGTCGGATTCACTGTTGCTCTGGACCG
CTTGGAGAAGATGCCCGGACCCAAGGACGAGAACGGTGTCGAGGACGATA
AGCCCAGAATGAGTGCTATGGGTCAGATCCGTAAGGAGTATGGTGTGCCC
ACGACGAGTATTGTTACTCTGGATGATTTGATCAAGTTGATGCAGGCGAA
GGGCAATGAGGCCGATATGAAGCGGTTGGAGGAGTATAGGGCTAAGTATC
AGGCTAGTGATTAGTCGGTTTCATTGACCGATTGTTTGGGTGGGTGTGAG
AGGTTAGGTTAGGTTGTGGGCGTAGGAATGAAAAGCTGTATACATAGGGG
CCTGAAGAGGTGCGTAGAGACGGTCGTGAGATGTTTTATGTCAAAATCTT
GAACAAATGACACCTTAAAAAAGACCCCTTGGTTTCAGCTGAATTAGCCC
GGAAAGATGCTCGGCACGCCATGAGTCTAGCCCACTCAGTGGGCACCCGT
TTCCCAC back to topCoding sequence (CDS) from alignment at ch6:4604214..4605370- >KJC3_009119-T1 ID=KJC3_009119-T1|Name=KJC3_009119-T1|organism=Aspergillus niger KJC3|type=CDS|length=2151bp|location=Sequence derived from alignment at ch6:4604214..4605370- (Aspergillus niger KJC3)
CCCCGCATACAAAGGCATCCCCCTCGCGTGCGCCACCCTCCTTGAACTCA
ACCGCATCGACCCCGCCACCTGGGGCAGCGTGTCCTACAGCTACAACCGC
AAAGAAGCCAAGGATCACGGCGAAGGCGGCAACATTGTCGGCGCCGCTCT
GAAGGGCAAGACCGTGCTTGTGATCGACGATGTCATCACGGCCGGTACCG
CCATGCGTGAGACCCTCAACCTGGTCGCCAAGGAGGGCGGCAAGGTCGTC
GGATTCACTGTTGCTCTGGACCGCTTGGAGAAGATGCCCGGACCCAAGGA
CGAGAACGGTGTCGAGGACGATAAGCCCAGAATGAGTGCTATGGGTCAGA
TCCGTAAGGAGTATGGTGTGCCCACGACGAGTATTGTTACTCTGGATGAT
TTGATCAAGTTGATGCAGGCGAAGGGCAATGAGGCCGATATGAAGCGGTT
GGAGGAGTATAGGGCTAAGTATCAGGCTAGTGATTAGACTCCCCCTACTT
CTTCAACGCCGGCATCTTCAACACCGCCTCTCTCCTCTCCGCCCTCTCCA
CCGCATACGCCCACACCATCATCACCTTCCTCGCTGAGAACCCTTCCATC
CCCAAGCCCGACGTCATCTTCGGATGGCTCTCCCTGCCTACAAGACCGCC
TTCCTGGAGTCTTGCCTGTCGGCCAACGTGCTGACTTTCGGCACCTTCAC
CCTGAAGTCGGGTCGCCCCCCGCATACAAAGGCATCCCCCTCGCGTGCGC
CACCCTCCTTGAACTCAACCGCATCGACCCCGCCACCTGGGGCAGCGTGT
CCTACAGCTACAACCGCAAAGAAGCCAAGGATCACGGCGAAGGCGGCAAC
ATTGTCGGCGCCGCTCTGAAGGGCAAGACCGTGCTTGTGATCGACGATGT
CATCACGGCCGGTACCGCCATGCGTGAGACCCTCAACCTGGTCGCCAAGG
AGGGCGGCAAGGTCGTCGGATTCACTGTTGCTCTGGACCGCTTGGAGAAG
ATGCCCGGACCCAAGGACGAGAACGGTGTCGAGGACGATAAGCCCAGAAT
GAGTGCTATGGGTCAGATCCGTAAGGAGTATGGTGTGCCCACGACGAGTA
TTGTTACTCTGGATGATTTGATCAAGTTGATGCAGGCGAAGGGCAATGAG
GCCGATATGAAGCGGTTGGAGGAGTATAGGGCTAAGTATCAGGCTAGTGA
TTAGACTCCCCCTACTTCTTCAACGCCGGCATCTTCAACACCGCCTCTCT
CCTCTCCGCCCTCTCCACCGCATACGCCCACACCATCATCACCTTCCTCG
CTGAGAACCCTTCCATCCCCAAGCCCGACGTCATCTTCGGATGGCTCTCC
CTGCCTACAAGACCGCCTTCCTGGAGTCTTGCCTGTCGGCCAACGTGCTG
ACTTTCGGCACCTTCACCCTGAAGTCGGGTCGCCCCCCGCATACAAAGGC
ATCCCCCTCGCGTGCGCCACCCTCCTTGAACTCAACCGCATCGACCCCGC
CACCTGGGGCAGCGTGTCCTACAGCTACAACCGCAAAGAAGCCAAGGATC
ACGGCGAAGGCGGCAACATTGTCGGCGCCGCTCTGAAGGGCAAGACCGTG
CTTGTGATCGACGATGTCATCACGGCCGGTACCGCCATGCGTGAGACCCT
CAACCTGGTCGCCAAGGAGGGCGGCAAGGTCGTCGGATTCACTGTTGCTC
TGGACCGCTTGGAGAAGATGCCCGGACCCAAGGACGAGAACGGTGTCGAG
GACGATAAGCCCAGAATGAGTGCTATGGGTCAGATCCGTAAGGAGTATGG
TGTGCCCACGACGAGTATTGTTACTCTGGATGATTTGATCAAGTTGATGC
AGGCGAAGGGCAATGAGGCCGATATGAAGCGGTTGGAGGAGTATAGGGCT
AAGTATCAGGCTAGTGATTAGACTCCCCCTACTTCTTCAACGCCGGCATC
TTCAACACCGCCTCTCTCCTCTCCGCCCTCTCCACCGCATACGCCCACAC
CATCATCACCTTCCTCGCTGAGAACCCTTCCATCCCCAAGCCCGACGTCA
TCTTCGGATGGCTCTCCCTGCCTACAAGACCGCCTTCCTGGAGTCTTGCC
TGTCGGCCAACGTGCTGACTTTCGGCACCTTCACCCTGAAGTCGGGTCGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006221 | pyrimidine nucleotide biosynthetic process |
| GO:0009116 | nucleoside metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004588 | orotate phosphoribosyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009119-T1.utr3p1 | KJC3_009119-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009119-T1.utr5p1 | KJC3_009119-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264O9F |
| DBxref | InterPro:IPR023031 |
| DBxref | InterPro:IPR029057 |
| DBxref | InterPro:IPR000836 |
| DBxref | InterPro:IPR004467 |
| DBxref | PFAM:PF00156 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4604214..4605370 - |
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