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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:257331..258024+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009388-T1 ID=KJC3_009388-T1|Name=KJC3_009388-T1|organism=Aspergillus niger KJC3|type=mRNA|length=694bp|location=Sequence derived from alignment at ch7:257331..258024+ (Aspergillus niger KJC3)
GCCAAATAACCTGATTCACTTTCTATATAGCATCAACTACTCTTGCAACT
GATATATTCCTGTCTGTTTTCCTGTCATTCCCAGTCTCTACCATAAATTC
CTTCAAAGATGACTCTCGTCCACATCGGTTAGTTTCCTCATAACCACAAC
AGACACTATGACATCCATCTAACCTACCCCCAACCAGTCCTCTTCAAATT
CCGCCCCGAAGTAACTGATGAGCACAAACAACGCTTCGTGACAGAACTTA
AAAAGCTCAAGAACCTACCCTGTGTCAAATCTGGACGCCTGCTTGTGGGC
GGGCCTAGTGTGACCGACCCCATAGACCGCAGCAAGGGATTCCAAATCGC
TCTAGTAAGCTATCACGAGAACCTGGCTGCACTGGCAGAATACCAGGCAA
GTAAGGAGCATCATGAGTAAGTGATTGGAAATTATGTCCGCTGGTCGAAA
TTGCGGGTGCTAACCTCAGCTATGGCAGTGTGACATCGACATACATGTTT
CCATACAAGGAGGACCTGGTGAGATTTGATTTCGAGGTTGACGAGGAGGA
TGAGTATATGTGTGAATTTCCGGTGTTGGGTTCATAAGTAAAAGAGCTGC
CACTGTTTTTCAATCCACAAGTTGTGCGTTCTCAGTTATATATCTTCACA
GTGCTGGGGCTGTTGCAAATAACCTAAATTATTGAAGGTCGGCT back to topCoding sequence (CDS) from alignment at ch7:257331..258024+ >KJC3_009388-T1 ID=KJC3_009388-T1|Name=KJC3_009388-T1|organism=Aspergillus niger KJC3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch7:257331..258024+ (Aspergillus niger KJC3)
ATGACTCTCGTCCACATCGTCCTCTTCAAATTCCGCCCCGAAGTAACTGA
TGAGCACAAACAACGCTTCGTGACAGAACTTAAAAAGCTCAAGAACCTAC
CCTGTGTCAAATCTGGACGCCTGCTTGTGGGCGGGCCTAGTGTGACCGAC
CCCATAGACCGCAGCAAGGGATTCCAAATCGCTCTAGTAAGCTATCACGA
GAACCTGGCTGCACTGGCAGAATACCAGGCAAGTAAGGAGCATCATGATG
TGACATCGACATACATGTTTCCATACAAGGAGGACCTGGTGAGATTTGAT
TTCGAGGTTGACGAGGAGGATGAGTATATGTGTGAATTTCCGGTGTTGGG
TTCATAAATGACTCTCGTCCACATCGTCCTCTTCAAATTCCGCCCCGAAG
TAACTGATGAGCACAAACAACGCTTCGTGACAGAACTTAAAAAGCTCAAG
AACCTACCCTGTGTCAAATCTGGACGCCTGCTTGTGGGCGGGCCTAGTGT
GACCGACCCCATAGACCGCAGCAAGGGATTCCAAATCGCTCTAGTAAGCT
ATCACGAGAACCTGGCTGCACTGGCAGAATACCAGGCAAGTAAGGAGCAT
CATGATGTGACATCGACATACATGTTTCCATACAAGGAGGACCTGGTGAG
ATTTGATTTCGAGGTTGACGAGGAGGATGAGTATATGTGTGAATTTCCGG
TGTTGGGTTCATAAATGACTCTCGTCCACATCGTCCTCTTCAAATTCCGC
CCCGAAGTAACTGATGAGCACAAACAACGCTTCGTGACAGAACTTAAAAA
GCTCAAGAACCTACCCTGTGTCAAATCTGGACGCCTGCTTGTGGGCGGGC
CTAGTGTGACCGACCCCATAGACCGCAGCAAGGGATTCCAAATCGCTCTA
GTAAGCTATCACGAGAACCTGGCTGCACTGGCAGAATACCAGGCAAGTAA
GGAGCATCATGATGTGACATCGACATACATGTTTCCATACAAGGAGGACC
TGGTGAGATTTGATTTCGAGGTTGACGAGGAGGATGAGTATATGTGTGAA
TTTCCGGTGTTGGGTTCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009388-T1.utr5p1 | KJC3_009388-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009388-T1.utr3p1 | KJC3_009388-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.2 |
| DBxref | InterPro:IPR011008 |
| DBxref | InterPro:IPR013097 |
| DBxref | PFAM:PF07876 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:257331..258024 + |
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