|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:348419..350386+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009423-T1 ID=KJC3_009423-T1|Name=KJC3_009423-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1968bp|location=Sequence derived from alignment at ch7:348419..350386+ (Aspergillus niger KJC3)
ATGATGTCCCCAATCCTTGCTTCAGCTCTACTTCTCTCCGGGGTCCTGGC
GGAGCACTTCCAGGTCCCTTTACAACATACCATCTCACCTTGCTCCACCA
GTCCACATACTACCCACAACGACTTTAACCACAACATCAACTCCATCCCC
CACGGCATCACTGACGACCCTCGCAGTATCGACAACCAGACATTCGACTA
CATAATCGCCGGCGGCGGGCTAACTGGCCTCACCCTCGCCGCCAAACTAG
TCGAGCAGAAGAAATACACCGTCCTAGTGATCGAAAGCGGCTTCTATGCA
TGGGAATACGGCCCCAAGATTGACGACCTCAACACCTACGGCCAAGTATT
CGGCAGCAGCGTCGATCATGCCTACGAGACCAGTCCGCAGCTCGTCGGCA
ACGACGGTGAAACTGGACTAGATAAAGACATCAGAATTGTTCGGTCCGGA
AATGGTCTCGGAGGGTCAACGCTCATCAATGGGGGAACGTGGACGAGGCC
TCACAAGTCGCAGCTTGATTCGTGGGAAGAGGTCTTTGGGAATACAGGGT
GGAATTGGGACGCGCTGAAGGGGAAGATGGATGAGATTGAGGTTCCAAGG
GATCCGACGTCGGATGATATTACGGAGGGGTCGTTCCATAAGTTTGATGC
TAAGTGTCACAATCAACAGCCGGGTAAGGGGAAGGTTAAAGTCGGGGCGA
GGGATCGGAAGTATGGTTGGTCGCCGTTGATCAAGGCGTTGATGCATACG
GTTAACAGTACGTATGAAGAGGTGGTGAATCAGAAGGATCTGTGTTGTGG
GGATCCAACTGGGGTGTCGATGTTTTTGAACACGCTTACCAATGAGCAAA
TCCGGACGGATGCTGCTAGGTCGTGGTTGAAGCCAATCTTGGATGATGAT
GAGTTGAAGCAGTATATTACGGTTTTGACGGGGGAGCTCGTTGGGAAGGT
TCATCTGGCCGACGCCAACCCTTCGGAGACAGGAACAGAATTCAAAGCGA
AAGGTGTGGAGTTTGGGGTGCACAAGAAACAGGAGTGGAAGTGGGATGCT
TGGGCCAGGAAAGAAGTCCTTCTAGCCGCGGGGTCCACGATCTCTCCCCT
CATTCTGCAGTGGTCGGGAATCGGTCCGAAAACCTGGCTTGATGCTGCGG
GAATAGAACATAAGTTGGAGCTCCCTGTGGGATATAACCTCCAGGATCAA
ACAACCACTTCGGTAGTGACGAAGCCGAAACCAGAAGCGAATGGCCAAGG
CCAGGCAGCCTACTTTGCAACCTTTGCAGAGATCTTCGGTAAAGATGCCT
CAGATATGGAAAAGCTCCTGAAAGACGATACAGAGCTCGACAAATGGGCA
GAACACACAGTGAACGGCCACGGATTCCCCGACAAGGCCAACCTCCTAAA
ACAGTACAAGAACTACCGAGACTGGCTCCTAACCGACAAAGTATCCTATG
CCGAACTATTCCTTGACACCGACAACAGCACCCATTTCGACCTCTGGAAT
CTGATCCCATTCACCCGAGGGTATGTCAAGATCCTAGACAACGACCCCTA
TCTGCGAAGCTTCGAATATAACCCGCGATACTTTGAAAATATCCTCGACT
TGAACGGCCAAGCTGCTGCTACGCGGCTGGCACGACAATTGACCAACACG
TATGACATGAAACAGTACGTGGACAAAGAGCAGGTCCCGGGGAGGTATGT
ACCAGAGAACGCGAGTCTAACTGAATGGGCCGATTATGTGAAGCAAAACT
ACCGGGCCAATTATCACGGGGTGGGGACTTGCTCTATGATGAAGAAGGAG
CTTGGTGGTGTTGTCGACCCGGAGGCTAAGGTGTATGGTGTGGAGGGGTT
GAGAGTGGTGGATGGTTCAATCCCGCCTACGCAGGTGTCGTCGCATGTTA
TGACGGTGTTTTATGCGATGGCTGTGAAAATTGCAGAGTCAGTTATTAAG
GATGCTGGTAATGCTTAG back to topCoding sequence (CDS) from alignment at ch7:348419..350386+ >KJC3_009423-T1 ID=KJC3_009423-T1|Name=KJC3_009423-T1|organism=Aspergillus niger KJC3|type=CDS|length=1968bp|location=Sequence derived from alignment at ch7:348419..350386+ (Aspergillus niger KJC3)
ATGATGTCCCCAATCCTTGCTTCAGCTCTACTTCTCTCCGGGGTCCTGGC
GGAGCACTTCCAGGTCCCTTTACAACATACCATCTCACCTTGCTCCACCA
GTCCACATACTACCCACAACGACTTTAACCACAACATCAACTCCATCCCC
CACGGCATCACTGACGACCCTCGCAGTATCGACAACCAGACATTCGACTA
CATAATCGCCGGCGGCGGGCTAACTGGCCTCACCCTCGCCGCCAAACTAG
TCGAGCAGAAGAAATACACCGTCCTAGTGATCGAAAGCGGCTTCTATGCA
TGGGAATACGGCCCCAAGATTGACGACCTCAACACCTACGGCCAAGTATT
CGGCAGCAGCGTCGATCATGCCTACGAGACCAGTCCGCAGCTCGTCGGCA
ACGACGGTGAAACTGGACTAGATAAAGACATCAGAATTGTTCGGTCCGGA
AATGGTCTCGGAGGGTCAACGCTCATCAATGGGGGAACGTGGACGAGGCC
TCACAAGTCGCAGCTTGATTCGTGGGAAGAGGTCTTTGGGAATACAGGGT
GGAATTGGGACGCGCTGAAGGGGAAGATGGATGAGATTGAGGTTCCAAGG
GATCCGACGTCGGATGATATTACGGAGGGGTCGTTCCATAAGTTTGATGC
TAAGTGTCACAATCAACAGCCGGGTAAGGGGAAGGTTAAAGTCGGGGCGA
GGGATCGGAAGTATGGTTGGTCGCCGTTGATCAAGGCGTTGATGCATACG
GTTAACAGTACGTATGAAGAGGTGGTGAATCAGAAGGATCTGTGTTGTGG
GGATCCAACTGGGGTGTCGATGTTTTTGAACACGCTTACCAATGAGCAAA
TCCGGACGGATGCTGCTAGGTCGTGGTTGAAGCCAATCTTGGATGATGAT
GAGTTGAAGCAGTATATTACGGTTTTGACGGGGGAGCTCGTTGGGAAGGT
TCATCTGGCCGACGCCAACCCTTCGGAGACAGGAACAGAATTCAAAGCGA
AAGGTGTGGAGTTTGGGGTGCACAAGAAACAGGAGTGGAAGTGGGATGCT
TGGGCCAGGAAAGAAGTCCTTCTAGCCGCGGGGTCCACGATCTCTCCCCT
CATTCTGCAGTGGTCGGGAATCGGTCCGAAAACCTGGCTTGATGCTGCGG
GAATAGAACATAAGTTGGAGCTCCCTGTGGGATATAACCTCCAGGATCAA
ACAACCACTTCGGTAGTGACGAAGCCGAAACCAGAAGCGAATGGCCAAGG
CCAGGCAGCCTACTTTGCAACCTTTGCAGAGATCTTCGGTAAAGATGCCT
CAGATATGGAAAAGCTCCTGAAAGACGATACAGAGCTCGACAAATGGGCA
GAACACACAGTGAACGGCCACGGATTCCCCGACAAGGCCAACCTCCTAAA
ACAGTACAAGAACTACCGAGACTGGCTCCTAACCGACAAAGTATCCTATG
CCGAACTATTCCTTGACACCGACAACAGCACCCATTTCGACCTCTGGAAT
CTGATCCCATTCACCCGAGGGTATGTCAAGATCCTAGACAACGACCCCTA
TCTGCGAAGCTTCGAATATAACCCGCGATACTTTGAAAATATCCTCGACT
TGAACGGCCAAGCTGCTGCTACGCGGCTGGCACGACAATTGACCAACACG
TATGACATGAAACAGTACGTGGACAAAGAGCAGGTCCCGGGGAGGTATGT
ACCAGAGAACGCGAGTCTAACTGAATGGGCCGATTATGTGAAGCAAAACT
ACCGGGCCAATTATCACGGGGTGGGGACTTGCTCTATGATGAAGAAGGAG
CTTGGTGGTGTTGTCGACCCGGAGGCTAAGGTGTATGGTGTGGAGGGGTT
GAGAGTGGTGGATGGTTCAATCCCGCCTACGCAGGTGTCGTCGCATGTTA
TGACGGTGTTTTATGCGATGGCTGTGAAAATTGCAGAGTCAGTTATTAAG
GATGCTGGTAATGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR027424 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:348419..350386 + |
|
