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KJC3_009432-T1, KJC3_009432-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009432-T1
Unique NameKJC3_009432-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:386468..388777-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009432-T1 ID=KJC3_009432-T1|Name=KJC3_009432-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2310bp|location=Sequence derived from alignment at ch7:386468..388777- (Aspergillus niger KJC3)
GTTTCCACAACACTCCTCATATCAGCCCACTATCGGATAGCGCCATCAGT
AGCTAATATCCGCGCATACTTGCATGGCTTTTATGCCTTGATGGTCGCCG
AGCGGGTCCCCATGGTCGCGACGGACTCCGGTAGTAATTCCCAGTCGCGA
GGTATTCCCGGTTTTCGTCGCACACCAGCAGGTCACGGCTAACTTCTTCT
CGCGTCTCAGGATGCTTTCAATGCTCGAAACGCCGGATTGTCTGCGACAG
AGGGGAACCTACCTGCTTCAAGTGTCAGAAGAAAGGGATCGAATGCTCGG
GATCCGGTCGCTTTCGCTTCAGCCCCGGCCTAGCGAGTCGGGGAAAACTC
AAAGGCTGCACGATTCCGATACCTGATGTCGACCCGAGATCGGTATACAA
AGAAGGCTCAGATGGCCCTCGTCCTATTCGGTGGAAGGATGACCGGAATA
GAATCAACAAAAAACAGAAGCCCAGACTTAGCGAAAAGGAGCGGGTAGTC
CGGAATGGACTGGTCACAGAGAGGGGTTCGGCCAGTGGAGGCAGAGCTCT
CGCACAATCAATATCTGTCGCAAACCAGGACGTTATCCTTAGCTCAGGAC
AAGAATTGTATAGGAACATACCTTCTGAGACCCCCCGGCCATCCTCAATA
ATGGAGACGTCTGTTGGGCAGTGGATCGCACCAGTCGATTACAGAACCCG
CGAATCATTCGACTACTTCGCGAAATACATCGCTCCTGTCATGGTTGTTC
TTGATATATCCAATGGCTACCGGGACATTATCCTGCCCATGGCTTTTGAA
GACAGCCTTCTACAACAGGCCGTTGCTGTTGTGGCCGCGCAACATCTTGG
CTCCCGACACCCCTCATGTCGAGCGGCGACCGAGTCCAGCCGGTCGGCAA
TAATATCTCGCTTACGACGTGATTCTCAGCTTGGTTCGCCCGATCTCGTG
TTTAATTCATCCACTTGGGCGACTCTGATCGTGCTACTTGTTGGGGAAAC
CGTCACCGGAAGCTCCGAGTATAGCCACCTGTTACGGACTCTCCTCACCC
TGGCCCAAAACATGAGAAGCGTCGGAAATACCGAGCTGAGAGATTTTCTC
ACAAAGCAGACGGACATGTTTGCGTTCCTTGGACAGCCACTTTTGAACGA
AGACCTGGGCGCGGAGAGACTTAGAAATCCGGTTGATCCAAGTGTCTGGA
TGGCTTCGAGAGTTAACGCTGATTCGCACCATCACAGAACATTGTCACTT
GTCAGGAAAGTCTTCTCAAAGGGTGCACAAATATATCTTCAGCGTGCGAC
TACAAATCAAAGCTCGTGGCATGTTTTGGAAGAGCTGCGCCAGCTTCTTT
GTCAGATGAGCCCCACGGAGCCAGGTGCCCATGGATTCGTATGGTCATGC
TTCATTGCAGCAGCGGATAGCGTGGATCCCGAGCACAGAGCTTTCTTCAG
CGATTACTTGAAAGGGGTATATTCACGAACAATGTTCGACAATATCCCTA
AAGCTCTTGACGCCTTACCTGCCATTTGGGATCTGCAGGGTTCCGCGAAG
TGGACCGAAAACTTACCCCGCCTGTCACCTATCTTGATCATGTGATCGAA
ATGTCCCATGTGGGATTTATTCACCACTGTCAAAGAGTTGTCGGTTTACC
TCCAATTCAGGCTGATAGACACGGTAACAGCCCCGGGTGGCAGGGTGATG
TCGAAAATTGGCCCGTGCCCTAGTTGGTCCCGACATCTTCTGAAGAGGAC
CCTGTCGGGAACCTCAGCTTGAGATAGACCAAATGACTGATGCGCCAGCC
ATGCAACTTCTCTAAGTACGATGTGTATTGGATATACTCGAGTCATAAAG
CTCATCCGAGCTATTTGCAGCCCAATTCATCGCTGACCAAAGCTTGTCAC
GGACGCAATAACCGGCGAGGCTACTGTCCGTCCCGGTACGGTATCAGGTG
GTAGACCGTCCACATAGGACCTGACTGTCGGGTGGTACCACAGATAGCAA
TAGTTCCGAGATGCTTGCGTTTCCCGGCGCACAGGGCGCACAAAGATGTG
GCCTGCATACGTCAGTAAAGGTGGAATAGTCAACTATCCGATCGGATTAA
GTGAGCCGATTACAAAGGTGGGTCACCATACATTGGCGGCCTCAGGTGTC
CAAGATGCTTGTCTCCACTTTCCATGTAGAAAGCAAGTTCACATTAGTGC
TGCCAATCTTCTCTGGGCGGCCCGATCAATGTCTTTGAATGTAAATTGAA
TCGCAAAGTAGCGGAGTAACTAGGGCTTGCGTGTGGTAGTAAACAGCTGA
CAGGAAAAGC
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Coding sequence (CDS) from alignment at ch7:386468..388777-

>KJC3_009432-T1 ID=KJC3_009432-T1|Name=KJC3_009432-T1|organism=Aspergillus niger KJC3|type=CDS|length=2850bp|location=Sequence derived from alignment at ch7:386468..388777- (Aspergillus niger KJC3)
GATGCTTTCAATGCTCGAAACGCCGGATTGTCTGCGACAGAGGGGAACCT
ACCTGCTTCAAGTGTCAGAAGAAAGGGATCGAATGCTCGGGATCCGGTCG
CTTTCGCTTCAGCCCCGGCCTAGCGAGTCGGGGAAAACTCAAAGGCTGCA
CGATTCCGATACCTGATGTCGACCCGAGATCGGTATACAAAGAAGGCTCA
GATGGCCCTCGTCCTATTCGGTGGAAGGATGACCGGAATAGAATCAACAA
AAAACAGAAGCCCAGACTTAGCGAAAAGGAGCGGGTAGTCCGGAATGGAC
TGGTCACAGAGAGGGGTTCGGCCAGTGGAGGCAGAGCTCTCGCACAATCA
ATATCTGTCGCAAACCAGGACGTTATCCTTAGCTCAGGACAAGAATTGTA
TAGGAACATACCTTCTGAGACCCCCCGGCCATCCTCAATAATGGAGACGT
CTGTTGGGCAGTGGATCGCACCAGTCGATTACAGAACCCGCGAATCATTC
GACTACTTCGCGAAATACATCGCTCCTGTCATGGTTGTTCTTGATATATC
CAATGGCTACCGGGACATTATCCTGCCCATGGCTTTTGAAGACAGCCTTC
TACAACAGGCCGTTGCTGTTGTGGCCGCGCAACATCTTGGCTCCCGACAC
CCCTCATGTCGAGCGGCGACCGAGTCCAGCCGGTCGGCAATAATATCTCG
CTTACGACGTGATTCTCAGCTTGGTTCGCCCGATCTCGTGTTTAATTCAT
CCACTTGGGCGACTCTGATCGTGCTACTTGTTGGGGAAACCGTCACCGGA
AGCTCCGAGTATAGCCACCTGTTACGGACTCTCCTCACCCTGGCCCAAAA
CATGAGAAGCGTCGGAAATACCGAGCTGAGAGATTTTCTCACAAAGCAGA
CGGACATGTTTGCGTTCCTTGGACAGCCACTTTTGAACGAAGACCTGGGC
GCGGAGAGACTTAGAAATCCGGTTGATCCAAGTGTCTGGATGGCTTCGAG
AGTTAACGCTGATTCGCACCATCACAGAACATTGTCACTTGTCAGGAAAG
TCTTCTCAAAGGGTGCACAAATATATCTTCAGCGTGCGACTACAAATCAA
AGCTCGTGGCATGTTTTGGAAGAGCTGCGCCAGCTTCTTTGTCAGATGAG
CCCCACGGAGCCAGGTGCCCATGGATTCGTATGGTCATGCTTCATTGCAG
CAGCGGATAGCGTGGATCCCGAGCACAGAGCTTTCTTCAGCGATTACTTG
AAAGGGGTATATTCACGAACAATGTTCGACAATATCCCTAAAGCTCTTGA
CGCCTTACCTGCCATTTGGGATCTGCAGGGTTCCGCGAAGTGGACCGAAA
ACTTACCCCGCCTGTCACCTATCTTGATCATGTGAATGGTCGCCGAGCGG
GTCCCCATGGTCGCGACGGACTCCGGATGCTTTCAATGCTCGAAACGCCG
GATTGTCTGCGACAGAGGGGAACCTACCTGCTTCAAGTGTCAGAAGAAAG
GGATCGAATGCTCGGGATCCGGTCGCTTTCGCTTCAGCCCCGGCCTAGCG
AGTCGGGGAAAACTCAAAGGCTGCACGATTCCGATACCTGATGTCGACCC
GAGATCGGTATACAAAGAAGGCTCAGATGGCCCTCGTCCTATTCGGTGGA
AGGATGACCGGAATAGAATCAACAAAAAACAGAAGCCCAGACTTAGCGAA
AAGGAGCGGGTAGTCCGGAATGGACTGGTCACAGAGAGGGGTTCGGCCAG
TGGAGGCAGAGCTCTCGCACAATCAATATCTGTCGCAAACCAGGACGTTA
TCCTTAGCTCAGGACAAGAATTGTATAGGAACATACCTTCTGAGACCCCC
CGGCCATCCTCAATAATGGAGACGTCTGTTGGGCAGTGGATCGCACCAGT
CGATTACAGAACCCGCGAATCATTCGACTACTTCGCGAAATACATCGCTC
CTGTCATGGTTGTTCTTGATATATCCAATGGCTACCGGGACATTATCCTG
CCCATGGCTTTTGAAGACAGCCTTCTACAACAGGCCGTTGCTGTTGTGGC
CGCGCAACATCTTGGCTCCCGACACCCCTCATGTCGAGCGGCGACCGAGT
CCAGCCGGTCGGCAATAATATCTCGCTTACGACGTGATTCTCAGCTTGGT
TCGCCCGATCTCGTGTTTAATTCATCCACTTGGGCGACTCTGATCGTGCT
ACTTGTTGGGGAAACCGTCACCGGAAGCTCCGAGTATAGCCACCTGTTAC
GGACTCTCCTCACCCTGGCCCAAAACATGAGAAGCGTCGGAAATACCGAG
CTGAGAGATTTTCTCACAAAGCAGACGGACATGTTTGCGTTCCTTGGACA
GCCACTTTTGAACGAAGACCTGGGCGCGGAGAGACTTAGAAATCCGGTTG
ATCCAAGTGTCTGGATGGCTTCGAGAGTTAACGCTGATTCGCACCATCAC
AGAACATTGTCACTTGTCAGGAAAGTCTTCTCAAAGGGTGCACAAATATA
TCTTCAGCGTGCGACTACAAATCAAAGCTCGTGGCATGTTTTGGAAGAGC
TGCGCCAGCTTCTTTGTCAGATGAGCCCCACGGAGCCAGGTGCCCATGGA
TTCGTATGGTCATGCTTCATTGCAGCAGCGGATAGCGTGGATCCCGAGCA
CAGAGCTTTCTTCAGCGATTACTTGAAAGGGGTATATTCACGAACAATGT
TCGACAATATCCCTAAAGCTCTTGACGCCTTACCTGCCATTTGGGATCTG
CAGGGTTCCGCGAAGTGGACCGAAAACTTACCCCGCCTGTCACCTATCTT
GATCATGTGAATGGTCGCCGAGCGGGTCCCCATGGTCGCGACGGACTCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009432KJC3_009432Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009432-T1KJC3_009432-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009432-T1.cdsKJC3_009432-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009432-T1.utr3p1KJC3_009432-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009432-T1.exon2KJC3_009432-T1.exon2Aspergillus niger KJC3exon
KJC3_009432-T1.exon1KJC3_009432-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009432-T1.utr5p1KJC3_009432-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:386468..388777 -
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