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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2345747..2346538- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010102-T1 ID=KJC3_010102-T1|Name=KJC3_010102-T1|organism=Aspergillus niger KJC3|type=mRNA|length=792bp|location=Sequence derived from alignment at ch7:2345747..2346538- (Aspergillus niger KJC3)
ATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGCCTC
TATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACCGCCG
GTGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCCAGC
GGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAGCGAGATCGCCTG
GCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCTACG
CCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCCAGC
ATCCCCTCCACCTGGAAGTGGACGTATGTTGCAGCCTAGACCTTCCGACC
GACCGACCGTCAGGACGCATGCTGACTCTTTGGGAATAGATACTCTGGCT
CCGACATCGTGGCCGACGTGGCCTATGACATGTTCCTGGGCTCGACCGCC
GACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTTGCTGCCCTGGG
CGGTGCTGGCCCCATCTCGTCGACTGGCTCCACCATTGCCACCCCGACGA
TCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACGGCGACACCACC
GTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTCTCCGGCGACCT
GAACGACTTCTTCACCTACTTGGTGGACAACGAGGGTGTCTCTGACAGCC
TGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCACCGGTAGCGAC
GCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAGTAA back to topCoding sequence (CDS) from alignment at ch7:2345747..2346538- >KJC3_010102-T1 ID=KJC3_010102-T1|Name=KJC3_010102-T1|organism=Aspergillus niger KJC3|type=CDS|length=1452bp|location=Sequence derived from alignment at ch7:2345747..2346538- (Aspergillus niger KJC3)
ATACTCTGGCTCCGACATCGTGGCCGACGTGGCCTATGACATGTTCCTGG
GCTCGACCGCCGACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTT
GCTGCCCTGGGCGGTGCTGGCCCCATCTCGTCGACTGGCTCCACCATTGC
CACCCCGACGATCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACG
GCGACACCACCGTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTC
TCCGGCGACCTGAACGACTTCTTCACCTACTTGGTGGACAACGAGGGTGT
CTCTGACAGCCTGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCA
CCGGTAGCGACGCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAG
TAAATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGC
CTCTATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACCG
CCGGTGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCC
AGCGGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAGCGAGATCGC
CTGGCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCT
ACGCCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCC
AGCATCCCCTCCACCTGGAAGTGGACATACTCTGGCTCCGACATCGTGGC
CGACGTGGCCTATGACATGTTCCTGGGCTCGACCGCCGACGCCTCCTCCG
ATGAGTACGAGATCATGGTCTGGCTTGCTGCCCTGGGCGGTGCTGGCCCC
ATCTCGTCGACTGGCTCCACCATTGCCACCCCGACGATCAACGGCGTGAC
CTGGGACCTGTACACCGGCCCCAACGGCGACACCACCGTCTACAGCTTCG
TCGCCCAGTCGACCACCGAGGACTTCTCCGGCGACCTGAACGACTTCTTC
ACCTACTTGGTGGACAACGAGGGTGTCTCTGACAGCCTGTACCTGACCAC
CCTTGAGGCGGGTACCGAGCCCTTCACCGGTAGCGACGCTGAGCTGAAGG
TGTCCGAGTACTCCGTTTCCATCGAGTAAATGAAGGTTCTCGCTCTTTCC
GCTCTTCTTTCCTTGGCTTCGGCCGCCTCTATCAGCCGCCGTAGCGACTT
CTGCGGCCAATGGGATACCGCCACCGCCGGTGACTTCATCCTGTACAACG
ACCTCTGGGGTGAAGACAACGCCTCCAGCGGCTCCCAGTGCACCGGCGTC
GACTCGGCCAGCGGCAGCGAGATCGCCTGGCACACCAGCTGGTCCTGGGA
GGGTGGCAGCAGTGACGTCAAGAGCTACGCCAACGCTGCTCTGCAGTTCA
CTGGTACTCAGCTGAGCTCCATCTCCAGCATCCCCTCCACCTGGAAGTGG
AC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000272 | polysaccharide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0008810 | cellulase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-15) |
| Note | CAZy:GH12 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR013319 |
| DBxref | InterPro:IPR002594 |
| DBxref | PFAM:PF01670 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2345747..2346538 - |
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