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KJC3_010103-T1, KJC3_010103-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010103-T1
Unique NameKJC3_010103-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2347644..2348443+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010103-T1 ID=KJC3_010103-T1|Name=KJC3_010103-T1|organism=Aspergillus niger KJC3|type=mRNA|length=800bp|location=Sequence derived from alignment at ch7:2347644..2348443+ (Aspergillus niger KJC3)
ATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCT
CTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCT
CCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGAC
ACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCAC
CGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTG
GTGCGATGGGGGCAATGTATATTATCCATGCTAGTGCGTCCCCTCTTTTG
CTCCATACCACCTCTATAATTATCTATAGTGCCTGAACTAAGCTTTGATT
CTCCTATAGGTATCACGGAGTACTTGATCATTTTCGGTATGGCTTCCCCT
GTATCCCGGATATTTTTATGCCCTCGATTGCACGAGCTAACTACTCTCTC
CCTGTCCATTAGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCAC
ACGGCCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGT
CCCTGGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACC
TCCGCCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCT
CTGGAGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGC
CGATACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCA
GAATCACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGA
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Coding sequence (CDS) from alignment at ch7:2347644..2348443+

>KJC3_010103-T1 ID=KJC3_010103-T1|Name=KJC3_010103-T1|organism=Aspergillus niger KJC3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch7:2347644..2348443+ (Aspergillus niger KJC3)
ATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCT
CTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCT
CCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGAC
ACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCAC
CGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTG
GTGCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTG
ATCATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACAC
GGCCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCC
CTGGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTC
CGCCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCT
GGAGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCG
ATACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGA
ATCACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAAT
GCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCTCT
ACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCC
CACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACAC
TCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCG
ACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGT
GCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGAT
CATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGG
CCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCT
GGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCG
CCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGG
AGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGAT
ACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAAT
CACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAATGC
GCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCTCTAC
AGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCCCA
CCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACACTC
GCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCGAC
ACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGTGC
GATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGATCA
TTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCC
GACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCTGG
ATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCC
GCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAG
TACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATAC
CTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCA
CTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERG1KJC3_010103Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010103-T1.exon1KJC3_010103-T1.exon1Aspergillus niger KJC3exon
KJC3_010103-T1.exon2KJC3_010103-T1.exon2Aspergillus niger KJC3exon
KJC3_010103-T1.exon3KJC3_010103-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010103-T1.cdsKJC3_010103-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010103-T1KJC3_010103-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006716
DBxrefPFAM:PF04622
ProductSqualene epoxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2347644..2348443 +
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