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KJC3_010148-T1, KJC3_010148-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010148-T1
Unique NameKJC3_010148-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2472530..2474755-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010148-T1 ID=KJC3_010148-T1|Name=KJC3_010148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2226bp|location=Sequence derived from alignment at ch7:2472530..2474755- (Aspergillus niger KJC3)
ATTCGCTGCACTTTCAGGTCCCTCAATAAATTCACCCCAACCTGAAAGAC
ACGCCGTTATCCTTCCTACGCACTCAATTCCTTCTGTCAGTTCTTTACGA
TTTCCAATCTTCACGATACTCCTTTCACCCGCTAACCACCATCTACTTAT
CTCAGCCTCTCCTCTTTCTTCCACTTCTCCTTCTAATTAGCTTCTCACCG
TACTCACATACCATCACATCAAAAGTGAGCGTCACAGCTTCAACTGGTTC
AGAATTCTAAGCTAACAGCTTACTCAGTGCTTGAAGCTCGCCTAGAACAA
GCCAGTCTTCTGAAGCGCGTGAGTAACTCTACATCATATTGTTGCATGTC
AATGCTTGATTGCTGACATTTGGTTTCTTTCTTCAGGTCGTCGACGCCAT
CAAGGACCTGGTCCAAGACTGCAACTTCGACTGCAATGACTCCGGTATCT
CACTTCAGGCCATGGACAACTCCCATGTTGCTCTCGTCTCCATGATGCTC
AAGGCCGAGGGATTCTCCCCTTACCGTTGCGACCGTAACATTGCCCTCGG
TATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCGCCGCCCAGAATGAAG
ATATCCTCACTCTCAAGGCTGAGGACTCTCCCGATGCCGTCAACCTGATG
TTCGAGAGTGCCGAGACGGATAGACTTAGCGAATATGATATTAAGTTGAT
GGATATTGACCAGGAGCACCTGGCCATCCCGGAGACAGAGTACGCTGCTA
CGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATCTGCAGGGATCTGAAT
GCCCTCTCTGAGTCCGGTATGTTCTTCTTATTGGCAACGGGTGTGATCCG
CGACTAATTCAACTCCTAGTTGTCATTGAGGCTACGAAGGAGGGTGTCAA
GTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTCCGTCAGC
ACACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCTCACCGAA
CCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCTGCAAGGC
TACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAGGTGCCGC
TCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTACCTGGCT
CCTAAGGTACGATGACTCCTCATCTGGCTTGTTTGAGAGTTGTACTGACT
TATGATATTTAGATTGGCGATGAGGAGTAAGTGAACAATATGCGAAATCA
TAATGACGAGTGGGGAGCAATATGGAGGCAACGATTTCTCTTTTTCATTT
CAACTTCTGATGTTCGGAAAATATCCTGAATGTTCTCGGGGGCCTGTGTT
CATTTTTGTTTCTATAATATCCAGCTAGATGCTAAGCGACCAACGTGTTC
AAAGTCCAATTGGTTACGATAACTTTTGCAGTCTCTCTACATGTTATATA
TGATGTACGAAGCAGTGGATTTTGTGCAATGAAGCTGCATTGGTCAAACT
GCATATAAGTATTCTGCAATAGCAGCTTGATTACATGTCCATAACACAGC
TTTTCCTCCTTGACCATACAATATATCCCCTACCACCAAACCCATCAAGT
ACTCCGTACCTAAAGAAAGGGACCCATACAGGTCCCCAAACCCAACAATT
AGCCGGGGGAAAACAAAGTCCTTTCCAGTTCCCAAACCGCAAACACACAC
AGATCCTCAAATATAGAACAGGGATCCAACTAACCTCAGAAAAAAAGAAG
TGAAGCGCCACCCCCACCAGAATAATCGGAATCGAATGATACCAATCCTA
TCCCCCTAACCCACCCTATAAGGGGTGAGCGAGAGACAGGAAACGGCATG
CTGCGTATTGCACTAAAGTGTCGCACACCCGATCAAAGCCGAGTGCACAC
ACAATCTTCGCAACGACTCTCCCATGGGGAAAAAGAAGAAAAGGAATGTA
AGAGGTTCTTACATCCTTCCTCCCCCCCGATGTTTCTGATGCCAATTGCA
GGTGTGTGCAAGGATGTCACACCAGGCCCTTGAGGGCAGTACCGGCCATT
GCAAATGATATTACTCATTTCCAAGTGGCGGGTGCACAGGGTGAAGATTC
CTCCGAATTTCTCATTTGCAGTGGGTTTCGGGTGGTTTCCCGGAGGAAAC
CAGAGCCGAGGACAGGAAGGTATTCCTGTCGTGTGTAGCAAAGAAACGCA
GCATTGGTGGGGATGGCGCTTAAGAG
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Coding sequence (CDS) from alignment at ch7:2472530..2474755-

>KJC3_010148-T1 ID=KJC3_010148-T1|Name=KJC3_010148-T1|organism=Aspergillus niger KJC3|type=CDS|length=3885bp|location=Sequence derived from alignment at ch7:2472530..2474755- (Aspergillus niger KJC3)
ATTGGCGATGAGGAGTAATTGTCATTGAGGCTACGAAGGAGGGTGTCAAG
TTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTCCGTCAGCA
CACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCTCACCGAAC
CCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCTGCAAGGCT
ACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAGGTGCCGCT
CCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTACCTGGCTC
CTAAGGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGAC
TGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGC
TCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCG
ACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTG
CGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCC
CGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCG
AATATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCG
GAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCG
TATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTGCTTGAAGCTCGCC
TAGAACAAGCCAGTCTTCTGAAGCGCAATTGGCGATGAGGAGTAATTGTC
ATTGAGGCTACGAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGG
CAGTGGCTCCGTCACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCAC
AGAACGTCTCCATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTC
AAGTACCTCGTCAACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCAC
CCTGTGCCTGTCGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTA
GCGGTCATCTGAGATTCTACCTGGCTCCTAAGGTCGTCGACGCCATCAAG
GACCTGGTCCAAGACTGCAACTTCGACTGCAATGACTCCGGTATCTCACT
TCAGGCCATGGACAACTCCCATGTTGCTCTCGTCTCCATGATGCTCAAGG
CCGAGGGATTCTCCCCTTACCGTTGCGACCGTAACATTGCCCTCGGTATC
AACCTGCTCTCCCTGACCAAGGTCCTGCGCGCCGCCCAGAATGAAGATAT
CCTCACTCTCAAGGCTGAGGACTCTCCCGATGCCGTCAACCTGATGTTCG
AGAGTGCCGAGACGGATAGACTTAGCGAATATGATATTAAGTTGATGGAT
ATTGACCAGGAGCACCTGGCCATCCCGGAGACAGAGTACGCTGCTACGGT
AGAGATGCCGGCAGCAGAGTTCCAGCGTATCTGCAGGGATCTGAATGCCC
TCTCTGAGTCCGTGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCTGAAG
CGCAATTGGCGATGAGGAGTAATTGTCATTGAGGCTACGAAGGAGGGTGT
CAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTCCGTC
AGCACACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCTCACC
GAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCTGCAA
GGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAGGTGC
CGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTACCTG
GCTCCTAAGGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTT
CGACTGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATG
TTGCTCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGT
TGCGACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGT
CCTGCGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACT
CTCCCGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTT
AGCGAATATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCAT
CCCGGAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCC
AGCGTATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTGCTTGAAGCT
CGCCTAGAACAAGCCAGTCTTCTGAAGCGCAATTGGCGATGAGGAGTAAT
TGTCATTGAGGCTACGAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACA
TTGGCAGTGGCTCCGTCACCGTCCGTCAGCACACCAACGTCGAGAACCCC
GCACAGAACGTCTCCATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTC
CCTCAAGTACCTCGTCAACTTCTGCAAGGCTACCAACCTGTCGAACAAGG
TCACCCTGTGCCTGTCGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTC
GGTAGCGGTCATCTGAGATTCTACCTGGCTCCTAAGGTCGTCGACGCCAT
CAAGGACCTGGTCCAAGACTGCAACTTCGACTGCAATGACTCCGGTATCT
CACTTCAGGCCATGGACAACTCCCATGTTGCTCTCGTCTCCATGATGCTC
AAGGCCGAGGGATTCTCCCCTTACCGTTGCGACCGTAACATTGCCCTCGG
TATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCGCCGCCCAGAATGAAG
ATATCCTCACTCTCAAGGCTGAGGACTCTCCCGATGCCGTCAACCTGATG
TTCGAGAGTGCCGAGACGGATAGACTTAGCGAATATGATATTAAGTTGAT
GGATATTGACCAGGAGCACCTGGCCATCCCGGAGACAGAGTACGCTGCTA
CGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATCTGCAGGGATCTGAAT
GCCCTCTCTGAGTCCGTGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCT
GAAGCGCAATTGGCGATGAGGAGTAATTGTCATTGAGGCTACGAAGGAGG
GTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTC
CGTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCT
CACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCT
GCAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAG
GTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTA
CCTGGCTCCTAAGGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCA
ACTTCGACTGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCC
CATGTTGCTCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTA
CCGTTGCGACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCA
AGGTCCTGCGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAG
GACTCTCCCGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAG
ACTTAGCGAATATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGG
CCATCCCGGAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAG
TTCCAGCGTATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTGCTTGA
AGCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006275regulation of DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0030337DNA polymerase processivity factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCN1KJC3_010148Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010148-T1KJC3_010148-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010148-T1.cdsKJC3_010148-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010148-T1.utr3p1KJC3_010148-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010148-T1.exon6KJC3_010148-T1.exon6Aspergillus niger KJC3exon
KJC3_010148-T1.exon5KJC3_010148-T1.exon5Aspergillus niger KJC3exon
KJC3_010148-T1.exon4KJC3_010148-T1.exon4Aspergillus niger KJC3exon
KJC3_010148-T1.exon3KJC3_010148-T1.exon3Aspergillus niger KJC3exon
KJC3_010148-T1.exon2KJC3_010148-T1.exon2Aspergillus niger KJC3exon
KJC3_010148-T1.exon1KJC3_010148-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010148-T1.utr5p2KJC3_010148-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010148-T1.utr5p1KJC3_010148-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR022659
DBxrefInterPro:IPR022649
DBxrefInterPro:IPR022648
DBxrefInterPro:IPR000730
DBxrefPFAM:PF04139
DBxrefPFAM:PF02144
DBxrefPFAM:PF00705
DBxrefPFAM:PF02747
ProductDNA polymerase delta processivity factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2472530..2474755 -
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