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KJC3_010154-T1, KJC3_010154-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010154-T1
Unique NameKJC3_010154-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2497184..2499245+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010154-T1 ID=KJC3_010154-T1|Name=KJC3_010154-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2062bp|location=Sequence derived from alignment at ch7:2497184..2499245+ (Aspergillus niger KJC3)
CCGCAACCTGGCTCCTTCTCCTGCTCTTATCTCCAGCCCAGCCGTTCACC
ACCGCCATTTGGCCCATTTTGCACCCTGCCTCGTGCTGCTACCCGATCCG
CAAATCCATAGTCTGAGGTTCTGAGTCGATTTTCACCATGTGGCTCATTA
ACTGGTGTAGGTAGTCTCCTGTTTTGCCATCCGCCGACTTGGCCCCGATC
AGGTGGTCTGCAGACCTGCCCTGCACGCTCTTGGATCCATTGGATCCTCA
TCGTTTCTCTTCTGTTCACAGTGTCTCTCGTATGCCAATTTACTGATTTA
TCTTTTCCGAATAGTCTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACA
AGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACGACC
CTCCTGCACATGCTGAAGGTATGTGAGCTTCCTTTAGTCGCAGACAAGCT
CTGCTTTGATGGCAACAATGGTGGATATGGTATCGCCTGGGATCGACTCC
GATCGCAAGGGAATGCCACCACGGCAGGGATAGAGCCGCGAGAGATGTGG
ACGATAAGCTAACATCTGTGTTTGATAATAGAACGACCGGGTTGCCATCC
TCCAGCCCACTGCTCACCCGAGTACGTATCACCCGCACGAACATGCCAGC
GAGGGACTATTCGACAGCGACCGAGGAGAATCGATTTTCATGAACATGGG
CTAACCGCACTCCTTGAATACAGCATCCGAAGAACTCGCCATCGGCAACA
ACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGGTGAGTAACAC
ACCTCGTAGCCCCGTGGTATAGATCGAAACAAGAAAACTAAATGTAGCAA
TTCTTGTTAAATAGCTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTA
GCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAG
TCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGT
TCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCG
AGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGC
AAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGT
TGTCATGAGACAGGGTGAGTGGGATTTTTCATATCCAAACCAATGTCGAC
CAGGAGCTAATCGTTCTGTGCCTTGTAGGATACGGTGAAGGTATCAGATG
GCTGTCTCAATACGTCTAAGTCAGCTAGCTCGCTTGCTAGCCAGCTGTTG
ACTTTATTGTTGCGATATATCCCGACTACTCTATTTTTGTTCTCCTATCC
CTCTACTCCCGACGATCTCCCTCTTAAACGCAATCCTCTCATCTTCCTCC
GAACCCTCCTTGGAGGGTGTAGGAATTCCATATATCCCAATCCAATCCAA
TCCAATGCAGTTCAATGAGATGAACTCCACTCCGTCCAATCAGACAGGCC
ATCACAACTGCCTGGAAGAAAGTACTCGCTAGGCATAATAGTCCCATGAC
CCATCTACAATATATCTCGATTGTTCAACCATTTAAATGGTCATGTCACC
TACACTGATTCATACTATGATGTTGTGTGCTTTTTTTTTCGGAGTTTGAT
CTTTTGACGATGTTTCGATCAGTTCTTGGTGCTTTATCACGCTGTCCCTT
TCATCTCGTTGTAGCCACCTTTCCTCTTGTTCTCTCTGCGTTCGCCTTCC
AAGACCAAACAATCAACCAACAAAGCAAATAAAAAAAACAAAGACATATC
CTTCCCCCTGACTTTCTCCCTTTTTCTTCACCTATACTGTAACAATCTAG
TTCAGTCACCCCCTTTCACCGCTTGCTTGCTTCTGTTCTCTAGATACGAC
CGAGTACGCAGAAACGAGAATTCCAAATATACAAAACCCCTAGAATACAT
TCATCCATCCATCTCACCACAGGCAGTAGTAGTGTATGAAGAGTTACTAC
TATTCGGACATGTTTCCTACTACTTCAGTCATGAGTCCCAATCCACTACT
ACTATTTCTGGC
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Coding sequence (CDS) from alignment at ch7:2497184..2499245+

>KJC3_010154-T1 ID=KJC3_010154-T1|Name=KJC3_010154-T1|organism=Aspergillus niger KJC3|type=CDS|length=2280bp|location=Sequence derived from alignment at ch7:2497184..2499245+ (Aspergillus niger KJC3)
ATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGAC
ATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCTGG
GTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTT
AGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGA
GTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGG
TTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGTTAGC
GAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTAAGGG
CAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTG
TTGTCATGAGACAGGGATACGGTGAAGGTATCAGATGGCTGTCTCAATAC
GTCTAAATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCA
CCCGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCG
ACCTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACTACTTCCCC
GAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTT
CCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGG
CTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCT
GTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGG
TAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGT
GCAGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGATGGCTGTCT
CAATACGTCTAAATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCCAC
TGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGA
CCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACTAC
TTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGA
GCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGG
AGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCG
GATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGAC
CACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGT
TCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGATGG
CTGTCTCAATACGTCTAAATGCTGAAGAACGACCGGGTTGCCATCCTCCA
GCCCACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACAACCGCT
TCACGACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAG
GACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGA
CCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCA
TGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGAC
CACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTA
CCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTG
AGGTGTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAAGGTATC
AGATGGCTGTCTCAATACGTCTAAATGCTGAAGAACGACCGGGTTGCCAT
CCTCCAGCCCACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACA
ACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTG
TGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGC
CAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCC
TTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAG
ATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGG
ATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGC
CCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAA
GGTATCAGATGGCTGTCTCAATACGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SAR1KJC3_010154Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010154-T1KJC3_010154-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010154-T1.utr5p1KJC3_010154-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010154-T1.utr5p2KJC3_010154-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010154-T1.exon1KJC3_010154-T1.exon1Aspergillus niger KJC3exon
KJC3_010154-T1.exon2KJC3_010154-T1.exon2Aspergillus niger KJC3exon
KJC3_010154-T1.exon3KJC3_010154-T1.exon3Aspergillus niger KJC3exon
KJC3_010154-T1.exon4KJC3_010154-T1.exon4Aspergillus niger KJC3exon
KJC3_010154-T1.exon5KJC3_010154-T1.exon5Aspergillus niger KJC3exon
KJC3_010154-T1.exon6KJC3_010154-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010154-T1.cdsKJC3_010154-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010154-T1.utr3p1KJC3_010154-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006687
DBxrefInterPro:IPR006689
DBxrefPFAM:PF00025
ProductCOPII coat GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2497184..2499245 +
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