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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2663119..2664207+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010203-T1 ID=KJC3_010203-T1|Name=KJC3_010203-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1089bp|location=Sequence derived from alignment at ch7:2663119..2664207+ (Aspergillus niger KJC3)
CTCGGCAACAGCTCATCTACGTACGGCCCGAATAAACATCGAACCCAGAA
ACTCTCCCCAAACTAATTTCCGAAATCTTATACACCCACTCGCACCCTCC
CCTCCAAAGCGGCGCCATCACCGCGCAAACCCCAAAGGAAAGATACGGAG
CGGAAAGTCCTAGCATGAGCCGTCATGCGATGGCCGCCATGGGCTTCCAA
CACGCAAGCCTCCAACAATGACCACCCTACCACCACGAACAACAATGACC
CCAAGAACCTACTCGACTGGAGCGCCTTCACCGAACTCCGCACCCTCATC
CCAACTCTAGTCCTCACAACCGGCATCCTCAGCGCCTTCACCCTGCACCG
GAACTACCTCCGCCGGTTCCCCACAGCAGTCAACATCACGCCCGCATATT
ACCGTCGCCGCAGCATCCTGGGAAAAGTAACCAGCGTCGGTGACGGCGAC
AACTTTCGCATCTATCATACACCCGGCGGAAGACTCGCGGGTTGGGGCTG
GGTACCCTGGAAGAAGGTTCCCACGACGCGGAAGGAATTGAGAGATCAGA
CTGTATGTATACCTCCCCACTTTTTTTTTTTTCATCTACGTTTATGCTAC
CGGAGACTATATTTCTAACATCAGAATGAAATTAAATAGATCCATGTCCG
GATAGCTGGTGTCGACGCCCCCGAACAAGCGCACTTCGGACGCCCCGCGC
AACCCTTCGGCAAAGAAGCACACGAGTGGCTAACGGGGTACTTGATAAAC
CGGCGCGTGCGGATATATGTGCATCGACAGGACCAGTATCAGCGTGTGGT
GGCGACGGTGTTTGTGCGGCGGGCGCTGGATTTCCCGGTTCCGTTTCGCA
GGCGCGATGTCGGGTATGAGATGTTGAGGAAGGGGTTGGCAACAGTGTAT
GAGGCGAAGGTTGGGGCGGAGTTTGGGGGTGAGGTGATGGAGAAGAAGTA
TCGGAGTGCGGAGTGGTGGGCGAAGGCGAGGGGGTTGGGGCTGTGGAAGG
GGTTCAAGAAGAATAGGGATGCGTGGGAGAGTCCGAGGGAGTTTAAGACT
AGGACGGGGATGGAAGATGTGGGGGATGGGAAGAAGTAG back to topCoding sequence (CDS) from alignment at ch7:2663119..2664207+ >KJC3_010203-T1 ID=KJC3_010203-T1|Name=KJC3_010203-T1|organism=Aspergillus niger KJC3|type=CDS|length=1656bp|location=Sequence derived from alignment at ch7:2663119..2664207+ (Aspergillus niger KJC3)
ATGCGATGGCCGCCATGGGCTTCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAACAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTATCCATGTCCGGATAGCTGGTG
TCGACGCCCCCGAACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGC
AAAGAAGCACACGAGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCG
GATATATGTGCATCGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGT
TTGTGCGGCGGGCGCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTC
GGGTATGAGATGTTGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGT
TGGGGCGGAGTTTGGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGG
AGTGGTGGGCGAAGGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAG
AATAGGGATGCGTGGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGAT
GGAAGATGTGGGGGATGGGAAGAAGTAGATGCGATGGCCGCCATGGGCTT
CCAACACGCAAGCCTCCAACAATGACCACCCTACCACCACGAACAACAAT
GACCCCAAGAACCTACTCGACTGGAGCGCCTTCACCGAACTCCGCACCCT
CATCCCAACTCTAGTCCTCACAACCGGCATCCTCAGCGCCTTCACCCTGC
ACCGGAACTACCTCCGCCGGTTCCCCACAGCAGTCAACATCACGCCCGCA
TATTACCGTCGCCGCAGCATCCTGGGAAAAGTAACCAGCGTCGGTGACGG
CGACAACTTTCGCATCTATCATACACCCGGCGGAAGACTCGCGGGTTGGG
GCTGGGTACCCTGGAAGAAGGTTCCCACGACGCGGAAGGAATTGAGAGAT
CAGACTATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGAACAAGCGCA
CTTCGGACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACGAGTGGCTAA
CGGGGTACTTGATAAACCGGCGCGTGCGGATATATGTGCATCGACAGGAC
CAGTATCAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGCGCTGGATTT
CCCGGTTCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGTTGAGGAAGG
GGTTGGCAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTTGGGGGTGAG
GTGATGGAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAAGGCGAGGGG
GTTGGGGCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGTGGGAGAGTC
CGAGGGAGTTTAAGACTAGGACGGGGATGGAAGATGTGGGGGATGGGAAG
AAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010203-T1.utr5p1 | KJC3_010203-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092644K0 |
| DBxref | InterPro:IPR035437 |
| DBxref | InterPro:IPR016071 |
| DBxref | PFAM:PF00565 |
| Product | putative endonuclease lcl3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2663119..2664207 + |
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