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KJC3_010314-T1, KJC3_010314-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010314-T1
Unique NameKJC3_010314-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3006492..3008632-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010314-T1 ID=KJC3_010314-T1|Name=KJC3_010314-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2141bp|location=Sequence derived from alignment at ch7:3006492..3008632- (Aspergillus niger KJC3)
CCTGGCTTTTGCTTTTTGAGAGACTCTGCAAGGAGACAATTCCAGTGATT
CTTCTCTCATACATCTTTCCTATATATTCGTTGTGATTCCACCCGGTTGC
AATCTCGAAATCTCAAGATATCAATCTACCATTAAGCTCTCATCGATCCA
ATCCACTGAACCGATCTTCCCTTTGACTTACTCATCCATACCTCCCGTCG
GGCATACTATCTACCTATCTAAGCTGCGACTTTATCGCCTCTCCTTCTCT
TTCTGCCCCTCCGTCAGTCCACTTGTTACCCCGCCGCACCACCATGTCGG
TATGTTTTTGCTTCTTCCAGCATCTCAACCCTCTCAATGGCAATGTTAAT
ACTCATGATGCCTCCAGTTCTTCATTGAAAACCCTAATGTCGGGGACAGA
TGCTCCCTCGAGGATTCCAGAAGTAAGTGCGCCCGTGACTCACTTGCAAA
ATTCCGTCACCCGTTAACCCTCGGTTTCTCTTTTCCTCTACAGTTCGTGG
ATACAACCCTCTCACACCCCCCAACCTCCTTCAGCATGAGATCGCCATGA
CGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGCTATTGCT
ATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTGTCATCGG
TCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGCGATCGCC
TCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGTCATGCGC
TCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTCTCATCAA
CGACCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTTCGCACCT
CCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCATCGCCAGT
GAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTCTCTCCGT
CGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTGG
CCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGCTCC
CTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTCACCACTT
CCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACCGTGGGCA
ACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCAACTAC
GATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAGGGCAT
GCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAGAAGAACC
ACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCGCCGCT
GGAGAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCAACGAGGG
TATGTTCTACCTTTTTTCCCTCCCCCCAACCCAACACCTTCCATCACACC
ATCCCACTAACATCACCACAACAGGCAACCAAAAGGTTCCTCCCGAGGGC
AAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCATCCACTG
GGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTGCGCACCC
GCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATAAATCGGT
CGCCAGTTGGGATTTGACCCTCTTTTTCTTTTCTCTCTGCATTGCTGTTA
TCATTTGCTCCTATATGGGTTCAACACGTTATGCTCAGTCATACCATTAT
TGTTCACTCGACGCATGGGTTGATTAAGGGATCGGATTTTTCTAGCGGTT
GTTGATTCATTTTTTTTGTTTGTTTTTTTGGATGAGATGAAAAAGTGATG
TCTTTCCGATATTCTATTCTATTTCTTTCGGATTGTAGTACACGTTTTTA
TTCTAGGATTTCGGTGAGGCTAATTATTTCGTGGCTCCTAAATTATGTAT
GGATAGTATTGTGGGATTTCATATATAATGGGACAGATGTCAGCCTTATA
TCATTGGGGTACTTCAACGATACCTTGACAGAAGGTCTCAAGCTTTGAAG
ATACTCATGGTCCCTGGCTTACGTGTCTTAAAAACACAGCCGTCAGTATC
TTAAACACTGTGATGACGGTAATAGAACTAGCATTGTTGAG
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Coding sequence (CDS) from alignment at ch7:3006492..3008632-

>KJC3_010314-T1 ID=KJC3_010314-T1|Name=KJC3_010314-T1|organism=Aspergillus niger KJC3|type=CDS|length=2046bp|location=Sequence derived from alignment at ch7:3006492..3008632- (Aspergillus niger KJC3)
GCAACCAAAAGGTTCCTCCCGAGGGCAAGGCCGGCCTCAAGTACGGTGTC
AGTATCACCGACGCCTGCATCCACTGGGAAGACACGGAACTTGTTCTGGA
GAACCTGGCACAGGCTGTGCGCACCCGCCGGGAAAAGCTTGCTATCAATG
GCAACGGCAACTCCCAATAAATGACGGAGAAGTCCCGGCGAACGGTCATG
GAAGGTCGTGAGGAGGCTATTGCTATCGTCCAGGGCACAGACACCGACCG
TCGCCGTTTGCTGGTTGTCATCGGTCCCTGCTCCATCCACGACCCTGAAA
TGGCCCTCGAATACTGCGATCGCCTCATGAAGATGAAGGAGAAGTACAAG
GATGAGCTGCTGATTGTCATGCGCTCCTACCTCGAGAAGCCCCGTACCAC
CGTCGGCTGGAAGGGTCTCATCAACGACCCCGACATTGACAACAGCTTCA
AGATCAACAAGGGTCTTCGCACCTCCCGTCAACTTTTCGTCGACCTGACC
AACAAGGGTATGCCCATCGCCAGTGAGATGCTCGATACCATCTCCCCCCA
GTTTCTGGCCGACTGTCTCTCCGTCGGCGCCGTTGGTGCTCGCACCACCG
AGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTGTCCTTCCCCGTTGGT
TTCAAGAACGGTACCGACGGCTCCCTGGATGTCGCTGTCGATGCCATTGG
CTCCGTCAAGCACCCTCACCACTTCCTGTCCGTCACCAAGCCCGGTGTCG
CTGCTATCGTCGGCACCGTGGGCAACCCCGACTGCTTCGTCATCCTCCGT
GGTGGCAAGAAGGGCCCCAACTACGATGCCCAGAGCATCGCCGAGGCTAA
GGCCAAGCTGACCGCCCAGGGCATGCCTCCCCGCCTCATGGTCGACTGCA
GCCACGGTAACTCGCAGAAGAACCACAAGAACCAGCCCAAGGTGGCTGCT
GTTCTGGCCGAGCAAATCGCCGCTGGAGAGACCGCCATCATGGGTGTCAT
GATCGAGAGCAACATCAACGAGGGCAACCAAAAGGTTCCTCCCGAGGGCA
AGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCATCCACTGG
GAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTGCGCACCCG
CCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATAAATGACGG
AGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGCTATTGCTATC
GTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTGTCATCGGTCC
CTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGCGATCGCCTCA
TGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGTCATGCGCTCC
TACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTCTCATCAACGA
CCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTTCGCACCTCCC
GTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCATCGCCAGTGAG
ATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTCTCTCCGTCGG
CGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTGGCCT
CGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGCTCCCTG
GATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTCACCACTTCCT
GTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACCGTGGGCAACC
CCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCAACTACGAT
GCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAGGGCATGCC
TCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAGAAGAACCACA
AGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCGCCGCTGGA
GAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCAACGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038493-deoxy-7-phosphoheptulonate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009073aromatic amino acid family biosynthetic process
GO:0009058biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AMT16KJC3_010314Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010314-T1KJC3_010314-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010314-T1.cdsKJC3_010314-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010314-T1.utr3p1KJC3_010314-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010314-T1.exon3KJC3_010314-T1.exon3Aspergillus niger KJC3exon
KJC3_010314-T1.exon2KJC3_010314-T1.exon2Aspergillus niger KJC3exon
KJC3_010314-T1.exon1KJC3_010314-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010314-T1.utr5p2KJC3_010314-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010314-T1.utr5p1KJC3_010314-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR006219
DBxrefInterPro:IPR006218
DBxrefPFAM:PF00793
ProductPhospho-2-dehydro-3-deoxyheptonate aldolase amt16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3006492..3008632 -
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