|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3571099..3572861- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010508-T1 ID=KJC3_010508-T1|Name=KJC3_010508-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1763bp|location=Sequence derived from alignment at ch7:3571099..3572861- (Aspergillus niger KJC3)
AGATATTGTGGCGTGACACTGCATATAAAAAGCAGTTTTGCGCGTGTTTG
TTAGACCTTAAATGCGGACAAAGAGCTGAGCTTAGATTTTGCGTTCAACT
TTCATTTCTTTCCGTCGCGAATCTCTAACTCCGAGTTTACTTCCATTGCC
TCCTAACAAGTTAGGTTTCACCTCGCCTTTGTGGCCACCATCCATCACTG
CGAATAACACTCAAACCAATACATCTCGACTGATCGACGAAAGCTGCGGA
TATTGTCTGTGGGAGAACATAAGGCGACTATGTCAGCTGATTGTGAGTTG
CGACCGTGTCCGGTGGGGTCGGGTGTCGACGATTCTAACACGCTGGTGGA
AAAGCGCCAGCAGAAGTTATGTCAAACATGGCGATAAAGCCACCCGTTGT
TTTAGAACAGCTCTCGGAACCAGACAAGAAACAAAGGGCAATCTTGCTGA
AGAAACTGCACGATGAGCCAGCTTCTAGCCAGCTTCTAGCCTATTTCGAG
AGGTTAAAAGAAGGTTCTGCGACCTGGGATGTCGACACCTATATCGAAGG
GATGAAGCGTTTGGCTAACCTAGTCGGACCTGAGAGAGTCATATACTATG
ACGAGCCCTTGAAAGGCCTCCATTATCCAGACACTTTTGCCGAACTATGG
AACAAAGCGAATCCTCAACAACCTATCACCGTGTATGATCGTGACATCAG
ATATCAATGCCCTCCTAGCTGGTCCAATGGGCTTAAAGATAATCATCAGG
TGTTAACCTACGAAGGCGAAGCACCTTTGGGTCACGGCCTCAATGAGTTG
CTCAAGGGACCGACTACAATTGACTGCGGCATGTGGGTCGCACTTCTACT
GTGGATGGGAATACGATACCTTATAGGAGATGACCTTTTTCACGCTATCT
TCAAATTTGAGAAAGGAGGATTCATTATAACACAGAATTGGGACGAGCCA
ATTAACAAAGCTGGTACAGTTGGCAATCTGCTTTACCCCTTCTACGACAG
TCCAAGTCTGCACAAAATAGCATATTTCTGGGAATCGCAAACTCGCATTC
AAATTAAAACCATTCACAACCACGAAAGCTATTTGGCTAAGCACTTGGGG
GGTCTGAGACGCTTGGAGAATGTCGTCCAAGTCGATGACGACTACATCAT
TTTCGACCCAGGAGCACCTCAAGCCATCTTATCGAGGTCGGGACTTGAGG
AGAAGCTTATGAAGGCTTACAACGCCCCTCAAAGCTTCGCTGATGCTGAA
AGAACCTGGATGTATACTACATTTCCAACTTATGTGCATCCCGACTTTGC
CCCGAAGAACTGGGGATCCCTCGCTGAGGAAGCAAAGAAATATGCGAATC
ATACTTTGAATGAAATCGAATGGGAGGGCAGCAAATCTGACCGAGAAAAT
CAGGATTATCACCTTGTGTTCAACTTTCAAAGACTAATTGATTCTCTTGG
AGAAGCTAGACATGGCTCCTTCAGTGGAGCCGTGAATGGGGATGTTCTCT
CTAGAGCAAAATCACTAAAGCTAGCGGCTGCTTTAGATGGCTTGCTACTG
CAGCTGAGACTGTCTCCATAATAGGCCCGAAAGGTGGTGTGCGGTAGGCG
TCGACGACATTCAGCTCGTTGAAAAAGGCTGGTTCGACTATGCGTAGATA
CATCTATACGTGACAATATATCAGAAAGTTTCATGCCAGGCAGAGGGCAC
TCAACATGTACTGTATCTAGGAACAATTCTCAGTCCTAAAAACTCTCAGT
TACTTGCAATGAC back to topCoding sequence (CDS) from alignment at ch7:3571099..3572861- >KJC3_010508-T1 ID=KJC3_010508-T1|Name=KJC3_010508-T1|organism=Aspergillus niger KJC3|type=CDS|length=2460bp|location=Sequence derived from alignment at ch7:3571099..3572861- (Aspergillus niger KJC3)
CGCCAGCAGAAGTTATGTCAAACATGGCGATAAAGCCACCCGTTGTTTTA
GAACAGCTCTCGGAACCAGACAAGAAACAAAGGGCAATCTTGCTGAAGAA
ACTGCACGATGAGCCAGCTTCTAGCCAGCTTCTAGCCTATTTCGAGAGGT
TAAAAGAAGGTTCTGCGACCTGGGATGTCGACACCTATATCGAAGGGATG
AAGCGTTTGGCTAACCTAGTCGGACCTGAGAGAGTCATATACTATGACGA
GCCCTTGAAAGGCCTCCATTATCCAGACACTTTTGCCGAACTATGGAACA
AAGCGAATCCTCAACAACCTATCACCGTGTATGATCGTGACATCAGATAT
CAATGCCCTCCTAGCTGGTCCAATGGGCTTAAAGATAATCATCAGGTGTT
AACCTACGAAGGCGAAGCACCTTTGGGTCACGGCCTCAATGAGTTGCTCA
AGGGACCGACTACAATTGACTGCGGCATGTGGGTCGCACTTCTACTGTGG
ATGGGAATACGATACCTTATAGGAGATGACCTTTTTCACGCTATCTTCAA
ATTTGAGAAAGGAGGATTCATTATAACACAGAATTGGGACGAGCCAATTA
ACAAAGCTGGTACAGTTGGCAATCTGCTTTACCCCTTCTACGACAGTCCA
AGTCTGCACAAAATAGCATATTTCTGGGAATCGCAAACTCGCATTCAAAT
TAAAACCATTCACAACCACGAAAGCTATTTGGCTAAGCACTTGGGGGGTC
TGAGACGCTTGGAGAATGTCGTCCAAGTCGATGACGACTACATCATTTTC
GACCCAGGAGCACCTCAAGCCATCTTATCGAGGTCGGGACTTGAGGAGAA
GCTTATGAAGGCTTACAACGCCCCTCAAAGCTTCGCTGATGCTGAAAGAA
CCTGGATGTATACTACATTTCCAACTTATGTGCATCCCGACTTTGCCCCG
AAGAACTGGGGATCCCTCGCTGAGGAAGCAAAGAAATATGCGAATCATAC
TTTGAATGAAATCGAATGGGAGGGCAGCAAATCTGACCGAGAAAATCAGG
ATTATCACCTTGTGTTCAACTTTCAAAGACTAATTGATTCTCTTGGAGAA
GCTAGACATGGCTCCTTCAGTGGAGCCGTGAATGGGGATGTTCTCTCTAG
AGCAAAATCACTAAAGCTAGCGGCTGCTTTAGATGGCTTGCTACTGCAGC
TGAGACTGTCTCCATAAATGTCAGCTGATTCGCCAGCAGAAGTTATGTCA
AACATGGCGATAAAGCCACCCGTTGTTTTAGAACAGCTCTCGGAACCAGA
CAAGAAACAAAGGGCAATCTTGCTGAAGAAACTGCACGATGAGCCAGCTT
CTAGCCAGCTTCTAGCCTATTTCGAGAGGTTAAAAGAAGGTTCTGCGACC
TGGGATGTCGACACCTATATCGAAGGGATGAAGCGTTTGGCTAACCTAGT
CGGACCTGAGAGAGTCATATACTATGACGAGCCCTTGAAAGGCCTCCATT
ATCCAGACACTTTTGCCGAACTATGGAACAAAGCGAATCCTCAACAACCT
ATCACCGTGTATGATCGTGACATCAGATATCAATGCCCTCCTAGCTGGTC
CAATGGGCTTAAAGATAATCATCAGGTGTTAACCTACGAAGGCGAAGCAC
CTTTGGGTCACGGCCTCAATGAGTTGCTCAAGGGACCGACTACAATTGAC
TGCGGCATGTGGGTCGCACTTCTACTGTGGATGGGAATACGATACCTTAT
AGGAGATGACCTTTTTCACGCTATCTTCAAATTTGAGAAAGGAGGATTCA
TTATAACACAGAATTGGGACGAGCCAATTAACAAAGCTGGTACAGTTGGC
AATCTGCTTTACCCCTTCTACGACAGTCCAAGTCTGCACAAAATAGCATA
TTTCTGGGAATCGCAAACTCGCATTCAAATTAAAACCATTCACAACCACG
AAAGCTATTTGGCTAAGCACTTGGGGGGTCTGAGACGCTTGGAGAATGTC
GTCCAAGTCGATGACGACTACATCATTTTCGACCCAGGAGCACCTCAAGC
CATCTTATCGAGGTCGGGACTTGAGGAGAAGCTTATGAAGGCTTACAACG
CCCCTCAAAGCTTCGCTGATGCTGAAAGAACCTGGATGTATACTACATTT
CCAACTTATGTGCATCCCGACTTTGCCCCGAAGAACTGGGGATCCCTCGC
TGAGGAAGCAAAGAAATATGCGAATCATACTTTGAATGAAATCGAATGGG
AGGGCAGCAAATCTGACCGAGAAAATCAGGATTATCACCTTGTGTTCAAC
TTTCAAAGACTAATTGATTCTCTTGGAGAAGCTAGACATGGCTCCTTCAG
TGGAGCCGTGAATGGGGATGTTCTCTCTAGAGCAAAATCACTAAAGCTAG
CGGCTGCTTTAGATGGCTTGCTACTGCAGCTGAGACTGTCTCCATAAATG
TCAGCTGATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010508-T1.utr3p1 | KJC3_010508-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010508-T1.utr5p1 | KJC3_010508-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3571099..3572861 - |
|
