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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3652478..3655058- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010535-T1 ID=KJC3_010535-T1|Name=KJC3_010535-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2581bp|location=Sequence derived from alignment at ch7:3652478..3655058- (Aspergillus niger KJC3)
CGCGTTCACAGGTGTCACCGTCGCTGTCTCCTTTGGCAATAATATATTTT
CTGCCACCAACACACGTGCCATCAATCATCATGGGCAGCGCCCCAACGTC
AATATCACTAGCCAACACTAACGCGGCACAATGGAACAGAGACCTTATGC
TCGCGTTTCAGGCTACGTTGGAGAACGACCCTGCAGCGGACCTGATGTCA
ATGTTTCCTGACTTTTACCTCCATGAACATCGAAACGCTCAATATGATCG
ACTATCTTATGCTGCTAAGATCAATTTCCGGTTAATGGAGGACCTCCATG
ATACTCTGAGACACGAACCGGAAGCCAATCTTCTATCAGCGTTCCCAAAG
AATTATTCTCGCAGAATTGGAATGGCGGCGGGACCAAGAACAGATAGAGA
ACAGAAATTCAAGGAAGACGATCCCCCTGAGTTCAGAACTCGCCTCGACC
TTGCGGAGACTGCTACCATCATCTATCCATTGTCCCCAAAAGTGATCGCT
CTACTTGCACAATTTTCAGGGCTGGGAGATGAGCCGACTAGTGCTGGAAA
TTCGCTTATGTTGTCTCTGAAAGGCCTGCTTTGGTCCTCAAAGAAACTTT
GGGAGAACCCTGCCAGAGGTGTGGTGGTTAAGTGTGACGAAGACATTGTC
GCAAAAGCCGTGACTGGAAACAACGATTACACGGAGTACACGAGCATGCA
ATACCTTATGAATCAGGCACCCGATATCCCTGCTCCGAGGCCCCATGGGT
TGGTGGCATTCGGTCCCTTCCGCGTCATATTTATGTCGTACATTCCGGGC
ACCACCCTGGCTCAAACATGGCCCAGCCTGCTACACGAAGAGAAGCTCTC
GATACAACGCCAGCTGGACGATATATTCTGCCGTCTAAGAACACTCCGAC
AAAATAACGATGGTGCGCTTGGCGGAATCTGTGGAGAGGGAGTTAAAGAG
CTTCGCGTCGACGAATGCGCCTTATTCAAGGGTATCACGACAGCGAAGGA
ATTTCAGGATTTGCAGTTTTCCGCTCGTCATCACGGCAGTACCACCTATG
TTAAGCTTCTCCGTTCTTTTCTAGAACACGACGCTTCGACATTGGCGCGC
GGTTCAGTGTTCACACATGGTGATGTCAGAACTAGCAATATAATGGTGAA
ACAGGATCCCTCTTCCGGCGGTCAATATGTTGTTACTGGGATTATCGACT
GGGAGGATAGTGGTTTCTATCCCTTCTACTATGAGTGCACTGTCATGACA
CGTAATTTGAGTTTGGTGGATGAAGATGACTGGTATCTCTATCTGCCAGA
GAGCATTTCTCCGTTGAAGTTTCCTGTGCGGTGGCTGGTCGATCGGCTTT
GGCAGATACATCTCAAGACTACATAGTTCATCGTTTGACCAGTGATTAGG
ATTAAGAGATATGAACTTGTCCTCCCTAGCCCAAATGTCACCATGTATCT
TTGGCCCAAAGACCCGAACAGTGAGCACTGGGCGTGAAGGGATATTGGCC
CCACTAGCCAGGCTCTGTATGCGGTCGGCGGTCGATATTTTAGCCAACCT
ATCCGCGACCGGAGTGATATTGAAGAGTGCATCATTCCAACCCTTCGTGG
ATTCAATAGGTTCTGCCGCACCTATCCTCCTCTCTATTATCGACTGGCCA
CGAAGAAAGTGACGGTATCTACAGCCGCGCAACTGAACAGACGTTATGTT
TTCTTGCCTGTTCAAAGGGGTATGTTCTTTCCCCTAACGGCAAAGAAGAG
TTCTTCTGGAGAAGAGACAAATTTTTAGTGAGGTGGGGTGTTCGCTAGTA
TGGGTGGGAAGATCCCCTAAGGAGGTGGGAGTTCCCTGTTCGGGAGTCTT
CCTGGTTCGTCCTATGAAGCCACGCCTTGATGGTTCGCTCCGTTGTCCAC
CCGACAGCTCCTTCCCGAACGTCGTGCCAAGCGGAACATGGCGGACGGCC
ACGTCTACGACCTACTGAAACTACAACTATATGCAGTACAAATTCAAGAG
CCGGGAGGCATACCGTGTTAATGTGCTCTGTTCTTGAGGGTCGAACTCTA
GAATACTTGAATGGAGCCCTGGCTGCGGCCTGGAAACTGGTACGAAAATA
TCCTTGTCACCTCAGGCCAAGTTCGTTTCTCATCTCTTCTCAGCTTCGAA
GACATCGTGAACATCGCGTGATGTGGCTAAGTGTGAATGGCCGCACAGCT
GTAGATACGATGAATGTAGTAGAGGAAGATGTACGCACGGGATTGGCCAT
TGTCCTCTGGGAGCTGAAAAGCCATCAACCAATCAATCAGTGGGTACCCG
CTAAGAACCCAGGCGGGCCCGGAGTCACGGCGGGTGTGCATGCACATGAT
TGCGGTTGGACAAGTCATTTGGGGAGACCTGGGCGAATGCCCAGTGGAGC
CAAGCCTTCGATTTAGACAGACATAAGTTGATGTAAATAGGTTTTACTAA
CCACCCTATGGCTCATAAGCGGTGGGGCGGTTCCCGTATAGATATCGATT
ATGATAGGATGGGGCGGCGAATCAATAAGACCGAGACTGAGAAGGAGCTG
ATATTTTACGGCGAATGATTGGCTGAGACGG back to topCoding sequence (CDS) from alignment at ch7:3652478..3655058- >KJC3_010535-T1 ID=KJC3_010535-T1|Name=KJC3_010535-T1|organism=Aspergillus niger KJC3|type=CDS|length=1296bp|location=Sequence derived from alignment at ch7:3652478..3655058- (Aspergillus niger KJC3)
ATGGGCAGCGCCCCAACGTCAATATCACTAGCCAACACTAACGCGGCACA
ATGGAACAGAGACCTTATGCTCGCGTTTCAGGCTACGTTGGAGAACGACC
CTGCAGCGGACCTGATGTCAATGTTTCCTGACTTTTACCTCCATGAACAT
CGAAACGCTCAATATGATCGACTATCTTATGCTGCTAAGATCAATTTCCG
GTTAATGGAGGACCTCCATGATACTCTGAGACACGAACCGGAAGCCAATC
TTCTATCAGCGTTCCCAAAGAATTATTCTCGCAGAATTGGAATGGCGGCG
GGACCAAGAACAGATAGAGAACAGAAATTCAAGGAAGACGATCCCCCTGA
GTTCAGAACTCGCCTCGACCTTGCGGAGACTGCTACCATCATCTATCCAT
TGTCCCCAAAAGTGATCGCTCTACTTGCACAATTTTCAGGGCTGGGAGAT
GAGCCGACTAGTGCTGGAAATTCGCTTATGTTGTCTCTGAAAGGCCTGCT
TTGGTCCTCAAAGAAACTTTGGGAGAACCCTGCCAGAGGTGTGGTGGTTA
AGTGTGACGAAGACATTGTCGCAAAAGCCGTGACTGGAAACAACGATTAC
ACGGAGTACACGAGCATGCAATACCTTATGAATCAGGCACCCGATATCCC
TGCTCCGAGGCCCCATGGGTTGGTGGCATTCGGTCCCTTCCGCGTCATAT
TTATGTCGTACATTCCGGGCACCACCCTGGCTCAAACATGGCCCAGCCTG
CTACACGAAGAGAAGCTCTCGATACAACGCCAGCTGGACGATATATTCTG
CCGTCTAAGAACACTCCGACAAAATAACGATGGTGCGCTTGGCGGAATCT
GTGGAGAGGGAGTTAAAGAGCTTCGCGTCGACGAATGCGCCTTATTCAAG
GGTATCACGACAGCGAAGGAATTTCAGGATTTGCAGTTTTCCGCTCGTCA
TCACGGCAGTACCACCTATGTTAAGCTTCTCCGTTCTTTTCTAGAACACG
ACGCTTCGACATTGGCGCGCGGTTCAGTGTTCACACATGGTGATGTCAGA
ACTAGCAATATAATGGTGAAACAGGATCCCTCTTCCGGCGGTCAATATGT
TGTTACTGGGATTATCGACTGGGAGGATAGTGGTTTCTATCCCTTCTACT
ATGAGTGCACTGTCATGACACGTAATTTGAGTTTGGTGGATGAAGATGAC
TGGTATCTCTATCTGCCAGAGAGCATTTCTCCGTTGAAGTTTCCTGTGCG
GTGGCTGGTCGATCGGCTTTGGCAGATACATCTCAAGACTACATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010535-T1.utr5p1 | KJC3_010535-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3652478..3655058 - |
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