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KJC3_010562-T1, KJC3_010562-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010562-T1
Unique NameKJC3_010562-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3743440..3744689+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010562-T1 ID=KJC3_010562-T1|Name=KJC3_010562-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1250bp|location=Sequence derived from alignment at ch7:3743440..3744689+ (Aspergillus niger KJC3)
ATGATCCAAACCCACCACCGCACCGCCACCCCGAAAGGCCTCTCCTCCAT
CACCACCCTCCTCACGACCCCCGGCGCATCCCTCCTCATCGACCACCCTT
TCCTCCTCATCGACCACCCTTTCCTCCTCATCGACCACCCTTTCCTCCTC
ATCGACCACCCTTTCCTCCTCGCAGATGCCCAGTCCACCATACACTGGAT
AAAATCCCTAACTCCCCACGCCCCCACTGCCATCTTCCTCACCCACCACC
ACCCAGACCACTTCTTCTCCGCGAATCCCATTCTGGCCGCCTTCCCAGAC
GCCAAATTCTACGCCGCTCCCTACGTCTGCTCCCGCATCAACGCCGAATA
CGATCAGAAAGCCAAATACTGGCCCGCGGTGCTCGGCACCGACGCCGTTC
CCGCTGCGCCCCGCAAGCCGGACCCGTACTTGTCGAGCTTCTTCCTGCTG
GACGGGTCTCCCGTTGTGCTGCTGGGTCCGGTGCAGGGCGATTGTGTGGA
TCAGACGGTTTTTTGGGTCCCCGAGAGTAGGACGGTTGTTGCGGGTGATG
TCGTGTTTGGGAGGAGTGTGCATGTTTGGTATGTTTCTCTTATTTCCTGT
CTCTTTCTTCAGAAAGTTCCCCTTCTTGGTTAAACTTTCGGAAAGGGAGG
CCCAAATTAAGACCAATTGGCTGGCTTATATCTACAATATCTACGCATAC
ATCTACTTACTGAATTATACTAATATACAGGGTCGAAGAACTCGAATCAC
CCGCTCTCGTGCATTCATGGCTCAAAACCCTCGACATGATCGACCACCTA
CACCCGCAGAAGATCATCCCAGGTCATATGGAAGAAGGATGGGAGTTGGA
TGTCAAGGCGGATCTAGACCACACGAGGCGCTATCTACGGTTGTTTGCGG
AGAAAGTCACCTATGCGTCTGGCAGTGGTGGTGGCAAACCTTCTGTGCAA
GAGCTATATGATACCTTCCGGGAGGCGTTCCCTGAGTGTCGGGAGAATCT
GGAATTCTTTTTGGGACATATGGCGAATCGGTTTGGCCAGGGGGAAAGGT
ATGGGAGGAGAATCGGCATGAGGATGTCGGGGAGAGGACTTTTGAGGATT
TGAATGGGTACTGGTTTGGCTGAATTCCTTTTCTCCCTTTCTATTCTCGG
CTTGGGTTATAGAGGGAGGTGTTGGTGGAAGGTATGTGTATGTATCTACT
ACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTAC
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Coding sequence (CDS) from alignment at ch7:3743440..3744689+

>KJC3_010562-T1 ID=KJC3_010562-T1|Name=KJC3_010562-T1|organism=Aspergillus niger KJC3|type=CDS|length=1902bp|location=Sequence derived from alignment at ch7:3743440..3744689+ (Aspergillus niger KJC3)
ATGATCCAAACCCACCACCGCACCGCCACCCCGAAAGGCCTCTCCTCCAT
CACCACCCTCCTCACGACCCCCGGCGCATCCCTCCTCATCGACCACCCTT
TCCTCCTCATCGACCACCCTTTCCTCCTCATCGACCACCCTTTCCTCCTC
ATCGACCACCCTTTCCTCCTCGCAGATGCCCAGTCCACCATACACTGGAT
AAAATCCCTAACTCCCCACGCCCCCACTGCCATCTTCCTCACCCACCACC
ACCCAGACCACTTCTTCTCCGCGAATCCCATTCTGGCCGCCTTCCCAGAC
GCCAAATTCTACGCCGCTCCCTACGTCTGCTCCCGCATCAACGCCGAATA
CGATCAGAAAGCCAAATACTGGCCCGCGGTGCTCGGCACCGACGCCGTTC
CCGCTGCGCCCCGCAAGCCGGACCCGTACTTGTCGAGCTTCTTCCTGCTG
GACGGGTCTCCCGTTGTGCTGCTGGGTCCGGTGCAGGGCGATTGTGTGGA
TCAGACGGTTTTTTGGGTCCCCGAGAGTAGGACGGTTGTTGCGGGTGATG
TCGTGTTTGGGAGGAGTGTGCATGTTTGGGTCGAAGAACTCGAATCACCC
GCTCTCGTGCATTCATGGCTCAAAACCCTCGACATGATCGACCACCTACA
CCCGCAGAAGATCATCCCAGGTCATATGGAAGAAGGATGGGAGTTGGATG
TCAAGGCGGATCTAGACCACACGAGGCGCTATCTACGGTTGTTTGCGGAG
AAAGTCACCTATGCGTCTGGCAGTGGTGGTGGCAAACCTTCTGTGCAAGA
GCTATATGATACCTTCCGGGAGGCGTTCCCTGAGTGTCGGGAGAATCTGG
AATTCTTTTTGGGACATATGGCGAATCGGTTTGGCCAGGGGGAAAGGTAT
GGGAGGAGAATCGGCATGAGGATGTCGGGGAGAGGACTTTTGAGGATTTG
AATGATCCAAACCCACCACCGCACCGCCACCCCGAAAGGCCTCTCCTCCA
TCACCACCCTCCTCACGACCCCCGGCGCATCCCTCCTCATCGACCACCCT
TTCCTCCTCATCGACCACCCTTTCCTCCTCATCGACCACCCTTTCCTCCT
CATCGACCACCCTTTCCTCCTCGCAGATGCCCAGTCCACCATACACTGGA
TAAAATCCCTAACTCCCCACGCCCCCACTGCCATCTTCCTCACCCACCAC
CACCCAGACCACTTCTTCTCCGCGAATCCCATTCTGGCCGCCTTCCCAGA
CGCCAAATTCTACGCCGCTCCCTACGTCTGCTCCCGCATCAACGCCGAAT
ACGATCAGAAAGCCAAATACTGGCCCGCGGTGCTCGGCACCGACGCCGTT
CCCGCTGCGCCCCGCAAGCCGGACCCGTACTTGTCGAGCTTCTTCCTGCT
GGACGGGTCTCCCGTTGTGCTGCTGGGTCCGGTGCAGGGCGATTGTGTGG
ATCAGACGGTTTTTTGGGTCCCCGAGAGTAGGACGGTTGTTGCGGGTGAT
GTCGTGTTTGGGAGGAGTGTGCATGTTTGGGTCGAAGAACTCGAATCACC
CGCTCTCGTGCATTCATGGCTCAAAACCCTCGACATGATCGACCACCTAC
ACCCGCAGAAGATCATCCCAGGTCATATGGAAGAAGGATGGGAGTTGGAT
GTCAAGGCGGATCTAGACCACACGAGGCGCTATCTACGGTTGTTTGCGGA
GAAAGTCACCTATGCGTCTGGCAGTGGTGGTGGCAAACCTTCTGTGCAAG
AGCTATATGATACCTTCCGGGAGGCGTTCCCTGAGTGTCGGGAGAATCTG
GAATTCTTTTTGGGACATATGGCGAATCGGTTTGGCCAGGGGGAAAGGTA
TGGGAGGAGAATCGGCATGAGGATGTCGGGGAGAGGACTTTTGAGGATTT
GA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010562KJC3_010562Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010562-T1.exon1KJC3_010562-T1.exon1Aspergillus niger KJC3exon
KJC3_010562-T1.exon2KJC3_010562-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010562-T1.cdsKJC3_010562-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010562-T1.utr3p1KJC3_010562-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010562-T1KJC3_010562-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036866
DBxrefInterPro:IPR001279
DBxrefPFAM:PF00753
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3743440..3744689 +
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