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KJC3_010598-T2, KJC3_010598-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010598-T2
Unique NameKJC3_010598-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3831212..3833010+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010598-T2 ID=KJC3_010598-T2|Name=KJC3_010598-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1799bp|location=Sequence derived from alignment at ch7:3831212..3833010+ (Aspergillus niger KJC3)
CCCAGCCTGTCCTTGTCTCCAGTCGGCCATTATCTTGCTATTAGAAAAAG
CAATTGGCCATGTCTTTCAATAGGAAGTATGCTGGTCTTCCCGACCTGGT
ACGTTACATCTACCATACCTCCCTCCTGCCCCATCTTAATCAACCGACTA
CTAACATCGTTTGTTTGGGCCAGGATCTCGCTCCGGATATCTACGAGACC
CCCGATCTGACCGACGAAGCATCTACCGTTCCGGTTAGCTACCCCGCCTC
ACGCCTGCGTCTGCCTTTTCCAATGCTTCTAGCTGCTCATCCTTGACACT
ACACTCTATAGACTACAACTATCCGCACCGCATCCAACGTAGACGATGAC
GCCGGCTCCAACTCCGACATCGACCGGCAGGGGATCAATGCAGACGAGGC
ACGCGCCCACTTCTTAGGAGCCACGGTCGACGCGCGCGATGTCAACTTCT
CCGACAGTATCGCGATGAAGCGGAAGGCATACAAGAACAAGAACCGTCGC
CGGCGCAGAAATGAGAACGGTTCACAAGAGCCCGAAGACATCAGCGACAG
CGAAGAGGAAAGCCTAGAGAGGAAGCTCGCCCGCCTTCGCAGGGAAGTGG
AGGAACTGAAAGACGAGATGGCCGCTCGACAGACCGAAACCGAACCGGAA
GCCGCAGAAGGGAAGGAGCCCACGGACGACGGCGTCCTCGAATTGAGCCG
CGCCCTGGACAACCTCTATACCTCCCGCAGCGACAACACGGGGCCACACT
CCGCAGCTGCAATCCTAGCACAAAAGATTGCAACCAAATCCACATCCGAA
ACCGCTGCACTCAGCACCCAGAACGCAGGCGCCACACAACAACCCGAACC
CACAGCTCCGTCATCCTCGGGTGTCCTTGCCCACGCCGCAGCATTCGACG
GCCGCCTCGCCCTCATCGAAGCCGCCATGGGCATCTCCAGCTCCTCCAAC
CCCTTCGTCAGCGACGGCATCTCCGAACCCGCCCTCCAGCCCGTCCTCCC
AGCCGTCGACCACCTCACATCCCGCCTCACCACCCTCATGAACATCCTTG
TCGGCCCGAACCCCGTCTCCGCCGTGCCAACAATGGGCTCCGCACCCCCC
TCCACAACAGTCACCACCCCGCATCTCGAGACCCTCTCCACTCGAGTCCG
CAAACTCACCGCAGACACAGAAGCCCTCGCATCCGCGCGGAAACGTGCCG
TGGACGCCGCCAAGGCAGCTCAGAACGCGCGCATCGCTTCCGCCGCTATC
GAGCCCTCAGACATGTCCGTCTCGTCATCCTCCGCTACGGAAGTCGACCC
GGCTGCTACGCAGCGCGATGAACAAGCTACCAAGATCCAGGCCCTCTACG
CTACTCTCCCCACCATTCAGTCCCTCCATCCCATCCTTCCCAGCGTGCTG
GAGCGGCTTCGCTCCCTTCGCGCTATCCATGCGGGTGCTGCACAGGCTTC
GGAGTCACTCGATACGCTGGAGAAGAGACAGGCGGATATGGCAAGGGAGA
TTGAGCAGTGGCGCGAGGGTCTGCAGGTAGTCGAGGAGAAGATGGGCCAG
GGCGAAGCAGCGATGAAGAGTAATATCGAGCTTGTCGAACCTTGGGTTCG
GGATCTGGAGGCGCGGCTGGGTCGGTTGGAGGGGCAGGGCGCATGATTTG
GAAGATTGTGGATTAGTATGAACATATAACTACTAAACTTCTTGTAACTG
TAGCTGGTTGATAGTAGTACTGAGTACCCATATATCATTTGTCAAGCGAA
ATACCATCAGCAATTGCGATAGCAATCGAAATTCAATAGTATAGATACA
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Coding sequence (CDS) from alignment at ch7:3831212..3833010+

>KJC3_010598-T2 ID=KJC3_010598-T2|Name=KJC3_010598-T2|organism=Aspergillus niger KJC3|type=CDS|length=1182bp|location=Sequence derived from alignment at ch7:3831212..3833010+ (Aspergillus niger KJC3)
ATGAAGCGGAAGGCATACAAGAACAAGAACCGTCGCCGGCGCAGAAATGA
GAACGGTTCACAAGAGCCCGAAGACATCAGCGACAGCGAAGAGGAAAGCC
TAGAGAGGAAGCTCGCCCGCCTTCGCAGGGAAGTGGAGGAACTGAAAGAC
GAGATGGCCGCTCGACAGACCGAAACCGAACCGGAAGCCGCAGAAGGGAA
GGAGCCCACGGACGACGGCGTCCTCGAATTGAGCCGCGCCCTGGACAACC
TCTATACCTCCCGCAGCGACAACACGGGGCCACACTCCGCAGCTGCAATC
CTAGCACAAAAGATTGCAACCAAATCCACATCCGAAACCGCTGCACTCAG
CACCCAGAACGCAGGCGCCACACAACAACCCGAACCCACAGCTCCGTCAT
CCTCGGGTGTCCTTGCCCACGCCGCAGCATTCGACGGCCGCCTCGCCCTC
ATCGAAGCCGCCATGGGCATCTCCAGCTCCTCCAACCCCTTCGTCAGCGA
CGGCATCTCCGAACCCGCCCTCCAGCCCGTCCTCCCAGCCGTCGACCACC
TCACATCCCGCCTCACCACCCTCATGAACATCCTTGTCGGCCCGAACCCC
GTCTCCGCCGTGCCAACAATGGGCTCCGCACCCCCCTCCACAACAGTCAC
CACCCCGCATCTCGAGACCCTCTCCACTCGAGTCCGCAAACTCACCGCAG
ACACAGAAGCCCTCGCATCCGCGCGGAAACGTGCCGTGGACGCCGCCAAG
GCAGCTCAGAACGCGCGCATCGCTTCCGCCGCTATCGAGCCCTCAGACAT
GTCCGTCTCGTCATCCTCCGCTACGGAAGTCGACCCGGCTGCTACGCAGC
GCGATGAACAAGCTACCAAGATCCAGGCCCTCTACGCTACTCTCCCCACC
ATTCAGTCCCTCCATCCCATCCTTCCCAGCGTGCTGGAGCGGCTTCGCTC
CCTTCGCGCTATCCATGCGGGTGCTGCACAGGCTTCGGAGTCACTCGATA
CGCTGGAGAAGAGACAGGCGGATATGGCAAGGGAGATTGAGCAGTGGCGC
GAGGGTCTGCAGGTAGTCGAGGAGAAGATGGGCCAGGGCGAAGCAGCGAT
GAAGAGTAATATCGAGCTTGTCGAACCTTGGGTTCGGGATCTGGAGGCGC
GGCTGGGTCGGTTGGAGGGGCAGGGCGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005869dynactin complex
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010598KJC3_010598Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010598-T2KJC3_010598-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010598-T2.utr5p1KJC3_010598-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010598-T2.utr5p2KJC3_010598-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010598-T2.exon1KJC3_010598-T2.exon1Aspergillus niger KJC3exon
KJC3_010598-T2.exon2KJC3_010598-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010598-T2.cdsKJC3_010598-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010598-T2.utr3p1KJC3_010598-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR028133
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3831212..3833010 +
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