You are here

Home

KJC3_010623-T1, KJC3_010623-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010623-T1
Unique NameKJC3_010623-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3893098..3894897+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010623-T1 ID=KJC3_010623-T1|Name=KJC3_010623-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1800bp|location=Sequence derived from alignment at ch7:3893098..3894897+ (Aspergillus niger KJC3)
GCCTGCTTCTTGCTTTCTGAACTGAACTAGACTCAACTTCAGTTCTGCCT
GTTGTGGCGTTTGATTCAGCCTTGTCGGAAGCCTTCTTTCACCCCTGCTG
TGTTGGGAGTTTTGTTATGTCTCTTGCAATAAAACCAATTAACAAGATTT
TCCTGTCTCCTCAAGTGTGTCCCTCCGTCTTCTGTTATCACCTTCCTCAT
GCCGACCTTCAAGCGCAAAGCCAGGAAGCCCAGAGCATGCGTCAAAACCG
GTGGACTCTGGAATGATGAAGAAAGGCAGCGCCTGTGGGATCAGCGGTCG
TTGTACCGCCACATGCACTGGAAGCCATTTGGCAAGGTGTGCATAGCTTG
TTCCTTTCCTTTCATATATCACCCTCTCCACCCATGGTGGCATACTGACT
CTACGCAGATATTCTTCCCCCATAGAAGTCTAAACGCTCTTCAGAAGGCA
TATTCCGTATGTCATGTTATGCTCCCACTACCAGGACCTACCTGACTTTC
GCAATAGAATATGAGTATACAGAGAAGACTAACAGCCAACATGGTATGTT
TGGCCCAATTCACCTCCCTATATTGATATCTATCGTACTAATGTTGCAGT
CAAACCCTGATACCCCTCAGGATCCTCCTGCAGGCCGCATTGTAACGCTA
CGAACAAGGGCCAACAAACGTTCACTGCCTGACGAAAGCGCGCCTGAGAG
CCGTCCGGGGAAGCAGACCAGAACAGCTGCGGTCCTTTCTTCGGGGAAGG
ACCAAGTGGAAGAAACGGATCAAAATGGCATGACAGACGAGGATAGCTCT
TCGGACTATGAACAAGACTCCGATGAAGAGACGCTTCAGGGGCCCAGTCT
ACCTTTTGAAGAAGAAGAAAGTCAAGATGGAATCGAGACAATCGTTATCG
ATGATGGGAACAATGATCCTGAAAGCCACCAGAACGGTGAAGAAGAAGCA
GAGGTACACAGGCCTGATGCCGAGGAAAATACTGATGAGCCTGTCTCTCG
CTCCACAGTAAGTGAAACGATACACATGCTCACTAGTCTTGTGTCAAGCT
TACAGACTCATCCTAGACGGGCGTTTCCAGCAATAACCCCCCTCCTACAG
GACTCATGCCTGGACGGAAAAGCATGACACCAAGTTCAAGAAGTGAAGAA
AAATACGCAGGCTACGAGAAGCTTGCAAAAGAGGCGACTGAGCCCACTAG
GCCTTCACTCCCACCGGACGTACAATATCTCAAAAATCTCACATGGAGGT
TTGAAACTGTATTTTTCAAGACGCATGATCAGGAGAAAGTCATCTCCTCA
CTGCAAAGCCAGGTTGAGGATCTCAAAAATCTCAACTCAGACAAGGCTGC
GAAGCTGGAGTCCGCACAAGAGGAGGTTAGGAAACAACTCCAGACTATAA
GATCCCTCGAACAACGCGAGCAGAAGTATAAAAAGGAGATCGATGACTGG
AAACGCAAGATCAAAGTTTCCGAACAGCAAGTCACCGTCCTCGAGTGCAA
GGTAGCTATGGCTCGAAACCAGAATAAATGTGAGACGTGTGAGAGGGTCT
CCAAGTTTTTCGCACCGGCTTCCGCCTCAGGGAAGGCCGGTGAGTCTTCT
GGCAGCTCAATTTCATGAAACATTCGGTTTCAACTGATTTGATATTATAC
TCAGCTTCTTTCGCATCATTATGGGGCGGTATCTATGCACGGTCTCCCCT
TATTTTATAGTCATACGAACATTTTGCAGTTTGATATATAATAGCAGGCC
CATTTATGTTGTATTAGCAAGCCCTCTCTTATTGCATAAATGTACCAGAC
back to top

Coding sequence (CDS) from alignment at ch7:3893098..3894897+

>KJC3_010623-T1 ID=KJC3_010623-T1|Name=KJC3_010623-T1|organism=Aspergillus niger KJC3|type=CDS|length=5910bp|location=Sequence derived from alignment at ch7:3893098..3894897+ (Aspergillus niger KJC3)
ATGCCGACCTTCAAGCGCAAAGCCAGGAAGCCCAGAGCATGCGTCAAAAC
CGGTGGACTCTGGAATGATGAAGAAAGGCAGCGCCTGTGGGATCAGCGGT
CGTTGTACCGCCACATGCACTGGAAGCCATTTGGCAAGATATTCTTCCCC
CATAGAAGTCTAAACGCTCTTCAGAAGGCATATTCCAATATGAGTATACA
GAGAAGACTAACAGCCAACATGTCAAACCCTGATACCCCTCAGGATCCTC
CTGCAGGCCGCATTGTAACGCTACGAACAAGGGCCAACAAACGTTCACTG
CCTGACGAAAGCGCGCCTGAGAGCCGTCCGGGGAAGCAGACCAGAACAGC
TGCGGTCCTTTCTTCGGGGAAGGACCAAGTGGAAGAAACGGATCAAAATG
GCATGACAGACGAGGATAGCTCTTCGGACTATGAACAAGACTCCGATGAA
GAGACGCTTCAGGGGCCCAGTCTACCTTTTGAAGAAGAAGAAAGTCAAGA
TGGAATCGAGACAATCGTTATCGATGATGGGAACAATGATCCTGAAAGCC
ACCAGAACGGTGAAGAAGAAGCAGAGGTACACAGGCCTGATGCCGAGGAA
AATACTGATGAGCCTGTCTCTCGCTCCACAACGGGCGTTTCCAGCAATAA
CCCCCCTCCTACAGGACTCATGCCTGGACGGAAAAGCATGACACCAAGTT
CAAGAAGTGAAGAAAAATACGCAGGCTACGAGAAGCTTGCAAAAGAGGCG
ACTGAGCCCACTAGGCCTTCACTCCCACCGGACGTACAATATCTCAAAAA
TCTCACATGGAGGTTTGAAACTGTATTTTTCAAGACGCATGATCAGGAGA
AAGTCATCTCCTCACTGCAAAGCCAGGTTGAGGATCTCAAAAATCTCAAC
TCAGACAAGGCTGCGAAGCTGGAGTCCGCACAAGAGGAGGTTAGGAAACA
ACTCCAGACTATAAGATCCCTCGAACAACGCGAGCAGAAGTATAAAAAGG
AGATCGATGACTGGAAACGCAAGATCAAAGTTTCCGAACAGCAAGTCACC
GTCCTCGAGTGCAAGGTAGCTATGGCTCGAAACCAGAATAAATGTGAGAC
GTGTGAGAGGGTCTCCAAGTTTTTCGCACCGGCTTCCGCCTCAGGGAAGG
CCGGTGAGTCTTCTGGCAGCTCAATTTCATGAATGCCGACCTTCAAGCGC
AAAGCCAGGAAGCCCAGAGCATGCGTCAAAACCGGTGGACTCTGGAATGA
TGAAGAAAGGCAGCGCCTGTGGGATCAGCGGTCGTTGTACCGCCACATGC
ACTGGAAGCCATTTGGCAAGATATTCTTCCCCCATAGAAGTCTAAACGCT
CTTCAGAAGGCATATTCCAATATGAGTATACAGAGAAGACTAACAGCCAA
CATGTCAAACCCTGATACCCCTCAGGATCCTCCTGCAGGCCGCATTGTAA
CGCTACGAACAAGGGCCAACAAACGTTCACTGCCTGACGAAAGCGCGCCT
GAGAGCCGTCCGGGGAAGCAGACCAGAACAGCTGCGGTCCTTTCTTCGGG
GAAGGACCAAGTGGAAGAAACGGATCAAAATGGCATGACAGACGAGGATA
GCTCTTCGGACTATGAACAAGACTCCGATGAAGAGACGCTTCAGGGGCCC
AGTCTACCTTTTGAAGAAGAAGAAAGTCAAGATGGAATCGAGACAATCGT
TATCGATGATGGGAACAATGATCCTGAAAGCCACCAGAACGGTGAAGAAG
AAGCAGAGGTACACAGGCCTGATGCCGAGGAAAATACTGATGAGCCTGTC
TCTCGCTCCACAACGGGCGTTTCCAGCAATAACCCCCCTCCTACAGGACT
CATGCCTGGACGGAAAAGCATGACACCAAGTTCAAGAAGTGAAGAAAAAT
ACGCAGGCTACGAGAAGCTTGCAAAAGAGGCGACTGAGCCCACTAGGCCT
TCACTCCCACCGGACGTACAATATCTCAAAAATCTCACATGGAGGTTTGA
AACTGTATTTTTCAAGACGCATGATCAGGAGAAAGTCATCTCCTCACTGC
AAAGCCAGGTTGAGGATCTCAAAAATCTCAACTCAGACAAGGCTGCGAAG
CTGGAGTCCGCACAAGAGGAGGTTAGGAAACAACTCCAGACTATAAGATC
CCTCGAACAACGCGAGCAGAAGTATAAAAAGGAGATCGATGACTGGAAAC
GCAAGATCAAAGTTTCCGAACAGCAAGTCACCGTCCTCGAGTGCAAGGTA
GCTATGGCTCGAAACCAGAATAAATGTGAGACGTGTGAGAGGGTCTCCAA
GTTTTTCGCACCGGCTTCCGCCTCAGGGAAGGCCGGTGAGTCTTCTGGCA
GCTCAATTTCATGAATGCCGACCTTCAAGCGCAAAGCCAGGAAGCCCAGA
GCATGCGTCAAAACCGGTGGACTCTGGAATGATGAAGAAAGGCAGCGCCT
GTGGGATCAGCGGTCGTTGTACCGCCACATGCACTGGAAGCCATTTGGCA
AGATATTCTTCCCCCATAGAAGTCTAAACGCTCTTCAGAAGGCATATTCC
AATATGAGTATACAGAGAAGACTAACAGCCAACATGTCAAACCCTGATAC
CCCTCAGGATCCTCCTGCAGGCCGCATTGTAACGCTACGAACAAGGGCCA
ACAAACGTTCACTGCCTGACGAAAGCGCGCCTGAGAGCCGTCCGGGGAAG
CAGACCAGAACAGCTGCGGTCCTTTCTTCGGGGAAGGACCAAGTGGAAGA
AACGGATCAAAATGGCATGACAGACGAGGATAGCTCTTCGGACTATGAAC
AAGACTCCGATGAAGAGACGCTTCAGGGGCCCAGTCTACCTTTTGAAGAA
GAAGAAAGTCAAGATGGAATCGAGACAATCGTTATCGATGATGGGAACAA
TGATCCTGAAAGCCACCAGAACGGTGAAGAAGAAGCAGAGGTACACAGGC
CTGATGCCGAGGAAAATACTGATGAGCCTGTCTCTCGCTCCACAACGGGC
GTTTCCAGCAATAACCCCCCTCCTACAGGACTCATGCCTGGACGGAAAAG
CATGACACCAAGTTCAAGAAGTGAAGAAAAATACGCAGGCTACGAGAAGC
TTGCAAAAGAGGCGACTGAGCCCACTAGGCCTTCACTCCCACCGGACGTA
CAATATCTCAAAAATCTCACATGGAGGTTTGAAACTGTATTTTTCAAGAC
GCATGATCAGGAGAAAGTCATCTCCTCACTGCAAAGCCAGGTTGAGGATC
TCAAAAATCTCAACTCAGACAAGGCTGCGAAGCTGGAGTCCGCACAAGAG
GAGGTTAGGAAACAACTCCAGACTATAAGATCCCTCGAACAACGCGAGCA
GAAGTATAAAAAGGAGATCGATGACTGGAAACGCAAGATCAAAGTTTCCG
AACAGCAAGTCACCGTCCTCGAGTGCAAGGTAGCTATGGCTCGAAACCAG
AATAAATGTGAGACGTGTGAGAGGGTCTCCAAGTTTTTCGCACCGGCTTC
CGCCTCAGGGAAGGCCGGTGAGTCTTCTGGCAGCTCAATTTCATGAATGC
CGACCTTCAAGCGCAAAGCCAGGAAGCCCAGAGCATGCGTCAAAACCGGT
GGACTCTGGAATGATGAAGAAAGGCAGCGCCTGTGGGATCAGCGGTCGTT
GTACCGCCACATGCACTGGAAGCCATTTGGCAAGATATTCTTCCCCCATA
GAAGTCTAAACGCTCTTCAGAAGGCATATTCCAATATGAGTATACAGAGA
AGACTAACAGCCAACATGTCAAACCCTGATACCCCTCAGGATCCTCCTGC
AGGCCGCATTGTAACGCTACGAACAAGGGCCAACAAACGTTCACTGCCTG
ACGAAAGCGCGCCTGAGAGCCGTCCGGGGAAGCAGACCAGAACAGCTGCG
GTCCTTTCTTCGGGGAAGGACCAAGTGGAAGAAACGGATCAAAATGGCAT
GACAGACGAGGATAGCTCTTCGGACTATGAACAAGACTCCGATGAAGAGA
CGCTTCAGGGGCCCAGTCTACCTTTTGAAGAAGAAGAAAGTCAAGATGGA
ATCGAGACAATCGTTATCGATGATGGGAACAATGATCCTGAAAGCCACCA
GAACGGTGAAGAAGAAGCAGAGGTACACAGGCCTGATGCCGAGGAAAATA
CTGATGAGCCTGTCTCTCGCTCCACAACGGGCGTTTCCAGCAATAACCCC
CCTCCTACAGGACTCATGCCTGGACGGAAAAGCATGACACCAAGTTCAAG
AAGTGAAGAAAAATACGCAGGCTACGAGAAGCTTGCAAAAGAGGCGACTG
AGCCCACTAGGCCTTCACTCCCACCGGACGTACAATATCTCAAAAATCTC
ACATGGAGGTTTGAAACTGTATTTTTCAAGACGCATGATCAGGAGAAAGT
CATCTCCTCACTGCAAAGCCAGGTTGAGGATCTCAAAAATCTCAACTCAG
ACAAGGCTGCGAAGCTGGAGTCCGCACAAGAGGAGGTTAGGAAACAACTC
CAGACTATAAGATCCCTCGAACAACGCGAGCAGAAGTATAAAAAGGAGAT
CGATGACTGGAAACGCAAGATCAAAGTTTCCGAACAGCAAGTCACCGTCC
TCGAGTGCAAGGTAGCTATGGCTCGAAACCAGAATAAATGTGAGACGTGT
GAGAGGGTCTCCAAGTTTTTCGCACCGGCTTCCGCCTCAGGGAAGGCCGG
TGAGTCTTCTGGCAGCTCAATTTCATGAATGCCGACCTTCAAGCGCAAAG
CCAGGAAGCCCAGAGCATGCGTCAAAACCGGTGGACTCTGGAATGATGAA
GAAAGGCAGCGCCTGTGGGATCAGCGGTCGTTGTACCGCCACATGCACTG
GAAGCCATTTGGCAAGATATTCTTCCCCCATAGAAGTCTAAACGCTCTTC
AGAAGGCATATTCCAATATGAGTATACAGAGAAGACTAACAGCCAACATG
TCAAACCCTGATACCCCTCAGGATCCTCCTGCAGGCCGCATTGTAACGCT
ACGAACAAGGGCCAACAAACGTTCACTGCCTGACGAAAGCGCGCCTGAGA
GCCGTCCGGGGAAGCAGACCAGAACAGCTGCGGTCCTTTCTTCGGGGAAG
GACCAAGTGGAAGAAACGGATCAAAATGGCATGACAGACGAGGATAGCTC
TTCGGACTATGAACAAGACTCCGATGAAGAGACGCTTCAGGGGCCCAGTC
TACCTTTTGAAGAAGAAGAAAGTCAAGATGGAATCGAGACAATCGTTATC
GATGATGGGAACAATGATCCTGAAAGCCACCAGAACGGTGAAGAAGAAGC
AGAGGTACACAGGCCTGATGCCGAGGAAAATACTGATGAGCCTGTCTCTC
GCTCCACAACGGGCGTTTCCAGCAATAACCCCCCTCCTACAGGACTCATG
CCTGGACGGAAAAGCATGACACCAAGTTCAAGAAGTGAAGAAAAATACGC
AGGCTACGAGAAGCTTGCAAAAGAGGCGACTGAGCCCACTAGGCCTTCAC
TCCCACCGGACGTACAATATCTCAAAAATCTCACATGGAGGTTTGAAACT
GTATTTTTCAAGACGCATGATCAGGAGAAAGTCATCTCCTCACTGCAAAG
CCAGGTTGAGGATCTCAAAAATCTCAACTCAGACAAGGCTGCGAAGCTGG
AGTCCGCACAAGAGGAGGTTAGGAAACAACTCCAGACTATAAGATCCCTC
GAACAACGCGAGCAGAAGTATAAAAAGGAGATCGATGACTGGAAACGCAA
GATCAAAGTTTCCGAACAGCAAGTCACCGTCCTCGAGTGCAAGGTAGCTA
TGGCTCGAAACCAGAATAAATGTGAGACGTGTGAGAGGGTCTCCAAGTTT
TTCGCACCGGCTTCCGCCTCAGGGAAGGCCGGTGAGTCTTCTGGCAGCTC
AATTTCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010623KJC3_010623Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010623-T1KJC3_010623-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010623-T1.utr5p1KJC3_010623-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010623-T1.exon1KJC3_010623-T1.exon1Aspergillus niger KJC3exon
KJC3_010623-T1.exon2KJC3_010623-T1.exon2Aspergillus niger KJC3exon
KJC3_010623-T1.exon3KJC3_010623-T1.exon3Aspergillus niger KJC3exon
KJC3_010623-T1.exon4KJC3_010623-T1.exon4Aspergillus niger KJC3exon
KJC3_010623-T1.exon5KJC3_010623-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010623-T1.cdsKJC3_010623-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010623-T1.utr3p1KJC3_010623-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3893098..3894897 +
Powered by Drupal