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KJC3_010642-T1, KJC3_010642-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010642-T1
Unique NameKJC3_010642-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3953112..3954612-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010642-T1 ID=KJC3_010642-T1|Name=KJC3_010642-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1501bp|location=Sequence derived from alignment at ch7:3953112..3954612- (Aspergillus niger KJC3)
GAGCCTCGTTGTCAATTTATAGTCTCCTCCCCCTCGGCCACTGCCACAAC
TGCCATTGACAATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGT
CTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCT
CTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCA
AGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGAT
GGCCAGGTTGTTAACATGCATGTATGTGGGAACTCACTCCATCGTCTTTT
ATGGTGATTGCGGGAGGCACGCTGGTCGGGCCAGCTGTTGTGTTGTCCTC
CGGTGTTCGATTCTATCTTGAGCTTCTGTCGCTCGCGAAGGAAAAGGATG
TACTTGGGCTAACTAGCTTTCTCTTTTCTGAAATAGATCAAGGATGCGCT
GGGCAATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGG
CCTTCACTTCTCCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAG
CTTACCACTCGTCGTATGTTTATCTACCTTGATCATGTTGTATCTTGATA
TATCAGGGATATCAGGTGCTGTGTGATGTGCGTGTGTATGTGGTACTAAC
CAGACGCCAAATAGACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCG
ATGTCGACATTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAG
GAGAAGCTCAAGCCTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGT
GGCCGAGATTGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGC
TGCGTGATACCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTC
GGTACTATGGGTATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCT
GAGGGCTTACTTCAGGTATGTTCTTTTCTATCGCTCCTTCCGTTGGGTCT
GGTATCTGGGTAATGTGGCTAACAGCTTTGGATTTGTAGATCCAAGCACC
TTATCTAGACCATGTCGGTTTAAAACTAGAATCATGAGAAAGAGAAGGTT
CCAGGTTGATGCTTTCTCTCTTGTCATGACAAAATATGGACTATTTCTTT
TCAATGCATTTCATTATCGTCTTGACCCTATGTAGTTCCGGGATTTGCTT
CACGGTACACTGATTGAATATTGACGAGGAGTATGACAACTGTGCATGTA
CATTGGTGCTGGTGATCGGTATTGTTTCCTTTATTTTTAGCCATCTTTAA
CCACATAAGAGGAGACCTTTTTCCCAAGCTTGAAAGACCGTCAATCTGTA
TGTAGGTGCTGTAGTATGTCACGACCAAGGCATGCAAACATGCTAGCAAA
ATGACAGCTAGCGCGATCCTGTGTAACTCTAGATCGAAATCCCTAATAGT
CAATAGGAGACAATACCATGAGAACCAATTGCAGCCCGCACACTGTGCCA
C
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Coding sequence (CDS) from alignment at ch7:3953112..3954612-

>KJC3_010642-T1 ID=KJC3_010642-T1|Name=KJC3_010642-T1|organism=Aspergillus niger KJC3|type=CDS|length=2628bp|location=Sequence derived from alignment at ch7:3953112..3954612- (Aspergillus niger KJC3)
ATCCAAGCACCTTATCTAGACGCCGTTGCCAACCCCTACAAGTCCATCGA
GCTCGATGTCGACATTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGG
TTCAGGAGAAGCTCAAGCCTGTTGAGACCGACCTCCGCCGTATCGAAGAG
ATGGTGGCCGAGATTGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCA
GAAGCTGCGTGATACCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCG
CTTTCGGTACTATGGGTATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTG
TATCTGAGGGCTTACTTCAGATCAAGGATGCGCTGGGCAATGACCACGGT
CGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGC
CGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTTACCACTCGTCATG
GCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCTCCT
GTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCTGTGAGCG
GGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTTGTG
GTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGTTAA
CATGCATATCCAAGCACCTTATCTAGACGCCGTTGCCAACCCCTACAAGT
CCATCGAGCTCGATGTCGACATTGGTGCCGATGCCCGTGACTGGTCTAGC
ATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGACCTCCGCCGTAT
CGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGAGTACCTGCGCGCTC
GTGAGCAGAAGCTGCGTGATACCAACGAGAGCACGAACGAGCGTGTGAAG
TGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTGGGTGCTTGGCA
GGTCGTGTATCTGAGGGCTTACTTCAGATCAAGGATGCGCTGGGCAATGA
CCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTT
CTCCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTTACCACT
CGTCATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCT
TCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCTCTCTGCT
GTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCA
GCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGG
TTGTTAACATGCATATCCAAGCACCTTATCTAGACGCCGTTGCCAACCCC
TACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGATGCCCGTGACTG
GTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGACCTCC
GCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGAGTACCTG
CGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACGAACGAGCG
TGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTGGGTG
CTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCAAGGATGCGCTGG
GCAATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCC
TTCACTTCTCCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCT
TACCACTCGTCATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGT
CTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGTTCGACCT
CTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCA
AGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGAT
GGCCAGGTTGTTAACATGCATATCCAAGCACCTTATCTAGACGCCGTTGC
CAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGATGCCC
GTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACC
GACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGA
GTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACGA
ACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGA
TTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCAAGGAT
GCGCTGGGCAATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCG
TCAGGCCTTCACTTCTCCCGCCGATACTGCTTTCGACGTTTGCTTTGACA
ACCAGCTTACCACTCGTCATGGCGGCCACCCGTCTCACAATGAGGTCTTT
CCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCCCTGAAGT
TCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTC
GTTTTCAAGGACCAGCTTGTGGTCGTCACCGCCATTGTGAGCGGAAACAA
GGGTGATGGCCAGGTTGTTAACATGCAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERV25KJC3_010642Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010642-T1KJC3_010642-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010642-T1.cdsKJC3_010642-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010642-T1.utr3p1KJC3_010642-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010642-T1.exon4KJC3_010642-T1.exon4Aspergillus niger KJC3exon
KJC3_010642-T1.exon3KJC3_010642-T1.exon3Aspergillus niger KJC3exon
KJC3_010642-T1.exon2KJC3_010642-T1.exon2Aspergillus niger KJC3exon
KJC3_010642-T1.exon1KJC3_010642-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010642-T1.utr5p1KJC3_010642-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-25)
DBxrefInterPro:IPR009038
DBxrefPFAM:PF01105
Productvesicle coat component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3953112..3954612 -
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