You are here

Home

KJC3_010762-T1, KJC3_010762-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010762-T1
Unique NameKJC3_010762-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4282557..4284970+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010762-T1 ID=KJC3_010762-T1|Name=KJC3_010762-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2414bp|location=Sequence derived from alignment at ch7:4282557..4284970+ (Aspergillus niger KJC3)
CCATGACTTCAGGTGCTGCAACTACTACAATTCAACCTCACTGCCACCGT
TATTATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGA
CCGATAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAG
GCAATTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGA
ACTCGAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCT
ACGGTATCCTAAAGAAAAGGTATAACTACTCTCTGAATACTGTAATCATG
CAGGCGCTTACCGACCTCTTCTACTAGATATACCGACTTCCTTGTCAACG
AGATCGTACCGTCCGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCG
GAAGCAGAACAGGAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACC
CGCAGAAAATGATCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATG
CTGCGCCAAGTGCAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGAC
ATGACGCTCCTTGAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGT
ATCGCTGAACAAACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACC
TACCTAAGATTCCCACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAG
ATGCACCAGGCCATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAAC
CGACAGCGAAGGGATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACC
GTAGTGCGCAGGGCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAAC
TGGGATGAGCTGGGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAA
TAAGGATACTATGGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTA
ACACGAAGAACTTCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACT
GTTCAGAGGGCCTGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGAT
CAACCCTACGCTTCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAAC
ATGGCCTTGACCTGGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTC
CGTGAGTGCGATATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGT
TGCAAAGGCAAAGGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGC
GCGGTTACTTCAACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACC
CGTACAGACACGGTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGC
CTGCGATGCCATCCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGG
AGGGCGAGAACTCGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCA
GAAGCTATCCACATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGA
GAAGCTGCCTCGAAAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCA
GCCGTGCCCAGAACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAAC
CTGCGGTTGATGTATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGC
CGCCGGTGAGCGCTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATC
TCGTGCTGGTGCACGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCC
GCCGCGGGCGAGGTTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGC
GGGAGACAGCGCTTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGA
CTGCCGAGGAGGCAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTG
ACCCAGCCCGGCTACGATGTCCTTTACCCGCCCAACAAGATGACGGACTT
CTACAAACAATTCATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCG
ACATGCGTCGCAAGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAG
CTGCTCAACCGCCCGGGACCCGACTTCTCCTTCGACGTGCATGTGTATAC
TCAGGACGATGAGCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCA
AGAAGGCTGAGACTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCT
CAGGAGAAGCTCGCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTA
TGCCACCATGGCTCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACC
AGCCCGATTTCGGCAAGGGTCGGTAGACGATGGGTGTATATATAGTACAA
GCTACATTTTTGTATATACTGGGTATAGATTGACTTGCAACATGATTGAA
CGCTACGTGATAAA
back to top

Coding sequence (CDS) from alignment at ch7:4282557..4284970+

>KJC3_010762-T1 ID=KJC3_010762-T1|Name=KJC3_010762-T1|organism=Aspergillus niger KJC3|type=CDS|length=4428bp|location=Sequence derived from alignment at ch7:4282557..4284970+ (Aspergillus niger KJC3)
ATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGA
TAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAA
TTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTC
GAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGG
TATCCTAAAGAAAAGATATACCGACTTCCTTGTCAACGAGATCGTACCGT
CCGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAGCAGAACAG
GAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCAGAAAATGA
TCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTG
CAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGACGCTCCTT
GAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCGCTGAACAA
ACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACCTAAGATTC
CCACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGCACCAGGCC
ATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGACAGCGAAGG
GATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGG
GCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTG
GGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAGGATACTAT
GGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACACGAAGAACT
TCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCC
TGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGATCAACCCTACGCT
TCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGGCCTTGACC
TGGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTGAGTGCGAT
ATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAA
GGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGGTTACTTCA
ACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTACAGACACG
GTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCAT
CCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACT
CGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAGCTATCCAC
ATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCG
AAAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGA
ACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATG
TATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCG
CTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGC
ACGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAG
GTTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGAGACAGCGC
TTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGG
CAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGC
TACGATGTCCTTTACCCGCCCAACAAGATGACGGACTTCTACAAACAATT
CATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCA
AGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGC
CCGGGACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAGGACGATGA
GCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGA
CTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTC
GCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGC
TCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCG
GCAAGGGTCGGTAGATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAG
CGGCTCAAGACCGATAACAACTCCGTTACCGATGATGCTGCGCTTCCTTC
CTCCAACGAGGCAATTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGG
AGGCGAGAGAACTCGAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAAT
GAAGGGTTCTACGGTATCCTAAAGAAAAGATATACCGACTTCCTTGTCAA
CGAGATCGTACCGTCCGGCGAAGTCCTGCATCTTCACAACATCCCCACCC
CGGAAGCAGAACAGGAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAA
CCCGCAGAAAATGATCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGA
TGCTGCGCCAAGTGCAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAG
ACATGACGCTCCTTGAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATT
GTATCGCTGAACAAACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGA
CCTACCTAAGATTCCCACTCTTCTTGTCGATGACCGCGACCTGCGCATCA
AGATGCACCAGGCCATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAA
ACCGACAGCGAAGGGATGATGGTTATTTCTGCTGCGCCAAACCGGAACAA
CCGTAGTGCGCAGGGCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCA
ACTGGGATGAGCTGGGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAG
AATAAGGATACTATGGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGAT
TAACACGAAGAACTTCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTA
CTGTTCAGAGGGCCTGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAG
ATCAACCCTACGCTTCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAA
ACATGGCCTTGACCTGGGAGATCTGAATGGCAACGAATTCGTTATCAGTC
TCCGTGAGTGCGATATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCT
GTTGCAAAGGCAAAGGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGA
GCGCGGTTACTTCAACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTA
CCCGTACAGACACGGTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGC
GCCTGCGATGCCATCCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCA
GGAGGGCGAGAACTCGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCG
CAGAAGCTATCCACATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTT
GAGAAGCTGCCTCGAAAATTCGCGGCAGAATCCACCGTCATGCGTCAACT
CAGCCGTGCCCAGAACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTA
ACCTGCGGTTGATGTATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTT
GCCGCCGGTGAGCGCTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGA
TCTCGTGCTGGTGCACGAGCACAGCGACAAGGATGACACGGCAGCTGCCG
CCGCCGCGGGCGAGGTTGACGCCGATGGCGAAGTCATCATCACCCCGCAG
GCGGGAGACAGCGCTTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTT
GACTGCCGAGGAGGCAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTC
TGACCCAGCCCGGCTACGATGTCCTTTACCCGCCCAACAAGATGACGGAC
TTCTACAAACAATTCATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTT
CGACATGCGTCGCAAGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCA
AGCTGCTCAACCGCCCGGGACCCGACTTCTCCTTCGACGTGCATGTGTAT
ACTCAGGACGATGAGCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGG
CAAGAAGGCTGAGACTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACG
CTCAGGAGAAGCTCGCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAG
TATGCCACCATGGCTCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTA
CCAGCCCGATTTCGGCAAGGGTCGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010762KJC3_010762Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010762-T1.utr5p1KJC3_010762-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010762-T1.exon1KJC3_010762-T1.exon1Aspergillus niger KJC3exon
KJC3_010762-T1.exon2KJC3_010762-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010762-T1.cdsKJC3_010762-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010762-T1.utr3p1KJC3_010762-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010762-T1KJC3_010762-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261EY9
DBxrefInterPro:IPR020103
DBxrefInterPro:IPR011760
DBxrefInterPro:IPR042214
DBxrefInterPro:IPR001656
DBxrefPFAM:PF01142
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4282557..4284970 +
Powered by Drupal