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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4342527..4345647+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010775-T2 ID=KJC3_010775-T2|Name=KJC3_010775-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3121bp|location=Sequence derived from alignment at ch7:4342527..4345647+ (Aspergillus niger KJC3)
CGATAGACTCACCAGAATGGGATTTAACATTTAACCTCCCACGGACTCCC
CAGAATCTCCCCTGTGAACACCCCGCCAGGAAAAGCTTCAGCCTTGGAAA
CATCCCCATCCCAGCGCAATATTAGACAGATTTACGCTTTCCATCTAATA
ATCCTAAGACATCCTTCCTTCCTACTTGCGTCCTCCACCCAATTGTATCC
AGATCCCCTTGCTGGACCAGCCTGCCTTTCCTATAACTACATCCCTCCGC
TGCAACTGAGACATCCTTTCTCTTTCTTTCATTGATTCAGACTGCTCCGC
CTTGGGAAAGACAGGAACCAAGCAAAACCGCGTCGCAGGGCGGCTTATCG
ATTGTCCCCAATTATCGCCATCGCCTTGATCTCGAACCGCACACGCCCTC
CTCCCCCCCTCCCCTTCTCTCGAACTATCCTACAACGAACCACAAGGCAC
CGCGTCTTGTCTTTTAATCCAGAGACAGTCGCGCCTCCTAGGAAACGCTT
TTCTTGAGGCCCCAGTCCAACCAGAACTCTCCATCCCGGACAATTGCCCC
CCCTCTCCGTTTCTTCGCCCAACGGGGATTCGCCGCGGTTACTCTAGGAA
CTCTATAGTCTACATTCCTGGCCTTGCGTACTAGACCATCAAAGGAACGC
GACGCGCCTCTCTCTTTCTGCTTGACTCGGTCCTTTGCTCGCCTCTCTCC
TTTGGGGAACTACTAGGTAATGGCTTCTGGCTGTAAGTGTGATCGACCCT
TTCCTGCCTTCCCTGATATATGGCCGGGAGATTTGTTTATTTCACCTCGT
CCGTCCCTCCTCCATTCCCCAACCTCGACTTCCACTTCACACTCCCATCC
TTCCCTCACTCTTTTTTTCTTTGGCTTGCTTCCCCTCTGCAGAGGCGACT
TTCCCTTCATTCTTTCTCTGTCTTGTATGCTACATCACCGTCTGTCGTTC
GCATTCTTACCTTCACTGTCCCTCAGTGCCTCTCTCTTGTCATCACTGGT
CCCTCGCTGCACCCGCATTGCTCCACCGTCTCTCACTTGTATATCGCCGC
CGTTGCGCCTTGCCACATTCCCTCATATACTAATAATACACTGCACCCTC
CTTGTGTCATACATCATTTCGTGCACCCGCATACCACCTTCCAAACTTTC
TTTAAGCTCATCCCCCTTCAGAAGACCGAAGTCGTTGCACCTGCACAGCA
CCCCTACATATTGCATTCAATACTACCCACAGACACTAAACTATACCCTG
CACAGGTGGAAGAGTCGAAGTACCTCCCGCACCGTCTCGAAAGGATCATC
TCATTGAAGAAACCGAAGACATGAGATCCCAGGGTAACATGTCCGATCGC
CTGACCATCGAAGTCGACTGTACCTCCTTGGGTTCCAACGAGTGCCCCTC
CATGGCTTCCAGCTTCTCACCCATGGAATCACCTACGCCTACTCCAACAA
GTGTGTACAGCCAAGGCTCTTTGGCTTCGCCCACCTGGCACGAAGGGGGC
TCGTATCCGGGACAAGGCTATGAAAGGCATACCGGAACGACGCCAATGCG
CAGTGCCTTTCGACTGGCCAGCATGACATCCAACGATAGTATGGGCATGT
CCTATGGGCAAATGGAGGCACAAGAGCGGATGCCAATGACCGACTTTCTC
TCAGGATATGATGAGAACGTTGAACATTTCTGGATCCCCCAAGAGGCACA
GAAAGCCTATGAACATGGCGTCCCTGGACTCCCATACCCTCAGGCAATGC
CTCAGTATTCCACTATGGGCCGTAGCAGCTATCGACAACACGCTGCACCC
TACCTGCCCGATTCCGCAACCAACCCCTGTCTGTCGCGGTCGATTTTCCA
TCAGCCTGAAAGGGTTCCCAACTCAATGTCTATGGGCAATGTGATACCTT
GGATGGCCCCGCAGCCAGACTCAATTGCCCCGCAAACTATTGCCCCGTCG
CAGGTTGCCCCAGTCACCCCCCCGCCGTCATACTCGGAATTTTCAGGCTC
AATCAATACCTTCAAGACGCACAGCCCGACCACTCCAGTGCGTTCCTGCT
CATTGGGGACTACCTCTGGGACCGATACACCCATGAGCCGCCTCTCAGGC
GGCATGGACTACCTGGATGACTTCAACCAATCGCCAGTTTATCGCGACAA
TCTCGCCCGAGTCCAGCGCCAGCCCTCCAGGAAAGTTGCTCGGAAGCAGT
CGTCAAAGCAGAGCCTGAGCTTGGAAAACCTTCCGTCCATCATCAAGCAA
GTCCAATTTAAGTGCAAGGAGCCTGGTTGCAAGGGTCGCTTCAAGAGACA
AGAGCATCTGAAGCGGCACATGAAGAGCCACTCTAAGGAAAAGCCGCATG
TATGCTGGGTTCCTGGCTGCGAACGGGCTTTCTCGCGCAGTGACAACCTG
AACGCGCATTACACGAAGACCCACAGCAAGCGCGGCGGCCGTAATCGCTA
TGTCGCGACGCTAGACGAGAACAGCCCAGACTACAACCCCGAATACCGCG
GCCAATTAACCGCTGATGGGCGACCAGTCTACAACTCCAAGTCCCAAGAT
CTCATGCCCGATGCTCGTGAGACGAGCGAGGAGGCGTGGTTGGAGTAAGC
GGATATAGAGTTTAATACGGGAAGGACCGAAACATGATACCCTTGGGCAC
CTGAGTTGCCCGTTCCCTTTTGGGTCATTAGATGGGCACAGACACAGGGC
CCGACAGACCCCGGTCGGCGCTTCACGGCGTTCTTTGTAAAACATTTTCT
GGCTATATACACCGGACGATTTCCTTTGTTAATTTGAATGTTGCATACCT
TTCCTTTGTGTTTTCCTTCATGATCTTATATTCTCCCCACCCATCTGGGC
CCAAAATCTCTTATGCTTTGGAGAGGCACTTCTCATTCCATTTCTTTCTC
TTTCTTCTTTCATTTTTTTTTCTTCTTTCAAAAAGAAAACCTACCATTGG
ATAATAATGCGTTGAGACGGATTGGCTAAAACGGCATGGAAAGGAATGGT
TTGTACACGATGGGAGTGATCTGACTGCGTTCTTTTCAATCTGATTGGTC
TCATCCACTACTGAACACTATACGAGATACCTAACAAGTAATAAGAATTC
AAAACAATTGCATGACTTGAA back to topCoding sequence (CDS) from alignment at ch7:4342527..4345647+ >KJC3_010775-T2 ID=KJC3_010775-T2|Name=KJC3_010775-T2|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch7:4342527..4345647+ (Aspergillus niger KJC3)
ATGAGATCCCAGGGTAACATGTCCGATCGCCTGACCATCGAAGTCGACTG
TACCTCCTTGGGTTCCAACGAGTGCCCCTCCATGGCTTCCAGCTTCTCAC
CCATGGAATCACCTACGCCTACTCCAACAAGTGTGTACAGCCAAGGCTCT
TTGGCTTCGCCCACCTGGCACGAAGGGGGCTCGTATCCGGGACAAGGCTA
TGAAAGGCATACCGGAACGACGCCAATGCGCAGTGCCTTTCGACTGGCCA
GCATGACATCCAACGATAGTATGGGCATGTCCTATGGGCAAATGGAGGCA
CAAGAGCGGATGCCAATGACCGACTTTCTCTCAGGATATGATGAGAACGT
TGAACATTTCTGGATCCCCCAAGAGGCACAGAAAGCCTATGAACATGGCG
TCCCTGGACTCCCATACCCTCAGGCAATGCCTCAGTATTCCACTATGGGC
CGTAGCAGCTATCGACAACACGCTGCACCCTACCTGCCCGATTCCGCAAC
CAACCCCTGTCTGTCGCGGTCGATTTTCCATCAGCCTGAAAGGGTTCCCA
ACTCAATGTCTATGGGCAATGTGATACCTTGGATGGCCCCGCAGCCAGAC
TCAATTGCCCCGCAAACTATTGCCCCGTCGCAGGTTGCCCCAGTCACCCC
CCCGCCGTCATACTCGGAATTTTCAGGCTCAATCAATACCTTCAAGACGC
ACAGCCCGACCACTCCAGTGCGTTCCTGCTCATTGGGGACTACCTCTGGG
ACCGATACACCCATGAGCCGCCTCTCAGGCGGCATGGACTACCTGGATGA
CTTCAACCAATCGCCAGTTTATCGCGACAATCTCGCCCGAGTCCAGCGCC
AGCCCTCCAGGAAAGTTGCTCGGAAGCAGTCGTCAAAGCAGAGCCTGAGC
TTGGAAAACCTTCCGTCCATCATCAAGCAAGTCCAATTTAAGTGCAAGGA
GCCTGGTTGCAAGGGTCGCTTCAAGAGACAAGAGCATCTGAAGCGGCACA
TGAAGAGCCACTCTAAGGAAAAGCCGCATGTATGCTGGGTTCCTGGCTGC
GAACGGGCTTTCTCGCGCAGTGACAACCTGAACGCGCATTACACGAAGAC
CCACAGCAAGCGCGGCGGCCGTAATCGCTATGTCGCGACGCTAGACGAGA
ACAGCCCAGACTACAACCCCGAATACCGCGGCCAATTAACCGCTGATGGG
CGACCAGTCTACAACTCCAAGTCCCAAGATCTCATGCCCGATGCTCGTGA
GACGAGCGAGGAGGCGTGGTTGGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010775-T2.utr3p1 | KJC3_010775-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4342527..4345647 + |
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