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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4891943..4893527+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010988-T1 ID=KJC3_010988-T1|Name=KJC3_010988-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1585bp|location=Sequence derived from alignment at ch7:4891943..4893527+ (Aspergillus niger KJC3)
CCTGAACTGCCCAACCGCTGCTCTGTTCTGGCACTGTTCATGCCAGTATA
TTAGCTAGGAGTACTTCTTTGATAAACATTGTCCGCCTTACGCCTGATCG
ATCCTTCAGGTTTCTCAACTCCTCTTGCGTGTTACCTCGCACCTTTGTTT
ATCTTTGCAAAACAAACCCCACAACCACTGCTGGATATCCAGCCAGACTT
GCATTTTGAAGCATCTGCCGGAAGTTTATTGAACTACAACATTAGACAAT
ATGACGCTTTACTACAGCCTCGTACGTACCGCCATTTGTTGTTGACTCTC
CTCGCAATGGCATGGAGTTCGGGATTGTTGCAGCCTGCCGCCTGCAGCCC
CTGACCCGCGCACTCCCGGATCATCAGATAATATGTCGCATCAGCATGTG
CTTACAATATGGTAATAGGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGT
CTTCATGGGCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAGCTCT
TCGCTTTCATTTCGGAAAGTCCGATAGTAGCTAAATTACAATATGGATTA
AAGGTATGCTATTAAACATTGTCTAACATTTGCAATCACTCATCAAGCTA
TAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCG
CGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAGGCA
CCATGGGGTATGCTTCCGACGATCCAGGCCCTTTTTAGCATTGCACTGAA
ACAGTTACTGACCTAGCTTTCGCCACAGAGCCGCCGCTCTCGGTACCGAT
CGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCT
CTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCA
TGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGT
GACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGA
AATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTG
ACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCAC
AAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGA
CCAGTAGACGTCTCTTGGGTGTGCCGCGAGAAATACAATCGTGAGCTTGT
TAGGCCAGTCGGGACTGTGAATTGATCGCTCTTTGGGGCTGATTGATTGT
ACATCACGCCGTCTGCAAGCTACTCTCTTATGTGCATTTCGGTTACCATA
TCTATCGGGTCTGGATGAGGCGGAATGTTGACAACGACCGCCTGTTGGTC
GGATGAACCAGCTGTTATCTTGAAGCGCATTGGTGGAGTGGATCGTACTG
GTGCAGTTTTCGGGAAAGAAGTTGTCATTGCAAAACTTAGGATTATCTGG
GTCATCTGGGTTATCACTTACAATGGAGCAAAAATACCATCGTCTAAATC
AAAATGTAGGCATTCGGTAAACACAAGAGCGATACATCCACAGATACAAA
CATACGCCATTGCCAACATTTGAAAAATACAGTAG back to topCoding sequence (CDS) from alignment at ch7:4891943..4893527+ >KJC3_010988-T1 ID=KJC3_010988-T1|Name=KJC3_010988-T1|organism=Aspergillus niger KJC3|type=CDS|length=2556bp|location=Sequence derived from alignment at ch7:4891943..4893527+ (Aspergillus niger KJC3)
ATGACGCTTTACTACAGCCTCGTTTTCTGCCTCTTGGTGTTTGAGATGGC
GGTCTTCATGGGCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAGC
TCTTCGCTTTCATTTCGGAAAGTCCGATAGTAGCTAAATTACAATATGGA
TTAAAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAA
CCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAG
GCACCATGGGAGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCC
CGGAAGTTCTACTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTT
CCTGTCTCTTATCCTCAATCGCACTTACACCATGATCCTTGACGTCCTCC
GTCTTGAGGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGT
AAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCG
TCTGAAGGAGGAGCTTGCAGCCAAGGACCGTGACATTGAGACCCTGAAGA
AGCAGTGTGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTG
TCTGGTGAGAAGGATGAGGCTCCCAAGAAGGACCAGTAGATGACGCTTTA
CTACAGCCTCGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGG
GCCTCATCATCCCTCTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTC
ATTTCGGAAAGTCCGATAGTAGCTAAATTACAATATGGATTAAAGATCAC
ATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATACC
GTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGA
GCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCTA
CTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTA
TCCTCAATCGCACTTACACCATGATCCTTGACGTCCTCCGTCTTGAGGAC
AGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCGC
TCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGG
AGCTTGCAGCCAAGGACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAG
GGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGAA
GGATGAGGCTCCCAAGAAGGACCAGTAGATGACGCTTTACTACAGCCTCG
TTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATC
CCTCTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGGAAAG
TCCGATAGTAGCTAAATTACAATATGGATTAAAGATCACATTCATCTTTA
TCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTG
GAGCTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGAGCCGCCGCTCT
CGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCA
ACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGC
ACTTACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACT
CCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGC
AGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCC
AAGGACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCG
CGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTC
CCAAGAAGGACCAGTAGATGACGCTTTACTACAGCCTCGTTTTCTGCCTC
TTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCTCTTCCATT
CACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGGAAAGTCCGATAGTAG
CTAAATTACAATATGGATTAAAGATCACATTCATCTTTATCCTCATCCTC
TTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTC
CTTCGGCAAAGAGGGAGGCACCATGGGAGCCGCCGCTCTCGGTACCGATC
GCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCTC
TGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCAT
GATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGTG
ACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAA
ATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTGA
CATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCACA
AGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGAC
CAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010988-T1.utr5p1 | KJC3_010988-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010988-T1.utr3p1 | KJC3_010988-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264XKX |
| DBxref | InterPro:IPR041672 |
| DBxref | InterPro:IPR040463 |
| DBxref | PFAM:PF18035 |
| DBxref | PFAM:PF05529 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4891943..4893527 + |
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