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KJC3_011039-T1, KJC3_011039-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011039-T1
Unique NameKJC3_011039-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:5069561..5070897+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011039-T1 ID=KJC3_011039-T1|Name=KJC3_011039-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1337bp|location=Sequence derived from alignment at ch7:5069561..5070897+ (Aspergillus niger KJC3)
CCCTCCGATCAGACTTGCGACGTGGAGACCTGTATGCGTGAACAATAAAA
AGCTTCATCGAAGATCCTCTTCTTTTCTTTTTCCCTTCCTTCATTTCCTT
TTGTTGTGAACTTTCATCTCAAAAGCAATGAATACCATATCATGTCTTGC
GTTGTCGATTTTTCTTCTTTCTATCATCTTCACCAGATATCGAAAGAACC
TGCCATCCTTATGGCGCACAAAACATGCCGAACCGGGTTGCAATGATCTT
AAGAAAATGGCTCCTTACCCGGCCCAACCCATCAAGGGCAGGGAGAGATA
CCGAGTCATGATGGACGTCCGGAGATTGGACGTGGAAAACTGGCTCACCG
TTGATAAGAACTATATGGACGAGCACGAGGTTAGAAGCCAATTGCTGGAG
AAAGAGAAGAGCAAGGTCCTCCAATGCCTCCCTGAGTCATATGACGCATG
TATAGAGGCATTGGAAGAGGTAGTTGAATTCCTCTGCCAGCGATTCTGCA
ATGTTTTCGAACAAAAAAAGTGCGGTGACGAGACGACTGTGCACAACAAA
ATGACTGGAGAGACATTTTCCTTTGGAGGAAAGAACAAAGATGTCGATCC
ACTTGAGATAGCCGTCAGACTGACAATGGAGGATTTGAGTATTCTGATGA
AAAACGAGGAGGACGAGTACTATCTGTTAGTCTTATGATCCTACTCTCAC
CTCCAAATCGACCGACTGACCGATATGAACAGGGCCGCCAGCGCAAGCCT
TTTCCCCGTTGGCTGGACAGTTCAAGACCGCATTGGGTGGACCATCTCTA
AGCTTCACAACCCAGTACCACTGTGGCATCAGCAGGTTGCCAATTCTGTC
AGCAAGTAAGTACTCCGGCTGCTTGGGTTGGCAGTGAAGGCGAACAGCAG
AAGCAAGGAGAGAGACTAACATTCTTACTCTAGATTCTTGGCTCGGCTCA
CGCCGGCATCACCCATGGAGAGATCCAACTACTTCGTCGAAGTGAAGCGG
CCCGATGAAGATCTATTTGAGATCCTCTATCGTCCCACTTCTTTATCTGA
GGAGAACCCGGATCCAACGCCACAGGATATTGTTATTCGTCGTGAGCGAC
AAACTTTCCGTCGACTTCCTCGTACCGGAGCACTCGTCTTTGGTGTCAAG
ACCATTTTGACAACTCTGGATGAGCTGCCAATGCAGGAATTGCAAAACCT
TGCCAAGGAGATCAAGAGCTGGCCAGAATATGTTGGTGAATACAAAGGAA
GAGAGGTCTGGGGCCCCAAGGCTCTAGAGTATTGTGAGAAGAAAAGCCAA
CTGTATCAAGAAGACCCTGAAAAGATGGTGATGTAAT
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Coding sequence (CDS) from alignment at ch7:5069561..5070897+

>KJC3_011039-T1 ID=KJC3_011039-T1|Name=KJC3_011039-T1|organism=Aspergillus niger KJC3|type=CDS|length=3222bp|location=Sequence derived from alignment at ch7:5069561..5070897+ (Aspergillus niger KJC3)
ATGAATACCATATCATGTCTTGCGTTGTCGATTTTTCTTCTTTCTATCAT
CTTCACCAGATATCGAAAGAACCTGCCATCCTTATGGCGCACAAAACATG
CCGAACCGGGTTGCAATGATCTTAAGAAAATGGCTCCTTACCCGGCCCAA
CCCATCAAGGGCAGGGAGAGATACCGAGTCATGATGGACGTCCGGAGATT
GGACGTGGAAAACTGGCTCACCGTTGATAAGAACTATATGGACGAGCACG
AGGTTAGAAGCCAATTGCTGGAGAAAGAGAAGAGCAAGGTCCTCCAATGC
CTCCCTGAGTCATATGACGCATGTATAGAGGCATTGGAAGAGGTAGTTGA
ATTCCTCTGCCAGCGATTCTGCAATGTTTTCGAACAAAAAAAGTGCGGTG
ACGAGACGACTGTGCACAACAAAATGACTGGAGAGACATTTTCCTTTGGA
GGAAAGAACAAAGATGTCGATCCACTTGAGATAGCCGTCAGACTGACAAT
GGAGGATTTGAGTATTCTGATGAAAAACGAGGAGGACGAGTACTATCTGG
CCGCCAGCGCAAGCCTTTTCCCCGTTGGCTGGACAGTTCAAGACCGCATT
GGGTGGACCATCTCTAAGCTTCACAACCCAGTACCACTGTGGCATCAGCA
GGTTGCCAATTCTGTCAGCAAATTCTTGGCTCGGCTCACGCCGGCATCAC
CCATGGAGAGATCCAACTACTTCGTCGAAGTGAAGCGGCCCGATGAAGAT
CTATTTGAGATCCTCTATCGTCCCACTTCTTTATCTGAGGAGAACCCGGA
TCCAACGCCACAGGATATTGTTATTCGTCGTGAGCGACAAACTTTCCGTC
GACTTCCTCGTACCGGAGCACTCGTCTTTGGTGTCAAGACCATTTTGACA
ACTCTGGATGAGCTGCCAATGCAGGAATTGCAAAACCTTGCCAAGGAGAT
CAAGAGCTGGCCAGAATATGTTGGTGAATACAAAGGAAGAGAGGTCTGGG
GCCCCAAGGCTCTAGAGTATTGTGAGAAGAAAAGCCAACTGTATCAAGAA
GACCCTGAAAAGATGGTGATGTAAATGAATACCATATCATGTCTTGCGTT
GTCGATTTTTCTTCTTTCTATCATCTTCACCAGATATCGAAAGAACCTGC
CATCCTTATGGCGCACAAAACATGCCGAACCGGGTTGCAATGATCTTAAG
AAAATGGCTCCTTACCCGGCCCAACCCATCAAGGGCAGGGAGAGATACCG
AGTCATGATGGACGTCCGGAGATTGGACGTGGAAAACTGGCTCACCGTTG
ATAAGAACTATATGGACGAGCACGAGGTTAGAAGCCAATTGCTGGAGAAA
GAGAAGAGCAAGGTCCTCCAATGCCTCCCTGAGTCATATGACGCATGTAT
AGAGGCATTGGAAGAGGTAGTTGAATTCCTCTGCCAGCGATTCTGCAATG
TTTTCGAACAAAAAAAGTGCGGTGACGAGACGACTGTGCACAACAAAATG
ACTGGAGAGACATTTTCCTTTGGAGGAAAGAACAAAGATGTCGATCCACT
TGAGATAGCCGTCAGACTGACAATGGAGGATTTGAGTATTCTGATGAAAA
ACGAGGAGGACGAGTACTATCTGGCCGCCAGCGCAAGCCTTTTCCCCGTT
GGCTGGACAGTTCAAGACCGCATTGGGTGGACCATCTCTAAGCTTCACAA
CCCAGTACCACTGTGGCATCAGCAGGTTGCCAATTCTGTCAGCAAATTCT
TGGCTCGGCTCACGCCGGCATCACCCATGGAGAGATCCAACTACTTCGTC
GAAGTGAAGCGGCCCGATGAAGATCTATTTGAGATCCTCTATCGTCCCAC
TTCTTTATCTGAGGAGAACCCGGATCCAACGCCACAGGATATTGTTATTC
GTCGTGAGCGACAAACTTTCCGTCGACTTCCTCGTACCGGAGCACTCGTC
TTTGGTGTCAAGACCATTTTGACAACTCTGGATGAGCTGCCAATGCAGGA
ATTGCAAAACCTTGCCAAGGAGATCAAGAGCTGGCCAGAATATGTTGGTG
AATACAAAGGAAGAGAGGTCTGGGGCCCCAAGGCTCTAGAGTATTGTGAG
AAGAAAAGCCAACTGTATCAAGAAGACCCTGAAAAGATGGTGATGTAAAT
GAATACCATATCATGTCTTGCGTTGTCGATTTTTCTTCTTTCTATCATCT
TCACCAGATATCGAAAGAACCTGCCATCCTTATGGCGCACAAAACATGCC
GAACCGGGTTGCAATGATCTTAAGAAAATGGCTCCTTACCCGGCCCAACC
CATCAAGGGCAGGGAGAGATACCGAGTCATGATGGACGTCCGGAGATTGG
ACGTGGAAAACTGGCTCACCGTTGATAAGAACTATATGGACGAGCACGAG
GTTAGAAGCCAATTGCTGGAGAAAGAGAAGAGCAAGGTCCTCCAATGCCT
CCCTGAGTCATATGACGCATGTATAGAGGCATTGGAAGAGGTAGTTGAAT
TCCTCTGCCAGCGATTCTGCAATGTTTTCGAACAAAAAAAGTGCGGTGAC
GAGACGACTGTGCACAACAAAATGACTGGAGAGACATTTTCCTTTGGAGG
AAAGAACAAAGATGTCGATCCACTTGAGATAGCCGTCAGACTGACAATGG
AGGATTTGAGTATTCTGATGAAAAACGAGGAGGACGAGTACTATCTGGCC
GCCAGCGCAAGCCTTTTCCCCGTTGGCTGGACAGTTCAAGACCGCATTGG
GTGGACCATCTCTAAGCTTCACAACCCAGTACCACTGTGGCATCAGCAGG
TTGCCAATTCTGTCAGCAAATTCTTGGCTCGGCTCACGCCGGCATCACCC
ATGGAGAGATCCAACTACTTCGTCGAAGTGAAGCGGCCCGATGAAGATCT
ATTTGAGATCCTCTATCGTCCCACTTCTTTATCTGAGGAGAACCCGGATC
CAACGCCACAGGATATTGTTATTCGTCGTGAGCGACAAACTTTCCGTCGA
CTTCCTCGTACCGGAGCACTCGTCTTTGGTGTCAAGACCATTTTGACAAC
TCTGGATGAGCTGCCAATGCAGGAATTGCAAAACCTTGCCAAGGAGATCA
AGAGCTGGCCAGAATATGTTGGTGAATACAAAGGAAGAGAGGTCTGGGGC
CCCAAGGCTCTAGAGTATTGTGAGAAGAAAAGCCAACTGTATCAAGAAGA
CCCTGAAAAGATGGTGATGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011039KJC3_011039Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011039-T1.utr5p1KJC3_011039-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011039-T1.exon1KJC3_011039-T1.exon1Aspergillus niger KJC3exon
KJC3_011039-T1.exon2KJC3_011039-T1.exon2Aspergillus niger KJC3exon
KJC3_011039-T1.exon3KJC3_011039-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011039-T1.cdsKJC3_011039-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011039-T1KJC3_011039-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR021848
DBxrefPFAM:PF11927
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:5069561..5070897 +
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