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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5289585..5291219- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011118-T1 ID=KJC3_011118-T1|Name=KJC3_011118-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1635bp|location=Sequence derived from alignment at ch7:5289585..5291219- (Aspergillus niger KJC3)
GCTCGTGGAACTCGGCAACAACGGCGGGGTACTACACCCCATCACTTCGC
TTAGTGACAATATTAATCCAAGTTCAGTAACGTTACGCATCTATCGTGTG
TGCCTCCTCCATTATTATTAGACTTGCAGCGATCATGTCGCACTCCGATC
ATCAACCCACTTTCCCTGGCCCACCAGTGATTGTGGCAGACGAAATTCCG
ACGGAAACACCAATTGACGCCGTGGTTTTATCAGGTACGTAGTTGTATAT
CTACTTTGCTACACACTAGGATCTACTCATGGCAAGAAATAACAGAAATC
GGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGCCTTGGTTCTTCAGCCTG
GGCTCAAAGATATCGGATTGATGTCGAGGACCAAGATCAGACAGAAAGCT
ATTTCTTGAAGGTAAACTTTCCCTATGGCATCTTTTTCACTTTAAATGAC
ACTACTACGCTTACTGCTCTACTAACCAGGCCCAAAATAGATATCATTAG
GGGTCCATGGCAAGGAAGCCCTCAGAGGGGAATTCGAATCTACTTTAGCA
ATCCACAGCATAATTGGAAGCTTCACTCCTAAGCCAAATGGATGGGGATC
TTTCAAGGCACTTCCAGGCGTACATTATTATTTCTGTCGATTCTATGAAC
TTGCAGAGCATGCCCCCAAGCCAGCTGAGTTTTGCCAGATGGTCGCCTTT
CTCCATTCGAGGAGCGAATCGCCAAACGGAAAATTCGGGTTTCACCTTGT
GACATACAACGGCGATCTGCCCCAGGAGAATGGATACACTGACACATGGG
AGGAATTCTTCAGAATTGGCTTTGAGCACATGATCGATATGAACATCGAG
CGTGGTGGGGTATGGGCTGAGCTGGAAGGCTTATATACTGCTATGATTGT
CAAAGTCATTCCCCGCTTGTTAAGGCCAATGGAGACGGGAAGGCGGTCCA
TCAAGCCAGCCCTCGTCCACGGAGACCTGTGGTGCGGAAATGCCGCTATC
AATTCGGCCACCGGAAGGCCGTTGATATATGATCCTGCCAGCTTCTATGC
GCACAATGAGTGTATGCGCTTCTCTGCAAACCCAGATGAATTGCACTGAT
ATTACCCTCTAGATGAATTGGGCAATTGGCGTCCTGAGAGAAATGGGTTT
ACGAGGAGTTACTTTGATGCCTATCATTCAATCATCCCAAAGACTGCCCC
AACAGAAGACTATGATGACCGGATTGCACTATATTCAATGTAAGAGCCCA
TCCAGTTCTACTACTCTATGATAGCTCTTATGAGGAACAGGCGCTTCAAT
TTACAGGCCGCGGCCCTCTTTCCCAAGGTTACTAGCTTTCGAGACTCGTA
AGTCGATTATCATGTGCATTGGCCCTCTTCGTTGCTAATAGTACATCAGT
GTCATCGAAGAAATGAGACGTCTGGTTACGAAGTACCCGGGAGGCTATGA
GGAGTACGCCAGGACGTCTTGTATCAATATATAACGTCTCTGAGGCGGAT
TATCATACGTTGACTGCCAAGCATCTACATCTTTCCTAAGAGCAGTTGAC
TATTTTATAAATTTTTGTCGCGACAGCTCTCTATTGTACTTATTCTCATT
TCTCTGGGATTATTGTAAATTCTCGAGACAGTGCA back to topCoding sequence (CDS) from alignment at ch7:5289585..5291219- >KJC3_011118-T1 ID=KJC3_011118-T1|Name=KJC3_011118-T1|organism=Aspergillus niger KJC3|type=CDS|length=6336bp|location=Sequence derived from alignment at ch7:5289585..5291219- (Aspergillus niger KJC3)
TGTCATCGAAGAAATGAGACGTCTGGTTACGAAGTACCCGGGAGGCTATG
AGGAGTACGCCAGGACGTCTTGTATCAATATATAAGCGCTTCAATTTACA
GGCCGCGGCCCTCTTTCCCAAGGTTACTAGCTTTCGAGACTCATGAATTG
GGCAATTGGCGTCCTGAGAGAAATGGGTTTACGAGGAGTTACTTTGATGC
CTATCATTCAATCATCCCAAAGACTGCCCCAACAGAAGACTATGATGACC
GGATTGCACTATATTCAATATATCATTAGGGGTCCATGGCAAGGAAGCCC
TCAGAGGGGAATTCGAATCTACTTTAGCAATCCACAGCATAATTGGAAGC
TTCACTCCTAAGCCAAATGGATGGGGATCTTTCAAGGCACTTCCAGGCGT
ACATTATTATTTCTGTCGATTCTATGAACTTGCAGAGCATGCCCCCAAGC
CAGCTGAGTTTTGCCAGATGGTCGCCTTTCTCCATTCGAGGAGCGAATCG
CCAAACGGAAAATTCGGGTTTCACCTTGTGACATACAACGGCGATCTGCC
CCAGGAGAATGGATACACTGACACATGGGAGGAATTCTTCAGAATTGGCT
TTGAGCACATGATCGATATGAACATCGAGCGTGGTGGGGTATGGGCTGAG
CTGGAAGGCTTATATACTGCTATGATTGTCAAAGTCATTCCCCGCTTGTT
AAGGCCAATGGAGACGGGAAGGCGGTCCATCAAGCCAGCCCTCGTCCACG
GAGACCTGTGGTGCGGAAATGCCGCTATCAATTCGGCCACCGGAAGGCCG
TTGATATATGATCCTGCCAGCTTCTATGCGCACAATGAGTAAATCGGGCT
GTTTCGCCGTCCTTTACAAGTGGTGAGCCTTGGTTCTTCAGCCTGGGCTC
AAAGATATCGGATTGATGTCGAGGACCAAGATCAGACAGAAAGCTATTTC
TTGAAGATGTCGCACTCCGATCATCAACCCACTTTCCCTGGCCCACCAGT
GATTGTGGCAGACGAAATTCCGACGGAAACACCAATTGACGCCGTGGTTT
TATCAGTGTCATCGAAGAAATGAGACGTCTGGTTACGAAGTACCCGGGAG
GCTATGAGGAGTACGCCAGGACGTCTTGTATCAATATATAAGCGCTTCAA
TTTACAGGCCGCGGCCCTCTTTCCCAAGGTTACTAGCTTTCGAGACTCAT
GAATTGGGCAATTGGCGTCCTGAGAGAAATGGGTTTACGAGGAGTTACTT
TGATGCCTATCATTCAATCATCCCAAAGACTGCCCCAACAGAAGACTATG
ATGACCGGATTGCACTATATTCAATATATCATTAGGGGTCCATGGCAAGG
AAGCCCTCAGAGGGGAATTCGAATCTACTTTAGCAATCCACAGCATAATT
GGAAGCTTCACTCCTAAGCCAAATGGATGGGGATCTTTCAAGGCACTTCC
AGGCGTACATTATTATTTCTGTCGATTCTATGAACTTGCAGAGCATGCCC
CCAAGCCAGCTGAGTTTTGCCAGATGGTCGCCTTTCTCCATTCGAGGAGC
GAATCGCCAAACGGAAAATTCGGGTTTCACCTTGTGACATACAACGGCGA
TCTGCCCCAGGAGAATGGATACACTGACACATGGGAGGAATTCTTCAGAA
TTGGCTTTGAGCACATGATCGATATGAACATCGAGCGTGGTGGGGTATGG
GCTGAGCTGGAAGGCTTATATACTGCTATGATTGTCAAAGTCATTCCCCG
CTTGTTAAGGCCAATGGAGACGGGAAGGCGGTCCATCAAGCCAGCCCTCG
TCCACGGAGACCTGTGGTGCGGAAATGCCGCTATCAATTCGGCCACCGGA
AGGCCGTTGATATATGATCCTGCCAGCTTCTATGCGCACAATGAGTAAAT
CGGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGCCTTGGTTCTTCAGCCT
GGGCTCAAAGATATCGGATTGATGTCGAGGACCAAGATCAGACAGAAAGC
TATTTCTTGAAGATGTCGCACTCCGATCATCAACCCACTTTCCCTGGCCC
ACCAGTGATTGTGGCAGACGAAATTCCGACGGAAACACCAATTGACGCCG
TGGTTTTATCAGTGTCATCGAAGAAATGAGACGTCTGGTTACGAAGTACC
CGGGAGGCTATGAGGAGTACGCCAGGACGTCTTGTATCAATATATAAGCG
CTTCAATTTACAGGCCGCGGCCCTCTTTCCCAAGGTTACTAGCTTTCGAG
ACTCATGAATTGGGCAATTGGCGTCCTGAGAGAAATGGGTTTACGAGGAG
TTACTTTGATGCCTATCATTCAATCATCCCAAAGACTGCCCCAACAGAAG
ACTATGATGACCGGATTGCACTATATTCAATATATCATTAGGGGTCCATG
GCAAGGAAGCCCTCAGAGGGGAATTCGAATCTACTTTAGCAATCCACAGC
ATAATTGGAAGCTTCACTCCTAAGCCAAATGGATGGGGATCTTTCAAGGC
ACTTCCAGGCGTACATTATTATTTCTGTCGATTCTATGAACTTGCAGAGC
ATGCCCCCAAGCCAGCTGAGTTTTGCCAGATGGTCGCCTTTCTCCATTCG
AGGAGCGAATCGCCAAACGGAAAATTCGGGTTTCACCTTGTGACATACAA
CGGCGATCTGCCCCAGGAGAATGGATACACTGACACATGGGAGGAATTCT
TCAGAATTGGCTTTGAGCACATGATCGATATGAACATCGAGCGTGGTGGG
GTATGGGCTGAGCTGGAAGGCTTATATACTGCTATGATTGTCAAAGTCAT
TCCCCGCTTGTTAAGGCCAATGGAGACGGGAAGGCGGTCCATCAAGCCAG
CCCTCGTCCACGGAGACCTGTGGTGCGGAAATGCCGCTATCAATTCGGCC
ACCGGAAGGCCGTTGATATATGATCCTGCCAGCTTCTATGCGCACAATGA
GTAAATCGGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGCCTTGGTTCTT
CAGCCTGGGCTCAAAGATATCGGATTGATGTCGAGGACCAAGATCAGACA
GAAAGCTATTTCTTGAAGATGTCGCACTCCGATCATCAACCCACTTTCCC
TGGCCCACCAGTGATTGTGGCAGACGAAATTCCGACGGAAACACCAATTG
ACGCCGTGGTTTTATCAGTGTCATCGAAGAAATGAGACGTCTGGTTACGA
AGTACCCGGGAGGCTATGAGGAGTACGCCAGGACGTCTTGTATCAATATA
TAAGCGCTTCAATTTACAGGCCGCGGCCCTCTTTCCCAAGGTTACTAGCT
TTCGAGACTCATGAATTGGGCAATTGGCGTCCTGAGAGAAATGGGTTTAC
GAGGAGTTACTTTGATGCCTATCATTCAATCATCCCAAAGACTGCCCCAA
CAGAAGACTATGATGACCGGATTGCACTATATTCAATATATCATTAGGGG
TCCATGGCAAGGAAGCCCTCAGAGGGGAATTCGAATCTACTTTAGCAATC
CACAGCATAATTGGAAGCTTCACTCCTAAGCCAAATGGATGGGGATCTTT
CAAGGCACTTCCAGGCGTACATTATTATTTCTGTCGATTCTATGAACTTG
CAGAGCATGCCCCCAAGCCAGCTGAGTTTTGCCAGATGGTCGCCTTTCTC
CATTCGAGGAGCGAATCGCCAAACGGAAAATTCGGGTTTCACCTTGTGAC
ATACAACGGCGATCTGCCCCAGGAGAATGGATACACTGACACATGGGAGG
AATTCTTCAGAATTGGCTTTGAGCACATGATCGATATGAACATCGAGCGT
GGTGGGGTATGGGCTGAGCTGGAAGGCTTATATACTGCTATGATTGTCAA
AGTCATTCCCCGCTTGTTAAGGCCAATGGAGACGGGAAGGCGGTCCATCA
AGCCAGCCCTCGTCCACGGAGACCTGTGGTGCGGAAATGCCGCTATCAAT
TCGGCCACCGGAAGGCCGTTGATATATGATCCTGCCAGCTTCTATGCGCA
CAATGAGTAAATCGGGCTGTTTCGCCGTCCTTTACAAGTGGTGAGCCTTG
GTTCTTCAGCCTGGGCTCAAAGATATCGGATTGATGTCGAGGACCAAGAT
CAGACAGAAAGCTATTTCTTGAAGATGTCGCACTCCGATCATCAACCCAC
TTTCCCTGGCCCACCAGTGATTGTGGCAGACGAAATTCCGACGGAAACAC
CAATTGACGCCGTGGTTTTATCAGTGTCATCGAAGAAATGAGACGTCTGG
TTACGAAGTACCCGGGAGGCTATGAGGAGTACGCCAGGACGTCTTGTATC
AATATATAAGCGCTTCAATTTACAGGCCGCGGCCCTCTTTCCCAAGGTTA
CTAGCTTTCGAGACTCATGAATTGGGCAATTGGCGTCCTGAGAGAAATGG
GTTTACGAGGAGTTACTTTGATGCCTATCATTCAATCATCCCAAAGACTG
CCCCAACAGAAGACTATGATGACCGGATTGCACTATATTCAATATATCAT
TAGGGGTCCATGGCAAGGAAGCCCTCAGAGGGGAATTCGAATCTACTTTA
GCAATCCACAGCATAATTGGAAGCTTCACTCCTAAGCCAAATGGATGGGG
ATCTTTCAAGGCACTTCCAGGCGTACATTATTATTTCTGTCGATTCTATG
AACTTGCAGAGCATGCCCCCAAGCCAGCTGAGTTTTGCCAGATGGTCGCC
TTTCTCCATTCGAGGAGCGAATCGCCAAACGGAAAATTCGGGTTTCACCT
TGTGACATACAACGGCGATCTGCCCCAGGAGAATGGATACACTGACACAT
GGGAGGAATTCTTCAGAATTGGCTTTGAGCACATGATCGATATGAACATC
GAGCGTGGTGGGGTATGGGCTGAGCTGGAAGGCTTATATACTGCTATGAT
TGTCAAAGTCATTCCCCGCTTGTTAAGGCCAATGGAGACGGGAAGGCGGT
CCATCAAGCCAGCCCTCGTCCACGGAGACCTGTGGTGCGGAAATGCCGCT
ATCAATTCGGCCACCGGAAGGCCGTTGATATATGATCCTGCCAGCTTCTA
TGCGCACAATGAGTAAATCGGGCTGTTTCGCCGTCCTTTACAAGTGGTGA
GCCTTGGTTCTTCAGCCTGGGCTCAAAGATATCGGATTGATGTCGAGGAC
CAAGATCAGACAGAAAGCTATTTCTTGAAGATGTCGCACTCCGATCATCA
ACCCACTTTCCCTGGCCCACCAGTGATTGTGGCAGACGAAATTCCGACGG
AAACACCAATTGACGCCGTGGTTTTATCAGTGTCATCGAAGAAATGAGAC
GTCTGGTTACGAAGTACCCGGGAGGCTATGAGGAGTACGCCAGGACGTCT
TGTATCAATATATAAGCGCTTCAATTTACAGGCCGCGGCCCTCTTTCCCA
AGGTTACTAGCTTTCGAGACTCATGAATTGGGCAATTGGCGTCCTGAGAG
AAATGGGTTTACGAGGAGTTACTTTGATGCCTATCATTCAATCATCCCAA
AGACTGCCCCAACAGAAGACTATGATGACCGGATTGCACTATATTCAATA
TATCATTAGGGGTCCATGGCAAGGAAGCCCTCAGAGGGGAATTCGAATCT
ACTTTAGCAATCCACAGCATAATTGGAAGCTTCACTCCTAAGCCAAATGG
ATGGGGATCTTTCAAGGCACTTCCAGGCGTACATTATTATTTCTGTCGAT
TCTATGAACTTGCAGAGCATGCCCCCAAGCCAGCTGAGTTTTGCCAGATG
GTCGCCTTTCTCCATTCGAGGAGCGAATCGCCAAACGGAAAATTCGGGTT
TCACCTTGTGACATACAACGGCGATCTGCCCCAGGAGAATGGATACACTG
ACACATGGGAGGAATTCTTCAGAATTGGCTTTGAGCACATGATCGATATG
AACATCGAGCGTGGTGGGGTATGGGCTGAGCTGGAAGGCTTATATACTGC
TATGATTGTCAAAGTCATTCCCCGCTTGTTAAGGCCAATGGAGACGGGAA
GGCGGTCCATCAAGCCAGCCCTCGTCCACGGAGACCTGTGGTGCGGAAAT
GCCGCTATCAATTCGGCCACCGGAAGGCCGTTGATATATGATCCTGCCAG
CTTCTATGCGCACAATGAGTAAATCGGGCTGTTTCGCCGTCCTTTACAAG
TGGTGAGCCTTGGTTCTTCAGCCTGGGCTCAAAGATATCGGATTGATGTC
GAGGACCAAGATCAGACAGAAAGCTATTTCTTGAAGATGTCGCACTCCGA
TCATCAACCCACTTTCCCTGGCCCACCAGTGATTGTGGCAGACGAAATTC
CGACGGAAACACCAATTGACGCCGTGGTTTTATCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011118-T1.utr3p1 | KJC3_011118-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR016477 |
| DBxref | PFAM:PF03881 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5289585..5291219 - |
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