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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:164511..167539- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011256-T1 ID=KJC3_011256-T1|Name=KJC3_011256-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3029bp|location=Sequence derived from alignment at ch8:164511..167539- (Aspergillus niger KJC3)
AATTAATTGACTTAGATTTGTGTGTCTCATCCACTCTCGGCCCCTACGGA
TACGAGCTACGCAACCTGGAATCTCCTTTGCAAACTAATTCAAGCAAATA
TTGGCCCAACAACCTTTTGGATGGCTTCCCATTGAGCTACTCAATTCCAG
AATATTAAAGAAAGGAGCGAGAGAGGAGAAGACAATAAGAGAGGGAAAAT
AAATGCGCGGCTGGTCACTCTTCCACATATATGATGCGCTCGTGTCCGCC
CTAAAATATGGAGGGCTCACTCGCTCCTAATTGAGGTACGTGTCTAATTT
ATTGTCGTATAGTAAAGCTCTCGCTATCCAAACGGCTTTGCTTATCACTG
GGGCCGGTTCATGGTGGCCTCGTCCTTGTAGTGTGTTGTCTTAATGAGCG
GTAGGAACACCATATACTTCCACGCAGGCGCTAAAAGCCACCGACCCTTA
GCTTGGAGGTCAGCCCATGTCCGTGAAAAAGCCATCCTCAATCCGCATAT
ACCTCGGCCAGTTGTTTTACCTCTCTCTCCTGGTTTAAATGCACCATAAG
AGGGTAGTTGTAGCTGTTCTGCAAGCCTTGGCAGCCGTACTACTGCTTAG
GCCTTCCACTTCTGAGGTAAAATTTTATTTAAATGCCGTGACCTCGAGGT
TTGATGAGTCGGAGATCAGCGGCACTCAATCTGCAGGCTTTTCTGGTGGT
GAGTGTTTAAGTTGAATTGTGAGTTCACAGAACCAGGAACCACGTCAACG
CTAAGATTAGGGCGATTCGGTCAAGTGATCTACAATTCCTACTGTGTATA
TTCTCCGATTGGATGGATCTTGTCAGTGTGTTCACACAGCAGTGGTGGGT
AACTCAATTTCATGCCATTTTTGAACACAAAGTTACTCGGCCTGGTGGCT
GTGCAAGCCACCTTTGGCCTCAGGTGTCTCGGCGAAGCTTTTAACTTATA
GTCTCGAAGTACTCCTGGCGAGAACCGTCAACAAGCATACTTTGGTTATG
GCTCCCTAAAATCTGGCAGCTTGATCCAATGGTAGCAAGCACGGAGGTTT
CCTTTCTTGATGTCTCTAGACTAAGCTCCCGAACCCGGGCTCTGGCCAAT
ACTACTTCAGGAGACACCTAGGATTTTATGGTACTACGGCATCCACCTAG
AGATGAGCAATGTATAAGTGAGTCTTCACGGGTTGCATGCCTGTAAGCAC
TTACATGGGCCTTAGCTACCTGTATTCGACATCTGGGACGCCTGTCTGCT
GGGTGAACATAAGCTTATAGGCCTGCTCCAGCATGTGACACCTGCGGACA
TGCGGGCTTACTCTCAAGGAAGTGAAGGGCGCTGCTTAATTTTAACTCAA
TTCGGCCTCACGCTGATGTTGATCACTACTTCACACGTCTGCCATCGATC
TCCCATTAGGCAATTGGGATAACTTAAGGCGTACTGCGATGGTGTGCCGA
ATGCCTATAAAGCCATAATGGCCGTAGACACTAATGGTGTGGAAGAATCC
CTCCTAGACCAATTTCAAGAAGATAACTGCAACAATGACTACATTCCTTG
TTCAAGAAGACACTTACAACACGAACAATTTCGACTTCAGAATAAGGGGA
ATACCGGAATCTTTTAGCACCTTCGTCATTGACTTCAAGGCTTTCTTTGG
TGTCAAACCCCAGCATGTCAGCCGCAGGTTTAGCATCTCCCTCTCAGACC
TCAGCTACCAGCCAAAGGTACGCGGTCCGCTGTCTCCTTTTCTCCGGTCA
CTCATGTACCAACACTGCCATATAGATCTACAACCCCCGTGCCGACTGGG
CAGTGACTGCTGCGTTCACCTCCTTCGAGGCGCTCCAGGCTTCCACTCTT
GATCCAGTGCAACGCTTTGCAACTATCGGTACTGGCTCAGGCACCGACGC
CATTGCAGCGCTGGATGTCTTCCCTCGCCTTCGCAGCATCGTCATGACAG
ATCTCCATGATGAAGTTGTCGACAAGGCCAAGATCAATCTAATGTCTGCC
ACTGAGAAGGCCAATGGCCGGGTGAGGACAGTTGCCAGAGAGGCCACTGG
ACTGTCTGGTCATAGCTTAGTGCCCCTTAAGGGCCAGGTGCCTTTTGACC
TGATATATGAGTGGGCCTTTTCTCTCGATTTATTTTCGTTCATACTCTAG
AGTCAAACGAAACTGATGTTTCACCCAGGAACTTGCCCAACATTCCACTG
CCGGATGACGCTGATCTCCTAGACGGTCAGACCTCCTCCACCTATTTCGA
CTGCTCAGACGTCTCGGGGGATGTCCCCTCGTTTGTATCCAAGGCTCTTC
TTGACCTCCACTATGTCTGTCTGCTGCAGGCAAGGACCTTCGATCTGCTC
ACTGAAACCGGTGTCGTCCTGTCAATCATGGGCGGCAGAGTCCCAATCGA
CACCATGCTCCAGCTAGCAGATGCAGCAGGCTTCACCGGAAGAATTCTGT
CCATGTCTTGGAAGGTGCAAAGTGAACCAGACTCGGTGATTGAAGGGTAT
GCGACTCAGCAGGAAAAGGGACTTGGACCGGTGAGTTTGATGTCACCCCG
CATTATGGGTTTGTGAGTCCTTATAAAATTGAAACGGCAAGCTGATCACG
AACTTGCAGTTTTATTTCTATCGCGTGAGTACACTACGGCATGTTTTCGG
CCACCTAACGGGAGCTGAGGCCGGACTCCGTGCGCTGGAGATCGAGAATG
AGCTTCTGCCAGACCGTCTGGATGCAGTAACGGCTTTGAAAGCTCAAAAA
CAAGGTATAGATGTCGGTCACCCAGTTGTCGTTATGGCTAGCACTAGACA
ATGAGGTAGCCTTGTGGTTGCTTGATCGTTGTCGGTGTTATATTTCCGTG
ACATGTTTCGAAGGCTAGGAAATCATCAGAAACCGATTAGGAAAGGATTC
TGTACAAAAGTAGTTGTGGTTTCAGAAGACCGGCTTTATGATCGTGGGTT
TCTTTCACTAATCAGCTCGTTATTGCTCTTCCTTTCTCAGATTGTCACCG
TAGCTCATTTAATCGAATGAAACTCCTTG back to topCoding sequence (CDS) from alignment at ch8:164511..167539- >KJC3_011256-T1 ID=KJC3_011256-T1|Name=KJC3_011256-T1|organism=Aspergillus niger KJC3|type=CDS|length=4260bp|location=Sequence derived from alignment at ch8:164511..167539- (Aspergillus niger KJC3)
TTTTATTTCTATCGCGTGAGTACACTACGGCATGTTTTCGGCCACCTAAC
GGGAGCTGAGGCCGGACTCCGTGCGCTGGAGATCGAGAATGAGCTTCTGC
CAGACCGTCTGGATGCAGTAACGGCTTTGAAAGCTCAAAAACAAGGTATA
GATGTCGGTCACCCAGTTGTCGTTATGGCTAGCACTAGACAATGAGAACT
TGCCCAACATTCCACTGCCGGATGACGCTGATCTCCTAGACGGTCAGACC
TCCTCCACCTATTTCGACTGCTCAGACGTCTCGGGGGATGTCCCCTCGTT
TGTATCCAAGGCTCTTCTTGACCTCCACTATGTCTGTCTGCTGCAGGCAA
GGACCTTCGATCTGCTCACTGAAACCGGTGTCGTCCTGTCAATCATGGGC
GGCAGAGTCCCAATCGACACCATGCTCCAGCTAGCAGATGCAGCAGGCTT
CACCGGAAGAATTCTGTCCATGTCTTGGAAGGTGCAAAGTGAACCAGACT
CGGTGATTGAAGGGTATGCGACTCAGCAGGAAAAGGGACTTGGACCGATC
TACAACCCCCGTGCCGACTGGGCAGTGACTGCTGCGTTCACCTCCTTCGA
GGCGCTCCAGGCTTCCACTCTTGATCCAGTGCAACGCTTTGCAACTATCG
GTACTGGCTCAGGCACCGACGCCATTGCAGCGCTGGATGTCTTCCCTCGC
CTTCGCAGCATCGTCATGACAGATCTCCATGATGAAGTTGTCGACAAGGC
CAAGATCAATCTAATGTCTGCCACTGAGAAGGCCAATGGCCGGGTGAGGA
CAGTTGCCAGAGAGGCCACTGGACTGTCTGGTCATAGCTTAGTGCCCCTT
AAGGGCCAGGTGCCTTTTGACCTGATATATGAATGACTACATTCCTTGTT
CAAGAAGACACTTACAACACGAACAATTTCGACTTCAGAATAAGGGGAAT
ACCGGAATCTTTTAGCACCTTCGTCATTGACTTCAAGGCTTTCTTTGGTG
TCAAACCCCAGCATGTCAGCCGCAGGTTTAGCATCTCCCTCTCAGACCTC
AGCTACCAGCCAAAGTTTTATTTCTATCGCGTGAGTACACTACGGCATGT
TTTCGGCCACCTAACGGGAGCTGAGGCCGGACTCCGTGCGCTGGAGATCG
AGAATGAGCTTCTGCCAGACCGTCTGGATGCAGTAACGGCTTTGAAAGCT
CAAAAACAAGGTATAGATGTCGGTCACCCAGTTGTCGTTATGGCTAGCAC
TAGACAATGAGAACTTGCCCAACATTCCACTGCCGGATGACGCTGATCTC
CTAGACGGTCAGACCTCCTCCACCTATTTCGACTGCTCAGACGTCTCGGG
GGATGTCCCCTCGTTTGTATCCAAGGCTCTTCTTGACCTCCACTATGTCT
GTCTGCTGCAGGCAAGGACCTTCGATCTGCTCACTGAAACCGGTGTCGTC
CTGTCAATCATGGGCGGCAGAGTCCCAATCGACACCATGCTCCAGCTAGC
AGATGCAGCAGGCTTCACCGGAAGAATTCTGTCCATGTCTTGGAAGGTGC
AAAGTGAACCAGACTCGGTGATTGAAGGGTATGCGACTCAGCAGGAAAAG
GGACTTGGACCGATCTACAACCCCCGTGCCGACTGGGCAGTGACTGCTGC
GTTCACCTCCTTCGAGGCGCTCCAGGCTTCCACTCTTGATCCAGTGCAAC
GCTTTGCAACTATCGGTACTGGCTCAGGCACCGACGCCATTGCAGCGCTG
GATGTCTTCCCTCGCCTTCGCAGCATCGTCATGACAGATCTCCATGATGA
AGTTGTCGACAAGGCCAAGATCAATCTAATGTCTGCCACTGAGAAGGCCA
ATGGCCGGGTGAGGACAGTTGCCAGAGAGGCCACTGGACTGTCTGGTCAT
AGCTTAGTGCCCCTTAAGGGCCAGGTGCCTTTTGACCTGATATATGAATG
ACTACATTCCTTGTTCAAGAAGACACTTACAACACGAACAATTTCGACTT
CAGAATAAGGGGAATACCGGAATCTTTTAGCACCTTCGTCATTGACTTCA
AGGCTTTCTTTGGTGTCAAACCCCAGCATGTCAGCCGCAGGTTTAGCATC
TCCCTCTCAGACCTCAGCTACCAGCCAAAGTTTTATTTCTATCGCGTGAG
TACACTACGGCATGTTTTCGGCCACCTAACGGGAGCTGAGGCCGGACTCC
GTGCGCTGGAGATCGAGAATGAGCTTCTGCCAGACCGTCTGGATGCAGTA
ACGGCTTTGAAAGCTCAAAAACAAGGTATAGATGTCGGTCACCCAGTTGT
CGTTATGGCTAGCACTAGACAATGAGAACTTGCCCAACATTCCACTGCCG
GATGACGCTGATCTCCTAGACGGTCAGACCTCCTCCACCTATTTCGACTG
CTCAGACGTCTCGGGGGATGTCCCCTCGTTTGTATCCAAGGCTCTTCTTG
ACCTCCACTATGTCTGTCTGCTGCAGGCAAGGACCTTCGATCTGCTCACT
GAAACCGGTGTCGTCCTGTCAATCATGGGCGGCAGAGTCCCAATCGACAC
CATGCTCCAGCTAGCAGATGCAGCAGGCTTCACCGGAAGAATTCTGTCCA
TGTCTTGGAAGGTGCAAAGTGAACCAGACTCGGTGATTGAAGGGTATGCG
ACTCAGCAGGAAAAGGGACTTGGACCGATCTACAACCCCCGTGCCGACTG
GGCAGTGACTGCTGCGTTCACCTCCTTCGAGGCGCTCCAGGCTTCCACTC
TTGATCCAGTGCAACGCTTTGCAACTATCGGTACTGGCTCAGGCACCGAC
GCCATTGCAGCGCTGGATGTCTTCCCTCGCCTTCGCAGCATCGTCATGAC
AGATCTCCATGATGAAGTTGTCGACAAGGCCAAGATCAATCTAATGTCTG
CCACTGAGAAGGCCAATGGCCGGGTGAGGACAGTTGCCAGAGAGGCCACT
GGACTGTCTGGTCATAGCTTAGTGCCCCTTAAGGGCCAGGTGCCTTTTGA
CCTGATATATGAATGACTACATTCCTTGTTCAAGAAGACACTTACAACAC
GAACAATTTCGACTTCAGAATAAGGGGAATACCGGAATCTTTTAGCACCT
TCGTCATTGACTTCAAGGCTTTCTTTGGTGTCAAACCCCAGCATGTCAGC
CGCAGGTTTAGCATCTCCCTCTCAGACCTCAGCTACCAGCCAAAGTTTTA
TTTCTATCGCGTGAGTACACTACGGCATGTTTTCGGCCACCTAACGGGAG
CTGAGGCCGGACTCCGTGCGCTGGAGATCGAGAATGAGCTTCTGCCAGAC
CGTCTGGATGCAGTAACGGCTTTGAAAGCTCAAAAACAAGGTATAGATGT
CGGTCACCCAGTTGTCGTTATGGCTAGCACTAGACAATGAGAACTTGCCC
AACATTCCACTGCCGGATGACGCTGATCTCCTAGACGGTCAGACCTCCTC
CACCTATTTCGACTGCTCAGACGTCTCGGGGGATGTCCCCTCGTTTGTAT
CCAAGGCTCTTCTTGACCTCCACTATGTCTGTCTGCTGCAGGCAAGGACC
TTCGATCTGCTCACTGAAACCGGTGTCGTCCTGTCAATCATGGGCGGCAG
AGTCCCAATCGACACCATGCTCCAGCTAGCAGATGCAGCAGGCTTCACCG
GAAGAATTCTGTCCATGTCTTGGAAGGTGCAAAGTGAACCAGACTCGGTG
ATTGAAGGGTATGCGACTCAGCAGGAAAAGGGACTTGGACCGATCTACAA
CCCCCGTGCCGACTGGGCAGTGACTGCTGCGTTCACCTCCTTCGAGGCGC
TCCAGGCTTCCACTCTTGATCCAGTGCAACGCTTTGCAACTATCGGTACT
GGCTCAGGCACCGACGCCATTGCAGCGCTGGATGTCTTCCCTCGCCTTCG
CAGCATCGTCATGACAGATCTCCATGATGAAGTTGTCGACAAGGCCAAGA
TCAATCTAATGTCTGCCACTGAGAAGGCCAATGGCCGGGTGAGGACAGTT
GCCAGAGAGGCCACTGGACTGTCTGGTCATAGCTTAGTGCCCCTTAAGGG
CCAGGTGCCTTTTGACCTGATATATGAATGACTACATTCCTTGTTCAAGA
AGACACTTACAACACGAACAATTTCGACTTCAGAATAAGGGGAATACCGG
AATCTTTTAGCACCTTCGTCATTGACTTCAAGGCTTTCTTTGGTGTCAAA
CCCCAGCATGTCAGCCGCAGGTTTAGCATCTCCCTCTCAGACCTCAGCTA
CCAGCCAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011256-T1.utr3p1 | KJC3_011256-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:164511..167539 - |
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