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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:190845..191688- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011270-T1 ID=KJC3_011270-T1|Name=KJC3_011270-T1|organism=Aspergillus niger KJC3|type=mRNA|length=844bp|location=Sequence derived from alignment at ch8:190845..191688- (Aspergillus niger KJC3)
CTACCGTGAGCTCACCCACCGTACCATTATCACCCAGCCACGATGTCACC
CACAATCCTCTTCGTCCCCGGTTTCTGGGAGGGCCCAAAAGTTTTCACCC
CCGTATGCGATCTCCTGCAGGCTGCCGGTTTCAAGACCGATGTCTGCACA
CTACCCAGCACAGGCACCATCTCGCCCGGGAACCCGGCCATGGCCGATGA
CATAGCCGCCGTGCGCGACCATCTGACGAGCATTGTACAGCGCGGAGAAG
AGGTTATTCTTGTATTGCACTCAGCCGGTGGATTTCTCGGTAGCGCTGCC
ATGGAGGGCCTGAGCAAGTCGGCTGTCGGACAGGGTGGAATCGTCAAGAT
TGTCTTCTTGACTGCAGCGGTTTTCCCCGAAGGCCACGAGCACGAGGATA
TGCCGTTTGCTGTTGTCGAGGTTGGTTATCCAGTTTATTGTGATTTTTGC
TCCCATCATCTCATGGTTGTTTCCGCATCTTTCCTTGATCAAAAGATATC
ATGACTGACGGGCGTTTTGACAGGGAGGTGCGATGTACTGTGCCAAGCCC
GAGGTGCTTCTTTTGGACGATGTCCCCGAGCCAGAAAAGGCAGAGTGGCT
GGCTGAGCTTAAGCCCCAGCCGGCTGATGGTTGGAACGGCACGGTACCCT
ACGCTGGGTGGAAGGATGTCCCCAGTGTTTACCTCGTCTGCGAGGGAGAT
AATGCTCTTCCAGCGGGCCTGCAGGAGCAACTAGCGAACCTGGCCGGAAG
CCAGATTGAGCGGTGCAGTGCTGGCCACATGCCACAGATAAGTCAGCCTT
CGCGGGTGGCTGAGGTTATTCGTGCTGCAGCGGCATCTATTTGA back to topCoding sequence (CDS) from alignment at ch8:190845..191688- >KJC3_011270-T1 ID=KJC3_011270-T1|Name=KJC3_011270-T1|organism=Aspergillus niger KJC3|type=CDS|length=1398bp|location=Sequence derived from alignment at ch8:190845..191688- (Aspergillus niger KJC3)
GGAGGTGCGATGTACTGTGCCAAGCCCGAGGTGCTTCTTTTGGACGATGT
CCCCGAGCCAGAAAAGGCAGAGTGGCTGGCTGAGCTTAAGCCCCAGCCGG
CTGATGGTTGGAACGGCACGGTACCCTACGCTGGGTGGAAGGATGTCCCC
AGTGTTTACCTCGTCTGCGAGGGAGATAATGCTCTTCCAGCGGGCCTGCA
GGAGCAACTAGCGAACCTGGCCGGAAGCCAGATTGAGCGGTGCAGTGCTG
GCCACATGCCACAGATAAGTCAGCCTTCGCGGGTGGCTGAGGTTATTCGT
GCTGCAGCGGCATCTATTTGAATGTCACCCACAATCCTCTTCGTCCCCGG
TTTCTGGGAGGGCCCAAAAGTTTTCACCCCCGTATGCGATCTCCTGCAGG
CTGCCGGTTTCAAGACCGATGTCTGCACACTACCCAGCACAGGCACCATC
TCGCCCGGGAACCCGGCCATGGCCGATGACATAGCCGCCGTGCGCGACCA
TCTGACGAGCATTGTACAGCGCGGAGAAGAGGTTATTCTTGTATTGCACT
CAGCCGGTGGATTTCTCGGTAGCGCTGCCATGGAGGGCCTGAGCAAGTCG
GCTGTCGGACAGGGTGGAATCGTCAAGATTGTCTTCTTGACTGCAGCGGT
TTTCCCCGAAGGCCACGAGCACGAGGATATGCCGTTTGCTGTTGTCGAGG
GAGGTGCGATGTACTGTGCCAAGCCCGAGGTGCTTCTTTTGGACGATGTC
CCCGAGCCAGAAAAGGCAGAGTGGCTGGCTGAGCTTAAGCCCCAGCCGGC
TGATGGTTGGAACGGCACGGTACCCTACGCTGGGTGGAAGGATGTCCCCA
GTGTTTACCTCGTCTGCGAGGGAGATAATGCTCTTCCAGCGGGCCTGCAG
GAGCAACTAGCGAACCTGGCCGGAAGCCAGATTGAGCGGTGCAGTGCTGG
CCACATGCCACAGATAAGTCAGCCTTCGCGGGTGGCTGAGGTTATTCGTG
CTGCAGCGGCATCTATTTGAATGTCACCCACAATCCTCTTCGTCCCCGGT
TTCTGGGAGGGCCCAAAAGTTTTCACCCCCGTATGCGATCTCCTGCAGGC
TGCCGGTTTCAAGACCGATGTCTGCACACTACCCAGCACAGGCACCATCT
CGCCCGGGAACCCGGCCATGGCCGATGACATAGCCGCCGTGCGCGACCAT
CTGACGAGCATTGTACAGCGCGGAGAAGAGGTTATTCTTGTATTGCACTC
AGCCGGTGGATTTCTCGGTAGCGCTGCCATGGAGGGCCTGAGCAAGTCGG
CTGTCGGACAGGGTGGAATCGTCAAGATTGTCTTCTTGACTGCAGCGGTT
TTCCCCGAAGGCCACGAGCACGAGGATATGCCGTTTGCTGTTGTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011270-T1.utr5p1 | KJC3_011270-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:190845..191688 - |
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