You are here

Home

KJC3_011342-T1, KJC3_011342-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011342-T1
Unique NameKJC3_011342-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:344079..346054-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011342-T1 ID=KJC3_011342-T1|Name=KJC3_011342-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1976bp|location=Sequence derived from alignment at ch8:344079..346054- (Aspergillus niger KJC3)
CTGGGTATAAATGCCCCTCCTCCCTTGCAGATGCCAGCTGTTTAAAAAGA
AAACCTGTAGTGGCTCGTCCAACTTTTCTGGGATTGACCGTGTGCAATCA
TGGCAGGTTCCAAGAAACCAGTTAACATTTTTCGCTTGCGCAATCTCGCT
GACCCCAAGGAGGTCTTCAACTGGAGGCTATGGTTTGCCGTGCTCTCCTT
TGGCCTCATGGGCGCTGCCCGTGGTGTTGACGAGGGTTTGATCTCGGGTG
CCTTTAACTCCAAGGATTTTCAGCGCACTATTCATCTGGACTCGTACAGT
GAGGTTGAACAGACCAACATCAAGGCGAATGTGTCCGCTATGGTGCAAAT
TGGTTCCGTGGGAGGGGCACTCTTGTACGCCATTCACCAAAATGAACCGT
GAAGTCTGTCTGCTGACACTTTTATAGTGCATTCCTTGTGTGCGACCGTA
TTGGACGGCTGTGGGCGACTCGCCAACTCTGCGTTCTTTGGATCCTGGGA
ATTGCCATTTTCATGGGCGTCGGTGCCAACGGTAGCCTGGGGGCTGTCTA
TGCTGGTCGCTTCGTGGCCGGACTGGGCGTCGGCCAGACTGTAGTTGTGG
GACCAGTCTACCTGGCTGAGATCGTGAGTGACAAGTTCAATTCCCTGTCG
GGCTTGATTAACCAAAAACAGGCCCCAGCATCCGTCCGCGGGCTCTGCAC
TTGTGTCTTCACCGGCTTCGTTTACCTGGGCATTGTGCTCGCCTACTTCA
CCAACTACGGCTGCCAGATCCATATGGGCGACCACACTCACAAGCGATGG
GTAAGGCATTCATTCACCTTCTCCATGGCAATGTACTGACCCTACCTAGG
AAGTCCCAACTAGTCTCCACATCATGTTTGCCGGCCTCATCTTCCTCCTC
TCCTTCCTCCAATACGAGTCTCCTCGCTTCCTTGTAAAGAAAGGCAAGCC
CGAAGAAGCACTGAAGAACCTTGCGCGCCTCCGCAATCTTCCTCCAGAGC
ATGAATACGTTGTCGAGGAGTTCACGGGTATCCAGAATGCCCATCAGGCG
GAGATGGAGGCTACCATGGGAGCTGGCTGGCTGGGCATTGTCAAGGAGGC
CATCATGGTCCCGAGCAACCTGTACCGGCTGTACCTAGCCGCCATGGCGC
AGCTACTGTCCCAATGGTCTGGAGCGGGATCCATCACGCTGTACGCGCCG
GATCTGTTCAGTCTCCTGGGCATCACGGGGTCCAACGAGTCCCTACTTGT
GACAGCAGTGTTCGGTATCATCAAGCTGGTCGCAGCTGTGATTTGCGCTC
TGTTCCTGGTGGATGTGATTGGGCGCAAACGTGCCCTACTCCTAGGAATC
ACGCTGCAGGCCATCTCGATGATCTACGTGGCTAGCTTCCTCACTGCCGT
GCCGGAGATGGGCATTGTCGATGACTTTGTCCTGCCGGAGTCAAAGAAGG
GTAGTAGCCGCGGAGCCATTGCTATGATCTATATCTCCGGTGTGGGCTGG
GCATTGGGCTGGAACTCCATGCAGTATCTGCTGACCGCAGAACTGTTCCC
GCTACGCATCCGCGCACTGGCTACCTCTGCTGCTATGACGCTGCACTTTG
TCAATCAGTATGGTAATTCCCGAGCGGTGCCCAATATGTTGCTGGGTACT
GCGGAGGGTGGCATCACCCCCAAGGGCACGTTCTGGTTCTTCTCTGCCGT
GACGGTGCTGGGTGGGCTGTGGGTGTGGTTCAGTGTGCCTGAGACAGCGG
GGCGGAGTCTAGAGAGTATGGATCGGTTGTTTGCATTGCCCTGGTATCAA
ATCGGACGGCATGGCAACCGTGATGCCGACCAGCAGGACCAGGTGGTGGC
GGATAAACAACAGCAGGTGGAGGATGGATTTGGAGGGGCGGAGCATCGCG
AGCGGGTGTAACTGTTGCTTGACTATGTTACTTAGCTATCTCCTTCCTGG
TGTTTTATTGAATCCAATGGCAATAA
back to top

Coding sequence (CDS) from alignment at ch8:344079..346054-

>KJC3_011342-T1 ID=KJC3_011342-T1|Name=KJC3_011342-T1|organism=Aspergillus niger KJC3|type=CDS|length=6648bp|location=Sequence derived from alignment at ch8:344079..346054- (Aspergillus niger KJC3)
GAAGTCCCAACTAGTCTCCACATCATGTTTGCCGGCCTCATCTTCCTCCT
CTCCTTCCTCCAATACGAGTCTCCTCGCTTCCTTGTAAAGAAAGGCAAGC
CCGAAGAAGCACTGAAGAACCTTGCGCGCCTCCGCAATCTTCCTCCAGAG
CATGAATACGTTGTCGAGGAGTTCACGGGTATCCAGAATGCCCATCAGGC
GGAGATGGAGGCTACCATGGGAGCTGGCTGGCTGGGCATTGTCAAGGAGG
CCATCATGGTCCCGAGCAACCTGTACCGGCTGTACCTAGCCGCCATGGCG
CAGCTACTGTCCCAATGGTCTGGAGCGGGATCCATCACGCTGTACGCGCC
GGATCTGTTCAGTCTCCTGGGCATCACGGGGTCCAACGAGTCCCTACTTG
TGACAGCAGTGTTCGGTATCATCAAGCTGGTCGCAGCTGTGATTTGCGCT
CTGTTCCTGGTGGATGTGATTGGGCGCAAACGTGCCCTACTCCTAGGAAT
CACGCTGCAGGCCATCTCGATGATCTACGTGGCTAGCTTCCTCACTGCCG
TGCCGGAGATGGGCATTGTCGATGACTTTGTCCTGCCGGAGTCAAAGAAG
GGTAGTAGCCGCGGAGCCATTGCTATGATCTATATCTCCGGTGTGGGCTG
GGCATTGGGCTGGAACTCCATGCAGTATCTGCTGACCGCAGAACTGTTCC
CGCTACGCATCCGCGCACTGGCTACCTCTGCTGCTATGACGCTGCACTTT
GTCAATCAGTATGGTAATTCCCGAGCGGTGCCCAATATGTTGCTGGGTAC
TGCGGAGGGTGGCATCACCCCCAAGGGCACGTTCTGGTTCTTCTCTGCCG
TGACGGTGCTGGGTGGGCTGTGGGTGTGGTTCAGTGTGCCTGAGACAGCG
GGGCGGAGTCTAGAGAGTATGGATCGGTTGTTTGCATTGCCCTGGTATCA
AATCGGACGGCATGGCAACCGTGATGCCGACCAGCAGGACCAGGTGGTGG
CGGATAAACAACAGCAGGTGGAGGATGGATTTGGAGGGGCGGAGCATCGC
GAGCGGGTGTAAGCCCCAGCATCCGTCCGCGGGCTCTGCACTTGTGTCTT
CACCGGCTTCGTTTACCTGGGCATTGTGCTCGCCTACTTCACCAACTACG
GCTGCCAGATCCATATGGGCGACCACACTCACAAGCGATGGTGCATTCCT
TGTGTGCGACCGTATTGGACGGCTGTGGGCGACTCGCCAACTCTGCGTTC
TTTGGATCCTGGGAATTGCCATTTTCATGGGCGTCGGTGCCAACGGTAGC
CTGGGGGCTGTCTATGCTGGTCGCTTCGTGGCCGGACTGGGCGTCGGCCA
GACTGTAGTTGTGGGACCAGTCTACCTGGCTGAGATCATGGCAGGTTCCA
AGAAACCAGTTAACATTTTTCGCTTGCGCAATCTCGCTGACCCCAAGGAG
GTCTTCAACTGGAGGCTATGGTTTGCCGTGCTCTCCTTTGGCCTCATGGG
CGCTGCCCGTGGTGTTGACGAGGGTTTGATCTCGGGTGCCTTTAACTCCA
AGGATTTTCAGCGCACTATTCATCTGGACTCGTACAGTGAGGTTGAACAG
ACCAACATCAAGGCGAATGTGTCCGCTATGGTGCAAATTGGTTCCGTGGG
AGGGGCACTCTTGAAGTCCCAACTAGTCTCCACATCATGTTTGCCGGCCT
CATCTTCCTCCTCTCCTTCCTCCAATACGAGTCTCCTCGCTTCCTTGTAA
AGAAAGGCAAGCCCGAAGAAGCACTGAAGAACCTTGCGCGCCTCCGCAAT
CTTCCTCCAGAGCATGAATACGTTGTCGAGGAGTTCACGGGTATCCAGAA
TGCCCATCAGGCGGAGATGGAGGCTACCATGGGAGCTGGCTGGCTGGGCA
TTGTCAAGGAGGCCATCATGGTCCCGAGCAACCTGTACCGGCTGTACCTA
GCCGCCATGGCGCAGCTACTGTCCCAATGGTCTGGAGCGGGATCCATCAC
GCTGTACGCGCCGGATCTGTTCAGTCTCCTGGGCATCACGGGGTCCAACG
AGTCCCTACTTGTGACAGCAGTGTTCGGTATCATCAAGCTGGTCGCAGCT
GTGATTTGCGCTCTGTTCCTGGTGGATGTGATTGGGCGCAAACGTGCCCT
ACTCCTAGGAATCACGCTGCAGGCCATCTCGATGATCTACGTGGCTAGCT
TCCTCACTGCCGTGCCGGAGATGGGCATTGTCGATGACTTTGTCCTGCCG
GAGTCAAAGAAGGGTAGTAGCCGCGGAGCCATTGCTATGATCTATATCTC
CGGTGTGGGCTGGGCATTGGGCTGGAACTCCATGCAGTATCTGCTGACCG
CAGAACTGTTCCCGCTACGCATCCGCGCACTGGCTACCTCTGCTGCTATG
ACGCTGCACTTTGTCAATCAGTATGGTAATTCCCGAGCGGTGCCCAATAT
GTTGCTGGGTACTGCGGAGGGTGGCATCACCCCCAAGGGCACGTTCTGGT
TCTTCTCTGCCGTGACGGTGCTGGGTGGGCTGTGGGTGTGGTTCAGTGTG
CCTGAGACAGCGGGGCGGAGTCTAGAGAGTATGGATCGGTTGTTTGCATT
GCCCTGGTATCAAATCGGACGGCATGGCAACCGTGATGCCGACCAGCAGG
ACCAGGTGGTGGCGGATAAACAACAGCAGGTGGAGGATGGATTTGGAGGG
GCGGAGCATCGCGAGCGGGTGTAAGCCCCAGCATCCGTCCGCGGGCTCTG
CACTTGTGTCTTCACCGGCTTCGTTTACCTGGGCATTGTGCTCGCCTACT
TCACCAACTACGGCTGCCAGATCCATATGGGCGACCACACTCACAAGCGA
TGGTGCATTCCTTGTGTGCGACCGTATTGGACGGCTGTGGGCGACTCGCC
AACTCTGCGTTCTTTGGATCCTGGGAATTGCCATTTTCATGGGCGTCGGT
GCCAACGGTAGCCTGGGGGCTGTCTATGCTGGTCGCTTCGTGGCCGGACT
GGGCGTCGGCCAGACTGTAGTTGTGGGACCAGTCTACCTGGCTGAGATCA
TGGCAGGTTCCAAGAAACCAGTTAACATTTTTCGCTTGCGCAATCTCGCT
GACCCCAAGGAGGTCTTCAACTGGAGGCTATGGTTTGCCGTGCTCTCCTT
TGGCCTCATGGGCGCTGCCCGTGGTGTTGACGAGGGTTTGATCTCGGGTG
CCTTTAACTCCAAGGATTTTCAGCGCACTATTCATCTGGACTCGTACAGT
GAGGTTGAACAGACCAACATCAAGGCGAATGTGTCCGCTATGGTGCAAAT
TGGTTCCGTGGGAGGGGCACTCTTGAAGTCCCAACTAGTCTCCACATCAT
GTTTGCCGGCCTCATCTTCCTCCTCTCCTTCCTCCAATACGAGTCTCCTC
GCTTCCTTGTAAAGAAAGGCAAGCCCGAAGAAGCACTGAAGAACCTTGCG
CGCCTCCGCAATCTTCCTCCAGAGCATGAATACGTTGTCGAGGAGTTCAC
GGGTATCCAGAATGCCCATCAGGCGGAGATGGAGGCTACCATGGGAGCTG
GCTGGCTGGGCATTGTCAAGGAGGCCATCATGGTCCCGAGCAACCTGTAC
CGGCTGTACCTAGCCGCCATGGCGCAGCTACTGTCCCAATGGTCTGGAGC
GGGATCCATCACGCTGTACGCGCCGGATCTGTTCAGTCTCCTGGGCATCA
CGGGGTCCAACGAGTCCCTACTTGTGACAGCAGTGTTCGGTATCATCAAG
CTGGTCGCAGCTGTGATTTGCGCTCTGTTCCTGGTGGATGTGATTGGGCG
CAAACGTGCCCTACTCCTAGGAATCACGCTGCAGGCCATCTCGATGATCT
ACGTGGCTAGCTTCCTCACTGCCGTGCCGGAGATGGGCATTGTCGATGAC
TTTGTCCTGCCGGAGTCAAAGAAGGGTAGTAGCCGCGGAGCCATTGCTAT
GATCTATATCTCCGGTGTGGGCTGGGCATTGGGCTGGAACTCCATGCAGT
ATCTGCTGACCGCAGAACTGTTCCCGCTACGCATCCGCGCACTGGCTACC
TCTGCTGCTATGACGCTGCACTTTGTCAATCAGTATGGTAATTCCCGAGC
GGTGCCCAATATGTTGCTGGGTACTGCGGAGGGTGGCATCACCCCCAAGG
GCACGTTCTGGTTCTTCTCTGCCGTGACGGTGCTGGGTGGGCTGTGGGTG
TGGTTCAGTGTGCCTGAGACAGCGGGGCGGAGTCTAGAGAGTATGGATCG
GTTGTTTGCATTGCCCTGGTATCAAATCGGACGGCATGGCAACCGTGATG
CCGACCAGCAGGACCAGGTGGTGGCGGATAAACAACAGCAGGTGGAGGAT
GGATTTGGAGGGGCGGAGCATCGCGAGCGGGTGTAAGCCCCAGCATCCGT
CCGCGGGCTCTGCACTTGTGTCTTCACCGGCTTCGTTTACCTGGGCATTG
TGCTCGCCTACTTCACCAACTACGGCTGCCAGATCCATATGGGCGACCAC
ACTCACAAGCGATGGTGCATTCCTTGTGTGCGACCGTATTGGACGGCTGT
GGGCGACTCGCCAACTCTGCGTTCTTTGGATCCTGGGAATTGCCATTTTC
ATGGGCGTCGGTGCCAACGGTAGCCTGGGGGCTGTCTATGCTGGTCGCTT
CGTGGCCGGACTGGGCGTCGGCCAGACTGTAGTTGTGGGACCAGTCTACC
TGGCTGAGATCATGGCAGGTTCCAAGAAACCAGTTAACATTTTTCGCTTG
CGCAATCTCGCTGACCCCAAGGAGGTCTTCAACTGGAGGCTATGGTTTGC
CGTGCTCTCCTTTGGCCTCATGGGCGCTGCCCGTGGTGTTGACGAGGGTT
TGATCTCGGGTGCCTTTAACTCCAAGGATTTTCAGCGCACTATTCATCTG
GACTCGTACAGTGAGGTTGAACAGACCAACATCAAGGCGAATGTGTCCGC
TATGGTGCAAATTGGTTCCGTGGGAGGGGCACTCTTGAAGTCCCAACTAG
TCTCCACATCATGTTTGCCGGCCTCATCTTCCTCCTCTCCTTCCTCCAAT
ACGAGTCTCCTCGCTTCCTTGTAAAGAAAGGCAAGCCCGAAGAAGCACTG
AAGAACCTTGCGCGCCTCCGCAATCTTCCTCCAGAGCATGAATACGTTGT
CGAGGAGTTCACGGGTATCCAGAATGCCCATCAGGCGGAGATGGAGGCTA
CCATGGGAGCTGGCTGGCTGGGCATTGTCAAGGAGGCCATCATGGTCCCG
AGCAACCTGTACCGGCTGTACCTAGCCGCCATGGCGCAGCTACTGTCCCA
ATGGTCTGGAGCGGGATCCATCACGCTGTACGCGCCGGATCTGTTCAGTC
TCCTGGGCATCACGGGGTCCAACGAGTCCCTACTTGTGACAGCAGTGTTC
GGTATCATCAAGCTGGTCGCAGCTGTGATTTGCGCTCTGTTCCTGGTGGA
TGTGATTGGGCGCAAACGTGCCCTACTCCTAGGAATCACGCTGCAGGCCA
TCTCGATGATCTACGTGGCTAGCTTCCTCACTGCCGTGCCGGAGATGGGC
ATTGTCGATGACTTTGTCCTGCCGGAGTCAAAGAAGGGTAGTAGCCGCGG
AGCCATTGCTATGATCTATATCTCCGGTGTGGGCTGGGCATTGGGCTGGA
ACTCCATGCAGTATCTGCTGACCGCAGAACTGTTCCCGCTACGCATCCGC
GCACTGGCTACCTCTGCTGCTATGACGCTGCACTTTGTCAATCAGTATGG
TAATTCCCGAGCGGTGCCCAATATGTTGCTGGGTACTGCGGAGGGTGGCA
TCACCCCCAAGGGCACGTTCTGGTTCTTCTCTGCCGTGACGGTGCTGGGT
GGGCTGTGGGTGTGGTTCAGTGTGCCTGAGACAGCGGGGCGGAGTCTAGA
GAGTATGGATCGGTTGTTTGCATTGCCCTGGTATCAAATCGGACGGCATG
GCAACCGTGATGCCGACCAGCAGGACCAGGTGGTGGCGGATAAACAACAG
CAGGTGGAGGATGGATTTGGAGGGGCGGAGCATCGCGAGCGGGTGTAAGC
CCCAGCATCCGTCCGCGGGCTCTGCACTTGTGTCTTCACCGGCTTCGTTT
ACCTGGGCATTGTGCTCGCCTACTTCACCAACTACGGCTGCCAGATCCAT
ATGGGCGACCACACTCACAAGCGATGGTGCATTCCTTGTGTGCGACCGTA
TTGGACGGCTGTGGGCGACTCGCCAACTCTGCGTTCTTTGGATCCTGGGA
ATTGCCATTTTCATGGGCGTCGGTGCCAACGGTAGCCTGGGGGCTGTCTA
TGCTGGTCGCTTCGTGGCCGGACTGGGCGTCGGCCAGACTGTAGTTGTGG
GACCAGTCTACCTGGCTGAGATCATGGCAGGTTCCAAGAAACCAGTTAAC
ATTTTTCGCTTGCGCAATCTCGCTGACCCCAAGGAGGTCTTCAACTGGAG
GCTATGGTTTGCCGTGCTCTCCTTTGGCCTCATGGGCGCTGCCCGTGGTG
TTGACGAGGGTTTGATCTCGGGTGCCTTTAACTCCAAGGATTTTCAGCGC
ACTATTCATCTGGACTCGTACAGTGAGGTTGAACAGACCAACATCAAGGC
GAATGTGTCCGCTATGGTGCAAATTGGTTCCGTGGGAGGGGCACTCTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011342KJC3_011342Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011342-T1KJC3_011342-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011342-T1.cdsKJC3_011342-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011342-T1.utr3p1KJC3_011342-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011342-T1.exon4KJC3_011342-T1.exon4Aspergillus niger KJC3exon
KJC3_011342-T1.exon3KJC3_011342-T1.exon3Aspergillus niger KJC3exon
KJC3_011342-T1.exon2KJC3_011342-T1.exon2Aspergillus niger KJC3exon
KJC3_011342-T1.exon1KJC3_011342-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011342-T1.utr5p1KJC3_011342-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:344079..346054 -
Powered by Drupal