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KJC3_011452-T1, KJC3_011452-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011452-T1
Unique NameKJC3_011452-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:688141..689055-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011452-T1 ID=KJC3_011452-T1|Name=KJC3_011452-T1|organism=Aspergillus niger KJC3|type=mRNA|length=915bp|location=Sequence derived from alignment at ch8:688141..689055- (Aspergillus niger KJC3)
CTCCCCGTCACCACTTTCCACACCTTAATCGGACACATTCAATTAACCCA
AAATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTC
GGCCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTGTACGCCAT
CCTATACTTTCCATACCAAACCTTTTTCTATTCATTCCCCTACCAATAAC
AAGTACCAGATGACTGACAATCTGAAATAACTGATATAGTCCCGACTTCA
CAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCACCTTC
TACGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGCAGCG
TCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAGCAGA
AACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGATCCGT
CGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCATTTGT
TTGGCCCGAGGCGCCGACGGATATGGCTCCGTATGTTACCCTCTCTATGT
ATCTGTTTGATATTGTTGTTGTTGTCATTGTTGTTGAAGGATTGGTGGGT
TGTGGAAACAATGCTGACTATATGGGTGTTTGTGTGCAGATGGGAGAAGG
ACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAG
AAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAA
GGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTT
GGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGA
TTTTCTCTTTCTCGTTGATATGCTGGTTTAGAAATTGTTTGTTTGGTATA
TCATTTGTTGGCTGG
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Coding sequence (CDS) from alignment at ch8:688141..689055-

>KJC3_011452-T1 ID=KJC3_011452-T1|Name=KJC3_011452-T1|organism=Aspergillus niger KJC3|type=CDS|length=1773bp|location=Sequence derived from alignment at ch8:688141..689055- (Aspergillus niger KJC3)
ATGGGAGAAGGACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCC
AGGATAAGCAGAAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGG
GAGGTCTATAAGGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTG
GAGGCCGACTTGGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGG
TTAAGTCGTGATCCCGACTTCACAATCGCCCTAATCCGCACGCCCTTCCT
TCCCCCCCGCTACGCCACCTTCTACGTGCCGCTCAACTTCAACAAACTGG
ATATGCGCGATTACCTGCAGCGTCTGTACGGCGTGGGCGTCGTCAGCGTG
CGCTCATTCGTCGAACAGCAGAAACTGACGAGGTTGAAGTCCCTGGGTCG
CTATGGATATGGAAAGATCCGTCGCCCGCAGTCTAAGAAGAAGATGACGG
TCGAGATGAAGGAGGCATTTGTTTGGCCCGAGGCGCCGACGGATATGGCT
CCATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTC
GGCCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTATGGGAGAA
GGACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGC
AGAAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTAT
AAGGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGAC
TTGGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGT
GATCCCGACTTCACAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCG
CTACGCCACCTTCTACGTGCCGCTCAACTTCAACAAACTGGATATGCGCG
ATTACCTGCAGCGTCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTC
GTCGAACAGCAGAAACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATA
TGGAAAGATCCGTCGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGA
AGGAGGCATTTGTTTGGCCCGAGGCGCCGACGGATATGGCTCCATGGTCC
GACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCG
GCGCCTCTCTCCCAACGGAAGCAGATCTTCCTATGGGAGAAGGACCAGTT
CTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGG
ATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGAT
GCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGC
TTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGATCCCGAC
TTCACAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCAC
CTTCTACGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGC
AGCGTCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAG
CAGAAACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGAT
CCGTCGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCAT
TTGTTTGGCCCGAGGCGCCGACGGATATGGCTCCATGGTCCGACGATTCT
CCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGCGCCTCTC
TCCCAACGGAAGCAGATCTTCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011452KJC3_011452Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011452-T1KJC3_011452-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011452-T1.cdsKJC3_011452-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011452-T1.utr3p1KJC3_011452-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011452-T1.exon3KJC3_011452-T1.exon3Aspergillus niger KJC3exon
KJC3_011452-T1.exon2KJC3_011452-T1.exon2Aspergillus niger KJC3exon
KJC3_011452-T1.exon1KJC3_011452-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011452-T1.utr5p1KJC3_011452-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264HX6
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR013025
DBxrefPFAM:PF00276
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:688141..689055 -
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