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KJC3_011643-T1, KJC3_011643-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011643-T1
Unique NameKJC3_011643-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1209648..1210790+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011643-T1 ID=KJC3_011643-T1|Name=KJC3_011643-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1143bp|location=Sequence derived from alignment at ch8:1209648..1210790+ (Aspergillus niger KJC3)
ATCCGCCCGCTTCCACGGTATCGCATCTACAATATCATATTAATATCCAT
TTCCACCATGTTCACCGGTCTCGTTGAGAAGATTGGGAGTGAGTCTCTAA
TCCTGCGACCATGACCACATAAACAGCAAAACTAATCACTCTCCTCTATC
GCAGCGGTCTCGTCCCTCGAGCCTCTCGATACCTCGTCAAGCGGGGGCGG
GGGTACATCATTGACTATCACGGACTGTGAGGAGATCCTCACAGATTGCC
ATCTCGGCGACAGTATAGCCGTCAATGGTATGAACTGCATTGCATGATAC
CAATTGACACACTCACATTCATTCCCATTGCACTTGATCCCTTTTTCCTC
TGCTCTTCCCTCGCCATCGTTGCCCCTCCCCCTTACCCCCACTCCCCCCC
AAAATCTCGAAACAATAACCCCCACCAAACCCCCCCGAAAAGAGAAATCC
ACCAAGCCAACATAATCGCATCAAACCAGGAACCTGCCTTACAGTAACGG
CCTTCGACAAAACCTGGTTCAAGGTCGGCGTCGCCCCCGAAACCCTCCGC
CGCACAAATCTCGGCTCCCTGCAGACCAACTCCCGCGTGAACCTCGAACG
CGCCGTCCTGGGCGAAACGCGCATGGGCGGTCATTTCGTGCAGGGCCACG
TCGACACCATCGCTAAGATCCTCTCCGTGACGCCGGAGGGCAATGCGCTG
GTGTTCCGTATGCAGCCGCGCGATATCGGCGTGATGCGGTATATCGTGGA
GAAGGGATATGTTACGCTGGACGGGGCTAGTTTGACTGTGACGAATGTTG
TGGATGGCCAGGAGGGATATTTTGAGGTGATGCTTATTGCGTACACGCAG
GAGAAGATTGTCACGGCGGCAAAGAAGCCCGGGGATTATGTGAATGTGGA
GATTGATATTGTGGGCAAATATGTTGAGAAGAGTGTGCAGGGGTATTTTG
CTGGTACTGCGGGTGGGGATATGAAGATGTTGGAGAAGATGGTAGAGAGG
ATCGTGGAGGAGAAGTTGAAAAGGTAGGTCCGTGTTGTAATTACTGCATT
AGTAGGTAGGGAAGAGATGACCATGCATGATGTTTACGAGCATTTAGCTA
TATGTGAAATAGTGATATGAATGAAGAAAATTCTTTTGCTTCC
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Coding sequence (CDS) from alignment at ch8:1209648..1210790+

>KJC3_011643-T1 ID=KJC3_011643-T1|Name=KJC3_011643-T1|organism=Aspergillus niger KJC3|type=CDS|length=2106bp|location=Sequence derived from alignment at ch8:1209648..1210790+ (Aspergillus niger KJC3)
ATGTTCACCGGTCTCGTTGAGAAGATTGGGACGGTCTCGTCCCTCGAGCC
TCTCGATACCTCGTCAAGCGGGGGCGGGGGTACATCATTGACTATCACGG
ACTGTGAGGAGATCCTCACAGATTGCCATCTCGGCGACAGTATAGCCGTC
AATGGAACCTGCCTTACAGTAACGGCCTTCGACAAAACCTGGTTCAAGGT
CGGCGTCGCCCCCGAAACCCTCCGCCGCACAAATCTCGGCTCCCTGCAGA
CCAACTCCCGCGTGAACCTCGAACGCGCCGTCCTGGGCGAAACGCGCATG
GGCGGTCATTTCGTGCAGGGCCACGTCGACACCATCGCTAAGATCCTCTC
CGTGACGCCGGAGGGCAATGCGCTGGTGTTCCGTATGCAGCCGCGCGATA
TCGGCGTGATGCGGTATATCGTGGAGAAGGGATATGTTACGCTGGACGGG
GCTAGTTTGACTGTGACGAATGTTGTGGATGGCCAGGAGGGATATTTTGA
GGTGATGCTTATTGCGTACACGCAGGAGAAGATTGTCACGGCGGCAAAGA
AGCCCGGGGATTATGTGAATGTGGAGATTGATATTGTGGGCAAATATGTT
GAGAAGAGTGTGCAGGGGTATTTTGCTGGTACTGCGGGTGGGGATATGAA
GATGTTGGAGAAGATGGTAGAGAGGATCGTGGAGGAGAAGTTGAAAAGGT
AGATGTTCACCGGTCTCGTTGAGAAGATTGGGACGGTCTCGTCCCTCGAG
CCTCTCGATACCTCGTCAAGCGGGGGCGGGGGTACATCATTGACTATCAC
GGACTGTGAGGAGATCCTCACAGATTGCCATCTCGGCGACAGTATAGCCG
TCAATGGAACCTGCCTTACAGTAACGGCCTTCGACAAAACCTGGTTCAAG
GTCGGCGTCGCCCCCGAAACCCTCCGCCGCACAAATCTCGGCTCCCTGCA
GACCAACTCCCGCGTGAACCTCGAACGCGCCGTCCTGGGCGAAACGCGCA
TGGGCGGTCATTTCGTGCAGGGCCACGTCGACACCATCGCTAAGATCCTC
TCCGTGACGCCGGAGGGCAATGCGCTGGTGTTCCGTATGCAGCCGCGCGA
TATCGGCGTGATGCGGTATATCGTGGAGAAGGGATATGTTACGCTGGACG
GGGCTAGTTTGACTGTGACGAATGTTGTGGATGGCCAGGAGGGATATTTT
GAGGTGATGCTTATTGCGTACACGCAGGAGAAGATTGTCACGGCGGCAAA
GAAGCCCGGGGATTATGTGAATGTGGAGATTGATATTGTGGGCAAATATG
TTGAGAAGAGTGTGCAGGGGTATTTTGCTGGTACTGCGGGTGGGGATATG
AAGATGTTGGAGAAGATGGTAGAGAGGATCGTGGAGGAGAAGTTGAAAAG
GTAGATGTTCACCGGTCTCGTTGAGAAGATTGGGACGGTCTCGTCCCTCG
AGCCTCTCGATACCTCGTCAAGCGGGGGCGGGGGTACATCATTGACTATC
ACGGACTGTGAGGAGATCCTCACAGATTGCCATCTCGGCGACAGTATAGC
CGTCAATGGAACCTGCCTTACAGTAACGGCCTTCGACAAAACCTGGTTCA
AGGTCGGCGTCGCCCCCGAAACCCTCCGCCGCACAAATCTCGGCTCCCTG
CAGACCAACTCCCGCGTGAACCTCGAACGCGCCGTCCTGGGCGAAACGCG
CATGGGCGGTCATTTCGTGCAGGGCCACGTCGACACCATCGCTAAGATCC
TCTCCGTGACGCCGGAGGGCAATGCGCTGGTGTTCCGTATGCAGCCGCGC
GATATCGGCGTGATGCGGTATATCGTGGAGAAGGGATATGTTACGCTGGA
CGGGGCTAGTTTGACTGTGACGAATGTTGTGGATGGCCAGGAGGGATATT
TTGAGGTGATGCTTATTGCGTACACGCAGGAGAAGATTGTCACGGCGGCA
AAGAAGCCCGGGGATTATGTGAATGTGGAGATTGATATTGTGGGCAAATA
TGTTGAGAAGAGTGTGCAGGGGTATTTTGCTGGTACTGCGGGTGGGGATA
TGAAGATGTTGGAGAAGATGGTAGAGAGGATCGTGGAGGAGAAGTTGAAA
AGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011643KJC3_011643Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011643-T1KJC3_011643-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011643-T1.utr5p1KJC3_011643-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011643-T1.exon1KJC3_011643-T1.exon1Aspergillus niger KJC3exon
KJC3_011643-T1.exon2KJC3_011643-T1.exon2Aspergillus niger KJC3exon
KJC3_011643-T1.exon3KJC3_011643-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011643-T1.cdsKJC3_011643-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011643-T1.utr3p1KJC3_011643-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017938
DBxrefInterPro:IPR026017
DBxrefInterPro:IPR001783
DBxrefInterPro:IPR023366
DBxrefPFAM:PF00677
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1209648..1210790 +
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