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KJC3_011770-T1, KJC3_011770-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011770-T1
Unique NameKJC3_011770-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1560010..1560442-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011770-T1 ID=KJC3_011770-T1|Name=KJC3_011770-T1|organism=Aspergillus niger KJC3|type=mRNA|length=433bp|location=Sequence derived from alignment at ch8:1560010..1560442- (Aspergillus niger KJC3)
ATGGCTCGGCTATCAGGCCTCCAAAGACAGGTGCTGGCTCTGTATCGGAC
ATGCTTGAGAGAAGCCGGGAAAAAACCCATTGTGAGCAATTACCTCGCCG
CGCTGTCAAAGTTTTGATTCACTGGCCAGCTAGCGAACATGGGCTGATTG
GTTCTGCTACTTCATATACTGTAACTAGGAGACGAGAGAGAACTTTAGAG
CATATGCTAGGTGCGTTCCTTGGTCAGAATTCTGAATTAAAAAACAACTG
GGTTCCAGCCCAATCGTCTCCTGGAATGCCCGCTCTGCCGTGCGCTAATA
TCGAAACAGAGCCGAATTTCGAAAGAACTCCTCTGTCAGCAAGAAGGATT
TCGGTGCGATAGAGTATCTACTACGGAAGGGGCAGAGGCAGCTTGAGATG
TACTCAGCCCCCGGAATCCGCAATATCCGGTGA
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Coding sequence (CDS) from alignment at ch8:1560010..1560442-

>KJC3_011770-T1 ID=KJC3_011770-T1|Name=KJC3_011770-T1|organism=Aspergillus niger KJC3|type=CDS|length=711bp|location=Sequence derived from alignment at ch8:1560010..1560442- (Aspergillus niger KJC3)
AGCCGAATTTCGAAAGAACTCCTCTGTCAGCAAGAAGGATTTCGGTGCGA
TAGAGTATCTACTACGGAAGGGGCAGAGGCAGCTTGAGATGTACTCAGCC
CCCGGAATCCGCAATATCCGGTGAGAGACGAGAGAGAACTTTAGAGCATA
TGCTAGATGGCTCGGCTATCAGGCCTCCAAAGACAGGTGCTGGCTCTGTA
TCGGACATGCTTGAGAGAAGCCGGGAAAAAACCCATTAGCCGAATTTCGA
AAGAACTCCTCTGTCAGCAAGAAGGATTTCGGTGCGATAGAGTATCTACT
ACGGAAGGGGCAGAGGCAGCTTGAGATGTACTCAGCCCCCGGAATCCGCA
ATATCCGGTGAGAGACGAGAGAGAACTTTAGAGCATATGCTAGATGGCTC
GGCTATCAGGCCTCCAAAGACAGGTGCTGGCTCTGTATCGGACATGCTTG
AGAGAAGCCGGGAAAAAACCCATTAGCCGAATTTCGAAAGAACTCCTCTG
TCAGCAAGAAGGATTTCGGTGCGATAGAGTATCTACTACGGAAGGGGCAG
AGGCAGCTTGAGATGTACTCAGCCCCCGGAATCCGCAATATCCGGTGAGA
GACGAGAGAGAACTTTAGAGCATATGCTAGATGGCTCGGCTATCAGGCCT
CCAAAGACAGGTGCTGGCTCTGTATCGGACATGCTTGAGAGAAGCCGGGA
AAAAACCCATT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011770KJC3_011770Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011770-T1KJC3_011770-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011770-T1.cdsKJC3_011770-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011770-T1.exon3KJC3_011770-T1.exon3Aspergillus niger KJC3exon
KJC3_011770-T1.exon2KJC3_011770-T1.exon2Aspergillus niger KJC3exon
KJC3_011770-T1.exon1KJC3_011770-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR008011
DBxrefPFAM:PF13233
DBxrefPFAM:PF05347
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1560010..1560442 -
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