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KJC3_011866-T1, KJC3_011866-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011866-T1
Unique NameKJC3_011866-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1880781..1881741-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011866-T1 ID=KJC3_011866-T1|Name=KJC3_011866-T1|organism=Aspergillus niger KJC3|type=mRNA|length=961bp|location=Sequence derived from alignment at ch8:1880781..1881741- (Aspergillus niger KJC3)
GATAACGATAAGGATGTTGTCACTACTTGCTATCTATCTACTCACCACCA
CATTTCTTCTTTTCTAAACTATATTGTTAAGATCCAATTGCGGTCCTATT
CGCATTATAATGTCTAATTTATAGCTCAAAGGATAGCAAAGGATTATACT
GCCAGTCATGGATCCTCCCCTCAGAATGGATCCCAAGATGGATCCTAAAA
TGGACACCAGGAAGATAAGTGCCCAGCGTCTTCCCCCGCCTGTCCTCTTC
CAGGGCCCGCCGTCACATAATGCCTCCAATCTCTCTCTTCCCCCGCCAGT
ATCTGCTGTTCCGTCGACGGGAGTCTCTCCGCGGCCGCCTCTGCAACGCA
ATCGCTCGTCCCGGGCGGGAACCCTCGAGGCCCCGGGGTCCCTGTCGCCA
TTCCTGACTCGCAAGCAGTCCAAGGGGGAGGTGGATGGCTCCGAGGCCAT
ATGGCAGGAGATGCAGAGCGCATTGTCCGAGGTCGAGCTGAGCGCGGCAA
CGGGCGAACATGTTTTTGGGGAGAAGCACTCCGAGGCGCTGGAAGATCTC
CGGACAAAGCAGCTGAAGCTTGCGCAGGCGTGGGCACGCAGCGAAGCCGG
AGACGAGGTTGTGGAGACAAAAGGTGCTGTTGCCGCTGCTGCTGCTGCCA
CGGCAAAGAGTAATGCGTCGCTGCGACCGGCGTCGCGAAGCACGGCTGGG
CCGGGCGATTCTGCTAATCCTGAGGATGGATCTTCACGGAATCTGGATGA
GGAGACAGAAAAGGATATTCTCCTCGCACGGGAGAGACGGGAGGCTAATG
ATCGATACTTTGACCGGGTTAATAATGGTGTCTTGGATGTGGTGGCTAAG
CTAGAGGAAGTCGCTCAGGCTATGCGCGCGGTGGAAAGAGAGAGCAAAGA
TATCTGGAGCGATACCGATAGCATGAGTGCAACGACGCAGACCACGACTG
ATACTGGGTGA
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Coding sequence (CDS) from alignment at ch8:1880781..1881741-

>KJC3_011866-T1 ID=KJC3_011866-T1|Name=KJC3_011866-T1|organism=Aspergillus niger KJC3|type=CDS|length=804bp|location=Sequence derived from alignment at ch8:1880781..1881741- (Aspergillus niger KJC3)
ATGGATCCTCCCCTCAGAATGGATCCCAAGATGGATCCTAAAATGGACAC
CAGGAAGATAAGTGCCCAGCGTCTTCCCCCGCCTGTCCTCTTCCAGGGCC
CGCCGTCACATAATGCCTCCAATCTCTCTCTTCCCCCGCCAGTATCTGCT
GTTCCGTCGACGGGAGTCTCTCCGCGGCCGCCTCTGCAACGCAATCGCTC
GTCCCGGGCGGGAACCCTCGAGGCCCCGGGGTCCCTGTCGCCATTCCTGA
CTCGCAAGCAGTCCAAGGGGGAGGTGGATGGCTCCGAGGCCATATGGCAG
GAGATGCAGAGCGCATTGTCCGAGGTCGAGCTGAGCGCGGCAACGGGCGA
ACATGTTTTTGGGGAGAAGCACTCCGAGGCGCTGGAAGATCTCCGGACAA
AGCAGCTGAAGCTTGCGCAGGCGTGGGCACGCAGCGAAGCCGGAGACGAG
GTTGTGGAGACAAAAGGTGCTGTTGCCGCTGCTGCTGCTGCCACGGCAAA
GAGTAATGCGTCGCTGCGACCGGCGTCGCGAAGCACGGCTGGGCCGGGCG
ATTCTGCTAATCCTGAGGATGGATCTTCACGGAATCTGGATGAGGAGACA
GAAAAGGATATTCTCCTCGCACGGGAGAGACGGGAGGCTAATGATCGATA
CTTTGACCGGGTTAATAATGGTGTCTTGGATGTGGTGGCTAAGCTAGAGG
AAGTCGCTCAGGCTATGCGCGCGGTGGAAAGAGAGAGCAAAGATATCTGG
AGCGATACCGATAGCATGAGTGCAACGACGCAGACCACGACTGATACTGG
GTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011866KJC3_011866Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011866-T1.cdsKJC3_011866-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011866-T1.exon2KJC3_011866-T1.exon2Aspergillus niger KJC3exon
KJC3_011866-T1.exon1KJC3_011866-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011866-T1.utr5p2KJC3_011866-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011866-T1.utr5p1KJC3_011866-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011866-T1KJC3_011866-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefPFAM:PF17242
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1880781..1881741 -
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