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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1902213..1904929- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011876-T1 ID=KJC3_011876-T1|Name=KJC3_011876-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2717bp|location=Sequence derived from alignment at ch8:1902213..1904929- (Aspergillus niger KJC3)
AGCAGTTCAGTATTCAGGGGTTTAGATTTAAACTGGATTCATTCTCGGCA
CTGAAACATCCCATTAATTGCTTCAACTATACGATCATTCTTGGCATCAT
ATGCATTCCGTTTTCGGTTGGCATTTTGAATCCCCCTCCCCTCTGTCTCC
CCGATGGCAAACCGATCCTTGGATGCAGCAACAGGTGGGAAGCAAAGAGA
TTGCGCGGTCTCCAGATTAATGCTGCCTGATAACTGGTATATTATTATCC
ATGATCCATTTCGCCATCTGCGACTCCAGTGGCGTGCATAGCATACGTAT
CCTACTGTCACCTGTCCTGCAGTTGGCAAACACACACACACACCTCTGCT
CCATACTATCTCTGAGGATCGCTGCATTCGCAACGCCATCCGTTTTCAGA
ACTTAACATTCATTCAACTCACTTTCTATCTATTCCGTGCTTCTCATTAT
GACCGACGCGATAAGGTTCTCCGACTCCGAATCCTTGGATGCTCCTCATC
GCATCCCACTATAATTGGCTTTTTCCACTGTCCGTCCGCGTGGTTCTCCA
CTACTAGCGCTGCCACCAGTGGATCCGCCTTCACCAATTTATCCTGAAAT
GCCAACATGCCTACGAATCTGTCATCCGACTCCAGTCTAGCGCTGCATCC
ACACGAACGTCTGGGGCCCGGCTAACTTCTCTCCCGTCGCTCGTTGGGTG
GCTTCGGTCCATGATTTGCGACTATCCGCGTCATGCTCTGTCCCACCTCC
TAACTGCCCGCCCACTCGCTCTCTCCGTTTGCAGCGTATCGCTTTTTCTC
CGTCACCATGCACGACTTTCTCTTCCTCTGGCAGGCTAGTCTTCCTCCAT
CGACTACTACCTGCCCTGTCGTGCTTCTCAATTTGCCGTAGATGGCCGTG
CTGCTGGTTCTCTGGGCCCTGTGGCCCATACTGGCATCGGCCTTCTCATG
GCATGGCCTCTGGTATGACCTGGGCTTTCTGGGACCTCATCCCACGCTGA
AATATGAGTCCTTTGACCAGGAGTCTCCCGAGGTCAATGTCCTGCGCTGG
GACCCGCGATGTGAAGAGGGCTACGTCTTTCTCAGCCCTCGCGGTCATTC
ATACCCAGACCCGGGGCCGTTGGTCTACGACAACCAGGGCAATCTGGTGT
GGATTGAACGGGAATTCGGCCAGATCATGGACCTCAAGGTCCAACACTAC
ATGGGGGAGGATTATCTGACATTTTGGGCGGGAGACGACGATGGCACGCG
GGGACTCGGCCAATACTACATGGTGGGTAGCTATCTGCATGACTGGCATC
GATCGAAGCTTATCCGTGACAGCTGAATTCCTCCTACGACGTCGTTTACA
TCGTATCCCCCGCCAACGGCCTCACCGGCGACGTGCACGAATTCAAAATC
ACCGACCAGGGCACCGCGCTCATGACCATCTATGACATCTGCGAGGCGGA
CCTTAGCTCCGTGGACGGACCCCAAGACGGCTGGATATACGACGGACTCT
TCCAAGAGATAGACATTGCGACGGGTGAGCTGCTATTCGAATGGCGAGCG
AGCGATTACTACGACATCGACGAATCCTACTACCCCCTCGGCGAAAAGGG
CTCCGCCCCAACAGCCCATGACGCCTACGACTTCTTCCACATCAACAGCA
TCGACAAACACCCCAACGGAAATTACCTTGTGTCGTCCCGCTACATGCAC
ACCGTCACCTGCATCAGCCCCTGGGGCGAGATCCTCTGGGTGCTGGGCGG
GAAACGCAACACCTTCAAGGACATATCCCCGGACAAGTCCGCCACCGGCA
TCACCTGGCAGCATGACGCACGCTGGCAGTCCGACACGATCATCACGCTG
CTTGACAACGGAGCGCACGAGCATTTAAGTACTAGAGACCACACACGCGG
GTTCATGATCGAATTAAACTTCGACGACTGGACAGCCAATACACTGCACG
TCTACGACAGTCCCGGCTCTTTTAGCAGCCACTCCCAGGGCAGCCTGCAG
GTGCTTCCCCAGACGGGCCATGTCTTCATCGGCTGGGGCAAGCCGTCGGC
GTACACCGAGTTCACCGTGGACGGCGAAGTGCTGTGCGACTTCCACTGGG
GGCCGCGCGTCTTCTTCTGGCTGGGATGGATCAAGTCGTACCGCGCGCAA
AAGTTCCACTGGGTGGGCAGGCCGCGAGTGCCACCGGATGTGGCGGTCGA
TGAGGCGGGTGACACGGCATATGTGAGCTGGAACGGGGCGACGGATATTG
CAGGATGGGTGCTGCAGCGGGCGAGTAACTCCAGCGCGGAAGAGGATGAG
TTTGAGAGTGTTGCGTATACGCCGAAAGAGGGATTCGAGACGCAGGTGGA
TTTGATAGGAGAGGGATACTTCCGCTTGATGGCGGTGGATTTGGAGGGGA
ATGAGATGGGAGTGACGAGGGTGTTTGAGGGATGCGTAAGTTACCGCTAC
CCTGGTGACATAAGTACAGTACAGGATGATGCTAACCTGATATGGACAGG
AGATAACTGATATCGACGATGACGGCTCAAGCTCATTCTTTGTATTTTCC
GAACGAGCATTCCAATGGATGCTCGTAGGGACATTTACAGCAGGAGCAGT
GGTAGTAGGAGCATGGAGGGCGAGGAAACGCATACAGTCGATTTTTGTGA
GATATTTTCGTTATTGATTGAATACTAGATACCCATATAGCAATACACAT
ATTCTTTCTATCTTTAA back to topCoding sequence (CDS) from alignment at ch8:1902213..1904929- >KJC3_011876-T1 ID=KJC3_011876-T1|Name=KJC3_011876-T1|organism=Aspergillus niger KJC3|type=CDS|length=4986bp|location=Sequence derived from alignment at ch8:1902213..1904929- (Aspergillus niger KJC3)
GAGATAACTGATATCGACGATGACGGCTCAAGCTCATTCTTTGTATTTTC
CGAACGAGCATTCCAATGGATGCTCGTAGGGACATTTACAGCAGGAGCAG
TGGTAGTAGGAGCATGGAGGGCGAGGAAACGCATACAGTCGATTTTTGTG
AGATATTTTCGTTATTGACTGAATTCCTCCTACGACGTCGTTTACATCGT
ATCCCCCGCCAACGGCCTCACCGGCGACGTGCACGAATTCAAAATCACCG
ACCAGGGCACCGCGCTCATGACCATCTATGACATCTGCGAGGCGGACCTT
AGCTCCGTGGACGGACCCCAAGACGGCTGGATATACGACGGACTCTTCCA
AGAGATAGACATTGCGACGGGTGAGCTGCTATTCGAATGGCGAGCGAGCG
ATTACTACGACATCGACGAATCCTACTACCCCCTCGGCGAAAAGGGCTCC
GCCCCAACAGCCCATGACGCCTACGACTTCTTCCACATCAACAGCATCGA
CAAACACCCCAACGGAAATTACCTTGTGTCGTCCCGCTACATGCACACCG
TCACCTGCATCAGCCCCTGGGGCGAGATCCTCTGGGTGCTGGGCGGGAAA
CGCAACACCTTCAAGGACATATCCCCGGACAAGTCCGCCACCGGCATCAC
CTGGCAGCATGACGCACGCTGGCAGTCCGACACGATCATCACGCTGCTTG
ACAACGGAGCGCACGAGCATTTAAGTACTAGAGACCACACACGCGGGTTC
ATGATCGAATTAAACTTCGACGACTGGACAGCCAATACACTGCACGTCTA
CGACAGTCCCGGCTCTTTTAGCAGCCACTCCCAGGGCAGCCTGCAGGTGC
TTCCCCAGACGGGCCATGTCTTCATCGGCTGGGGCAAGCCGTCGGCGTAC
ACCGAGTTCACCGTGGACGGCGAAGTGCTGTGCGACTTCCACTGGGGGCC
GCGCGTCTTCTTCTGGCTGGGATGGATCAAGTCGTACCGCGCGCAAAAGT
TCCACTGGGTGGGCAGGCCGCGAGTGCCACCGGATGTGGCGGTCGATGAG
GCGGGTGACACGGCATATGTGAGCTGGAACGGGGCGACGGATATTGCAGG
ATGGGTGCTGCAGCGGGCGAGTAACTCCAGCGCGGAAGAGGATGAGTTTG
AGAGTGTTGCGTATACGCCGAAAGAGGGATTCGAGACGCAGGTGGATTTG
ATAGGAGAGGGATACTTCCGCTTGATGGCGGTGGATTTGGAGGGGAATGA
GATGGGAGTGACGAGGGTGTTTGAGGGATGCATGGCCGTGCTGCTGGTTC
TCTGGGCCCTGTGGCCCATACTGGCATCGGCCTTCTCATGGCATGGCCTC
TGGTATGACCTGGGCTTTCTGGGACCTCATCCCACGCTGAAATATGAGTC
CTTTGACCAGGAGTCTCCCGAGGTCAATGTCCTGCGCTGGGACCCGCGAT
GTGAAGAGGGCTACGTCTTTCTCAGCCCTCGCGGTCATTCATACCCAGAC
CCGGGGCCGTTGGTCTACGACAACCAGGGCAATCTGGTGTGGATTGAACG
GGAATTCGGCCAGATCATGGACCTCAAGGTCCAACACTACATGGGGGAGG
ATTATCTGACATTTTGGGCGGGAGACGACGATGGCACGCGGGGACTCGGC
CAATACTACATGGAGATAACTGATATCGACGATGACGGCTCAAGCTCATT
CTTTGTATTTTCCGAACGAGCATTCCAATGGATGCTCGTAGGGACATTTA
CAGCAGGAGCAGTGGTAGTAGGAGCATGGAGGGCGAGGAAACGCATACAG
TCGATTTTTGTGAGATATTTTCGTTATTGACTGAATTCCTCCTACGACGT
CGTTTACATCGTATCCCCCGCCAACGGCCTCACCGGCGACGTGCACGAAT
TCAAAATCACCGACCAGGGCACCGCGCTCATGACCATCTATGACATCTGC
GAGGCGGACCTTAGCTCCGTGGACGGACCCCAAGACGGCTGGATATACGA
CGGACTCTTCCAAGAGATAGACATTGCGACGGGTGAGCTGCTATTCGAAT
GGCGAGCGAGCGATTACTACGACATCGACGAATCCTACTACCCCCTCGGC
GAAAAGGGCTCCGCCCCAACAGCCCATGACGCCTACGACTTCTTCCACAT
CAACAGCATCGACAAACACCCCAACGGAAATTACCTTGTGTCGTCCCGCT
ACATGCACACCGTCACCTGCATCAGCCCCTGGGGCGAGATCCTCTGGGTG
CTGGGCGGGAAACGCAACACCTTCAAGGACATATCCCCGGACAAGTCCGC
CACCGGCATCACCTGGCAGCATGACGCACGCTGGCAGTCCGACACGATCA
TCACGCTGCTTGACAACGGAGCGCACGAGCATTTAAGTACTAGAGACCAC
ACACGCGGGTTCATGATCGAATTAAACTTCGACGACTGGACAGCCAATAC
ACTGCACGTCTACGACAGTCCCGGCTCTTTTAGCAGCCACTCCCAGGGCA
GCCTGCAGGTGCTTCCCCAGACGGGCCATGTCTTCATCGGCTGGGGCAAG
CCGTCGGCGTACACCGAGTTCACCGTGGACGGCGAAGTGCTGTGCGACTT
CCACTGGGGGCCGCGCGTCTTCTTCTGGCTGGGATGGATCAAGTCGTACC
GCGCGCAAAAGTTCCACTGGGTGGGCAGGCCGCGAGTGCCACCGGATGTG
GCGGTCGATGAGGCGGGTGACACGGCATATGTGAGCTGGAACGGGGCGAC
GGATATTGCAGGATGGGTGCTGCAGCGGGCGAGTAACTCCAGCGCGGAAG
AGGATGAGTTTGAGAGTGTTGCGTATACGCCGAAAGAGGGATTCGAGACG
CAGGTGGATTTGATAGGAGAGGGATACTTCCGCTTGATGGCGGTGGATTT
GGAGGGGAATGAGATGGGAGTGACGAGGGTGTTTGAGGGATGCATGGCCG
TGCTGCTGGTTCTCTGGGCCCTGTGGCCCATACTGGCATCGGCCTTCTCA
TGGCATGGCCTCTGGTATGACCTGGGCTTTCTGGGACCTCATCCCACGCT
GAAATATGAGTCCTTTGACCAGGAGTCTCCCGAGGTCAATGTCCTGCGCT
GGGACCCGCGATGTGAAGAGGGCTACGTCTTTCTCAGCCCTCGCGGTCAT
TCATACCCAGACCCGGGGCCGTTGGTCTACGACAACCAGGGCAATCTGGT
GTGGATTGAACGGGAATTCGGCCAGATCATGGACCTCAAGGTCCAACACT
ACATGGGGGAGGATTATCTGACATTTTGGGCGGGAGACGACGATGGCACG
CGGGGACTCGGCCAATACTACATGGAGATAACTGATATCGACGATGACGG
CTCAAGCTCATTCTTTGTATTTTCCGAACGAGCATTCCAATGGATGCTCG
TAGGGACATTTACAGCAGGAGCAGTGGTAGTAGGAGCATGGAGGGCGAGG
AAACGCATACAGTCGATTTTTGTGAGATATTTTCGTTATTGACTGAATTC
CTCCTACGACGTCGTTTACATCGTATCCCCCGCCAACGGCCTCACCGGCG
ACGTGCACGAATTCAAAATCACCGACCAGGGCACCGCGCTCATGACCATC
TATGACATCTGCGAGGCGGACCTTAGCTCCGTGGACGGACCCCAAGACGG
CTGGATATACGACGGACTCTTCCAAGAGATAGACATTGCGACGGGTGAGC
TGCTATTCGAATGGCGAGCGAGCGATTACTACGACATCGACGAATCCTAC
TACCCCCTCGGCGAAAAGGGCTCCGCCCCAACAGCCCATGACGCCTACGA
CTTCTTCCACATCAACAGCATCGACAAACACCCCAACGGAAATTACCTTG
TGTCGTCCCGCTACATGCACACCGTCACCTGCATCAGCCCCTGGGGCGAG
ATCCTCTGGGTGCTGGGCGGGAAACGCAACACCTTCAAGGACATATCCCC
GGACAAGTCCGCCACCGGCATCACCTGGCAGCATGACGCACGCTGGCAGT
CCGACACGATCATCACGCTGCTTGACAACGGAGCGCACGAGCATTTAAGT
ACTAGAGACCACACACGCGGGTTCATGATCGAATTAAACTTCGACGACTG
GACAGCCAATACACTGCACGTCTACGACAGTCCCGGCTCTTTTAGCAGCC
ACTCCCAGGGCAGCCTGCAGGTGCTTCCCCAGACGGGCCATGTCTTCATC
GGCTGGGGCAAGCCGTCGGCGTACACCGAGTTCACCGTGGACGGCGAAGT
GCTGTGCGACTTCCACTGGGGGCCGCGCGTCTTCTTCTGGCTGGGATGGA
TCAAGTCGTACCGCGCGCAAAAGTTCCACTGGGTGGGCAGGCCGCGAGTG
CCACCGGATGTGGCGGTCGATGAGGCGGGTGACACGGCATATGTGAGCTG
GAACGGGGCGACGGATATTGCAGGATGGGTGCTGCAGCGGGCGAGTAACT
CCAGCGCGGAAGAGGATGAGTTTGAGAGTGTTGCGTATACGCCGAAAGAG
GGATTCGAGACGCAGGTGGATTTGATAGGAGAGGGATACTTCCGCTTGAT
GGCGGTGGATTTGGAGGGGAATGAGATGGGAGTGACGAGGGTGTTTGAGG
GATGCATGGCCGTGCTGCTGGTTCTCTGGGCCCTGTGGCCCATACTGGCA
TCGGCCTTCTCATGGCATGGCCTCTGGTATGACCTGGGCTTTCTGGGACC
TCATCCCACGCTGAAATATGAGTCCTTTGACCAGGAGTCTCCCGAGGTCA
ATGTCCTGCGCTGGGACCCGCGATGTGAAGAGGGCTACGTCTTTCTCAGC
CCTCGCGGTCATTCATACCCAGACCCGGGGCCGTTGGTCTACGACAACCA
GGGCAATCTGGTGTGGATTGAACGGGAATTCGGCCAGATCATGGACCTCA
AGGTCCAACACTACATGGGGGAGGATTATCTGACATTTTGGGCGGGAGAC
GACGATGGCACGCGGGGACTCGGCCAATACTACATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011876-T1.utr3p1 | KJC3_011876-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011876-T1.utr5p1 | KJC3_011876-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| DBxref | InterPro:IPR039535 |
| DBxref | PFAM:PF14269 |
| DBxref | PFAM:PF05935 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1902213..1904929 - |
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