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KJC3_011910-T1, KJC3_011910-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011910-T1
Unique NameKJC3_011910-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1998239..2001316+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011910-T1 ID=KJC3_011910-T1|Name=KJC3_011910-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3078bp|location=Sequence derived from alignment at ch8:1998239..2001316+ (Aspergillus niger KJC3)
GGTGCTGGAAAGCAATCATCCCCGATCATTATCGCGACACCCGTGGGTAA
AGAGGCTCCCCCATTTTTGACCACCACTGTCAATCACCTTTTGGTGTCTC
GGAGATATCAGTTCCTGCAAGCTTTGGTATGTGACCGTATTCGACCCTTT
CCCCATCTCTTTGACTGGTAGTAGTGGTGGTGGTGGTGGTGGTGGTGTTC
TGGCTACGTGCCTTGTTCTGCCTACACTCATCGCGACCACCTGCTCAACG
CCCACCCACACACACACCCACACCCACACATCCCCCCCCTCCTCTGGCTT
CCCCTCTCGTCTTTTTCTCGACCTCCTCCTTCCATCTTCCCAAGTCAGAT
GACGACTGGCTAATCTTGCAGCCTGTGTAGAGCCGATCTCTGTCTTGAAA
TTAGGGTGGCCCCAGCGTTACGCCAGCTACCATCCTCGCTCTCCCAACTC
CCATTATCGTCATCGTCATCGTCATCATCTTGCAGCTTCCTCCACCCTCC
CTCTAATTCTCCGGCCGGTGCAGCTCCTCTCCCGGCTGGGTAATTGGCCA
TTCGATCTCTGCATTCCTTGCGCCAGGGTGGGAGACTAAACCCCCGATTT
ACTGCTCGTGGGACACACTGGGTTATTAGAACTGTTACATCGGCCGTTCG
GAGATACTGTTTCAGTCTACGCTACTGCTAGGAGCACTCGCAATTTCCTC
CTCTAAGAATAGGCCGATTACCTCCAGGAGGCGGAATCCCCTTTGGTGAG
AGGTTACTATCGATAACACGACTTTTACGAATCGGGCAAGAGGGCGATCA
CAAGCTTATCAGCTTCACTCTGAGAAGAGACCAGTGGACCACCAACGTCC
GAAGTTTCTATTAGCGGACGCTAGGTTTGTCCCGTGCCCAAGCTCCTCGG
GAGTCTAGTCCGGTTGCGCAACAGTCATCTGGCCCGCTTTAGTTCGATCC
TATCACCGCCTGTTTCTCTCTCGCCGTCGTCTTCCTCCCCCCCTCCATCA
TTGATATCTGCAGATCATCTGCACGCACATATTGGTTTCCGTCGTGCATA
GTCCCTGCAGAGCCTTTCTCACCTTGTCACCGCAGTGTCGCTTTTCCACT
GGTCGACTGGCACTCTACACCAACCCCGGTAGCAACATTGTCCGAAGGCA
AATCTCTTGCTTTCATTTCATTTCACCCTGCTCCTCTTCCACTAGGGTGT
AACTAGACCCGGCACAGAAGCGAATAGCAATCATGGCTACCAATTCATTC
CGCGATACGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCTC
CACCCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTCTT
GGAATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATGAA
GCTCCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATAC
TTTCTTTGCCTGTAAGTCCTCCGAACGCATGACCGATTTTCCGTAAAGAT
GCTTTCTTCCTTGATTTGCTGCACTGCCCAGTCCAGGTGACAGAGACTCA
GTTCCTGCATCTGTCCGGGTTCCACGGAAGCCCTAGGAAAAGCTGAGTGA
TGTACTCTCCTCTCTATCTACCTATGGGACTATTCTTTGTCATCTACCGT
TTAATTTTCCTATTTTCCATTTTTCGTTTCTTTTTCTTTTTTTCTGCGCT
TCTACGCATTTTCTATTTTTCTTCTTGCCGCCCTACCTCCTCCTCTTTTA
ACTTTTGGCTAATGCTAATCATACATTCCCTTTACAGTAAGTCGATGGGA
TCGGATGCTCATTTTCATCGCATGCAACCTTGGTGCTGCCGTTTGCTTCC
TTCTTTGCTTTTTCCTATTCCCGGTTCTATCGCTGAAACCCCGCAAATTT
GCCATCCTGTAAGTTACTCTACAGATTCCCCGTCGATCTTCATCGAACCC
CAATACATCCCCTACTTCGCCCACCCACCGGGGAGGGAGGCACGAGGCGG
TGGAGTGCTTGTCATGCCCTCCTCACTGGGGACTATGCACCACGCGTCTC
CGATCCGACTACATTCCAGCGTCTGTGCTGAACCCCCCATCACGCCTCAC
CCATACTGTTTGCCAAGAAACTTCTTGTGAATCTGTGGCTGACCGAACCG
GTTTTACCTCTTGAACTAGGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTA
TCATGGGCAGTCCTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTC
GGGACCACGTCTGCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGA
CTTTGTACTTTGCTATCGGAGTAAGTACCCCTGTTTGTTTGGCTCTAGCT
ACATTTCCCAGGATCTTCCCTGCCAGACCATGTTGTCTATGCCTGTACTA
TCTGAGCGTACGCCTCTGCGATCGCATACCAACCTGTCGATTTCGAGGAT
CTTGCATACCTGGGGCGTGCGCGTACACTCGGAGCCTTCAGCCGACGAAA
TGACATCATAATGCACCGCCACCCCGGTCGTGGATATGATCTCTCACATC
GTCCTGCAACAGTAGCAGGTTGGATGTGCATGCGCTACTGTAGACCCCAG
TCGGGCCCGTGCACATAAGAAAACCAGCGGGAATACCGGTCGCTAACCGT
CTCTGTCCTCTCTAGCTTCATTCAACCCTGTTGACGCTCATCTCGTCGGT
GTTTCAGCTGGCTGCCCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGG
GTAGCACTGGACTGCAGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACT
TCGTGGATGACCAGCTGATACTGTTGAAGCCTCGCTACAACCGGAGACCG
GACTATCTTGCTCTACCCTGCCCCTCCTCTTGGGACGCGCATACATTGTA
TACTTTTTATTTGATCGCATGGTCATTACGATAGACATGGGTTCAACGGC
CGGTATACGCTTGCTTGTACAGCTCTTACCTTTTCCCTTCTTAATATATA
CCAGACAGCGAATACATTAGTCAGAGTTTAGCTTTATATAGTTAGGTTGT
ATAATAAATATTGAGCTGTCTATATTGA
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Coding sequence (CDS) from alignment at ch8:1998239..2001316+

>KJC3_011910-T1 ID=KJC3_011910-T1|Name=KJC3_011910-T1|organism=Aspergillus niger KJC3|type=CDS|length=2052bp|location=Sequence derived from alignment at ch8:1998239..2001316+ (Aspergillus niger KJC3)
ATGGCTACCAATTCATTCCGCGATACGGTCAACTCCTTGGGTTGGTCGCG
ACGAGACCCAGATCTCTCCACCCGCACCAACTCGTCGAATACGCCATTCC
TCTCACGGTTACAGTCTTGGAATCCATTTGGTCAAGGGGAGGGCTATCTG
CAACTACCTACTCATGAAGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCG
CCGAGAGGAGGAAGATACTTTCTTTGCCTTAAGTCGATGGGATCGGATGC
TCATTTTCATCGCATGCAACCTTGGTGCTGCCGTTTGCTTCCTTCTTTGC
TTTTTCCTATTCCCGGTTCTATCGCTGAAACCCCGCAAATTTGCCATCCT
GTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCATGGGCAGTCCTCATGG
GACCCTGGGTCTACGCGAAACATCTGGTCTCGGGACCACGTCTGCCCTTC
ACGGCGGCCTATTTCGGCTCGATCGCCATGACTTTGTACTTTGCTATCGG
AGTAAGTACCCCTGTTTGTTTGGCTCTAGCTACATTTCCCAGGATCTTCC
CTGCCAGACCATGTTGTCTATGCCTGTACTATCTGAGCGTACGCCTCTGC
GATCGCATACCAACCTGTCGATTTCGAGGATCTTGCATACCTGGGGCGTG
CGCGTACACTCGGAGCCTTCAGCCGACGAAATGAATGGCTACCAATTCAT
TCCGCGATACGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTC
TCCACCCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTC
TTGGAATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATG
AAGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGAT
ACTTTCTTTGCCTTAAGTCGATGGGATCGGATGCTCATTTTCATCGCATG
CAACCTTGGTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGG
TTCTATCGCTGAAACCCCGCAAATTTGCCATCCTGTGGTCGGTTGGTTCC
TTGCTCTTTCTCCTATCATGGGCAGTCCTCATGGGACCCTGGGTCTACGC
GAAACATCTGGTCTCGGGACCACGTCTGCCCTTCACGGCGGCCTATTTCG
GCTCGATCGCCATGACTTTGTACTTTGCTATCGGAGTAAGTACCCCTGTT
TGTTTGGCTCTAGCTACATTTCCCAGGATCTTCCCTGCCAGACCATGTTG
TCTATGCCTGTACTATCTGAGCGTACGCCTCTGCGATCGCATACCAACCT
GTCGATTTCGAGGATCTTGCATACCTGGGGCGTGCGCGTACACTCGGAGC
CTTCAGCCGACGAAATGAATGGCTACCAATTCATTCCGCGATACGGTCAA
CTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCTCCACCCGCACCAACT
CGTCGAATACGCCATTCCTCTCACGGTTACAGTCTTGGAATCCATTTGGT
CAAGGGGAGGGCTATCTGCAACTACCTACTCATGAAGCTCCAGGAGCTCC
CCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATACTTTCTTTGCCTTAA
GTCGATGGGATCGGATGCTCATTTTCATCGCATGCAACCTTGGTGCTGCC
GTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGTTCTATCGCTGAAACC
CCGCAAATTTGCCATCCTGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTAT
CATGGGCAGTCCTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTCG
GGACCACGTCTGCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGAC
TTTGTACTTTGCTATCGGAGTAAGTACCCCTGTTTGTTTGGCTCTAGCTA
CATTTCCCAGGATCTTCCCTGCCAGACCATGTTGTCTATGCCTGTACTAT
CTGAGCGTACGCCTCTGCGATCGCATACCAACCTGTCGATTTCGAGGATC
TTGCATACCTGGGGCGTGCGCGTACACTCGGAGCCTTCAGCCGACGAAAT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011910KJC3_011910Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011910-T1KJC3_011910-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011910-T1.utr5p1KJC3_011910-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_011910-T1.utr5p2KJC3_011910-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011910-T1.exon1KJC3_011910-T1.exon1Aspergillus niger KJC3exon
KJC3_011910-T1.exon2KJC3_011910-T1.exon2Aspergillus niger KJC3exon
KJC3_011910-T1.exon3KJC3_011910-T1.exon3Aspergillus niger KJC3exon
KJC3_011910-T1.exon4KJC3_011910-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011910-T1.cdsKJC3_011910-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011910-T1.utr3p1KJC3_011910-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007305
DBxrefPFAM:PF04178
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1998239..2001316 +
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