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KJC3_011942-T1, KJC3_011942-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011942-T1
Unique NameKJC3_011942-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2078453..2080415+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011942-T1 ID=KJC3_011942-T1|Name=KJC3_011942-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1963bp|location=Sequence derived from alignment at ch8:2078453..2080415+ (Aspergillus niger KJC3)
GAGCACGTGGCGCTGGATCACATGCCGCACCGCCACCCCGGGCTGCTCCG
TCATCAGGCCAGGTCCCTCCGTCATCCCCTTATCTCTCTTCCATCTACCA
TCATCCTAGGATGGTTATTCCATCTGAGAAACATCTATAAGTTCTTCCAT
TCGATTGCAGTCAGGATGCCGCCTTCTAACGGGCACCTGCTGCTCCCCAA
GTTCTGGAGAGCAGCCAGGTGAGTCATTCGCCACTCGGATATACTTCATT
CCGCTAACGGCCTGCAGGTCTGCCTACGAGAAGGCCTATAAGACTATCAA
GTCTAGGTTCCCAGAGCAATTCCAACAAAGCTCACTCCGCCTTCAGCCTG
AGTATGTGCGTGTAGTCAACAGACACCCTATCAATCGGGCCGCTGCTATC
CGTCAAGCTCGTGGTCGCCACTACTATTCCACCCGGGCAGCAAGCTCCTT
CATCTCCTACATTCGCAGTGGCCTCCAGGGCGACCGTACTGCCTACAAGA
CATCTCGCGTCGCAACTAATGTCAGTCGCTTGACCAAACATGCTCCTTTC
GCCTCAACCCTTCGTCCGAATCTGACGGGCGGCACCCTGGGTCGCACAGC
GGGTGGCTATGCAATTGGCGCCGGCCGTATCGGTGGGGCACGATACTTTT
CCCATGGCGCAGCTGCCCCTGCCCAGGTCATCAATAATGTCTCTGTCGGT
GTCCGGGCGTTCTTCCTCTCAGGACAGAAGGCTCGGTTTGATGGGATTGA
TCCAATCACCGGCAACAAGCGGTTCAAAGCTGTGAGCAAGCTTCAAGATG
AGGCTGAGCGCAAGATGGCTGCAATTCCTCGCACAGCTCCCGGCTCCTTT
GTCGACTTCCAGATTTCCCCCACAATCACCGCTTTCGGCCTGCAGAAGAA
CCTGGTGGCGACTGGCGCTGGGGATGCCCAGACCATCAACTCGGACGGTC
TCCTCGATTTCTTGTCCGTGGACTTTGCCCGTGCCCTCAAGGATCTCGCT
GCTGTGCTCAATGACCTGAAGAGGCTATCTACACTGGGTGACCTGCCTAT
TCTTTTACATGATCAATCGACGATTAGAGTGCGGTTCCCTGGTTGCGATG
CTAGTACTGTTGAACGTCTCTGTGACGAGGCTGGGGTCAAGAGGGGCAAG
ATAGTGCAGGATGAGGACTTCGACATTCGTACAGGTGCCGACCTCGCTCT
CTTGTTTCCCTTTGCCCCTAGTGTCCCGGCTTCTCCTGACGTAAATGAGT
ACTTCTATCGCTCTGGGACCCTGAAGTCACAGACTCCTGAGGAGGTTGAC
TGGCATGCCATGATGTCCCCAGAGGATGTGTCTGAAGCATCTCCCGAACC
CTACAAGCAGCCCTTCAATCAGCTCAGTTTTGAGGATGTTGCTATGTTTG
GTGAGAACCCTTGGATGTCTTCTCCATCAGGATATTCCAGCATCAATGTC
AGCGAACTTGGCGATCGCGCCTTCTTTGCTGAAGTCGCAAGCATTGGTGT
ACCTGAGAGTGCCTCCGAGTACGACGGATCGGATGGAATACGCAAATTTA
TAGCAGAGTGTGATCTTGCTTCGCGACATTATGGGCAGGCTTTCTAGCCC
GCTACACTTGAACATACCGACTTTGACAGTCATTTATTTCCTATTGTTGT
GATTCTATTTGAAGCATATAATCCATTATTCTCAACACAAAGTGCCTGAT
GATGACAACAAACGAAAATGATAAAAAAAGATTGATCAATAGCTTTCTGT
TGAAGAGGCCTACATATATCCCAACAATCATTACTTCGTATTTAGGAGAG
AATTAGTTCAACTAATTTTGATCTTTTTTCCTTGGACTTTCCTGAAAATA
TGACCAATCTTCCTACAATGGATTGCCTCACCGTTCTAATGGAGATTCGG
ACCGTTAGACCGGATAGCTATATCTTTGATTAAGCCAATTTGATGCCAAA
TGCAACCGAACTT
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Coding sequence (CDS) from alignment at ch8:2078453..2080415+

>KJC3_011942-T1 ID=KJC3_011942-T1|Name=KJC3_011942-T1|organism=Aspergillus niger KJC3|type=CDS|length=3054bp|location=Sequence derived from alignment at ch8:2078453..2080415+ (Aspergillus niger KJC3)
ATGCCGCACCGCCACCCCGGGCTGCTCCGTCATCAGGCCAGGTCCCTCCG
TCATCCCCTTATCTCTCTTCCATCTACCATCATCCTAGGATGGTTATTCC
ATCTGAGAAACATCTATAAGTTCTTCCATTCGATTGCAGTCAGGATGCCG
CCTTCTAACGGGCACCTGCTGCTCCCCAAGTTCTGGAGAGCAGCCAGGTC
TGCCTACGAGAAGGCCTATAAGACTATCAAGTCTAGGTTCCCAGAGCAAT
TCCAACAAAGCTCACTCCGCCTTCAGCCTGAGTATGTGCGTGTAGTCAAC
AGACACCCTATCAATCGGGCCGCTGCTATCCGTCAAGCTCGTGGTCGCCA
CTACTATTCCACCCGGGCAGCAAGCTCCTTCATCTCCTACATTCGCAGTG
GCCTCCAGGGCGACCGTACTGCCTACAAGACATCTCGCGTCGCAACTAAT
GTCAGTCGCTTGACCAAACATGCTCCTTTCGCCTCAACCCTTCGTCCGAA
TCTGACGGGCGGCACCCTGGGTCGCACAGCGGGTGGCTATGCAATTGGCG
CCGGCCGTATCGGTGGGGCACGATACTTTTCCCATGGCGCAGCTGCCCCT
GCCCAGGTCATCAATAATGTCTCTGTCGGTGTCCGGGCGTTCTTCCTCTC
AGGACAGAAGGCTCGGTTTGATGGGATTGATCCAATCACCGGCAACAAGC
GGTTCAAAGCTGTGAGCAAGCTTCAAGATGAGGCTGAGCGCAAGATGGCT
GCAATTCCTCGCACAGCTCCCGGCTCCTTTGTCGACTTCCAGATTTCCCC
CACAATCACCGCTTTCGGCCTGCAGAAGAACCTGGTGGCGACTGGCGCTG
GGGATGCCCAGACCATCAACTCGGACGGTCTCCTCGATTTCTTGTCCGTG
GACTTTGCCCGTGCCCTCAAGGATCTCGCTGCTGTGCTCAATGACCTGAA
GAGGCTATCTACACTGGGTGACCTGCCTATTCTTTTACATGATCAATCGA
CGATTAGAGTGCGGTTCCCTGGTTGCGATGCTAGTACTGTTGAACGTCTC
TGTGACGAGGCTGGGGTCAAGAGGGGCAAGATAGTGCAGGATGAGGACTT
CGACATTCGTACAGGTGCCGACCTCGCTCTCTTGTTTCCCTTTGCCCCTA
GTGTCCCGGCTTCTCCTGACGTAAATGAGTACTTCTATCGCTCTGGGACC
CTGAAGTCACAGACTCCTGAGGAGGTTGACTGGCATGCCATGATGTCCCC
AGAGGATGTGTCTGAAGCATCTCCCGAACCCTACAAGCAGCCCTTCAATC
AGCTCAGTTTTGAGGATGTTGCTATGTTTGGTGAGAACCCTTGGATGTCT
TCTCCATCAGGATATTCCAGCATCAATGTCAGCGAACTTGGCGATCGCGC
CTTCTTTGCTGAAGTCGCAAGCATTGGTGTACCTGAGAGTGCCTCCGAGT
ACGACGGATCGGATGGAATACGCAAATTTATAGCAGAGTGTGATCTTGCT
TCGCGACATTATGGGCAGGCTTTCTAGATGCCGCACCGCCACCCCGGGCT
GCTCCGTCATCAGGCCAGGTCCCTCCGTCATCCCCTTATCTCTCTTCCAT
CTACCATCATCCTAGGATGGTTATTCCATCTGAGAAACATCTATAAGTTC
TTCCATTCGATTGCAGTCAGGATGCCGCCTTCTAACGGGCACCTGCTGCT
CCCCAAGTTCTGGAGAGCAGCCAGGTCTGCCTACGAGAAGGCCTATAAGA
CTATCAAGTCTAGGTTCCCAGAGCAATTCCAACAAAGCTCACTCCGCCTT
CAGCCTGAGTATGTGCGTGTAGTCAACAGACACCCTATCAATCGGGCCGC
TGCTATCCGTCAAGCTCGTGGTCGCCACTACTATTCCACCCGGGCAGCAA
GCTCCTTCATCTCCTACATTCGCAGTGGCCTCCAGGGCGACCGTACTGCC
TACAAGACATCTCGCGTCGCAACTAATGTCAGTCGCTTGACCAAACATGC
TCCTTTCGCCTCAACCCTTCGTCCGAATCTGACGGGCGGCACCCTGGGTC
GCACAGCGGGTGGCTATGCAATTGGCGCCGGCCGTATCGGTGGGGCACGA
TACTTTTCCCATGGCGCAGCTGCCCCTGCCCAGGTCATCAATAATGTCTC
TGTCGGTGTCCGGGCGTTCTTCCTCTCAGGACAGAAGGCTCGGTTTGATG
GGATTGATCCAATCACCGGCAACAAGCGGTTCAAAGCTGTGAGCAAGCTT
CAAGATGAGGCTGAGCGCAAGATGGCTGCAATTCCTCGCACAGCTCCCGG
CTCCTTTGTCGACTTCCAGATTTCCCCCACAATCACCGCTTTCGGCCTGC
AGAAGAACCTGGTGGCGACTGGCGCTGGGGATGCCCAGACCATCAACTCG
GACGGTCTCCTCGATTTCTTGTCCGTGGACTTTGCCCGTGCCCTCAAGGA
TCTCGCTGCTGTGCTCAATGACCTGAAGAGGCTATCTACACTGGGTGACC
TGCCTATTCTTTTACATGATCAATCGACGATTAGAGTGCGGTTCCCTGGT
TGCGATGCTAGTACTGTTGAACGTCTCTGTGACGAGGCTGGGGTCAAGAG
GGGCAAGATAGTGCAGGATGAGGACTTCGACATTCGTACAGGTGCCGACC
TCGCTCTCTTGTTTCCCTTTGCCCCTAGTGTCCCGGCTTCTCCTGACGTA
AATGAGTACTTCTATCGCTCTGGGACCCTGAAGTCACAGACTCCTGAGGA
GGTTGACTGGCATGCCATGATGTCCCCAGAGGATGTGTCTGAAGCATCTC
CCGAACCCTACAAGCAGCCCTTCAATCAGCTCAGTTTTGAGGATGTTGCT
ATGTTTGGTGAGAACCCTTGGATGTCTTCTCCATCAGGATATTCCAGCAT
CAATGTCAGCGAACTTGGCGATCGCGCCTTCTTTGCTGAAGTCGCAAGCA
TTGGTGTACCTGAGAGTGCCTCCGAGTACGACGGATCGGATGGAATACGC
AAATTTATAGCAGAGTGTGATCTTGCTTCGCGACATTATGGGCAGGCTTT
CTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011942KJC3_011942Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011942-T1.utr5p1KJC3_011942-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011942-T1.exon1KJC3_011942-T1.exon1Aspergillus niger KJC3exon
KJC3_011942-T1.exon2KJC3_011942-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011942-T1.cdsKJC3_011942-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011942-T1.utr3p1KJC3_011942-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011942-T1KJC3_011942-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2078453..2080415 +
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