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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2248857..2251475+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011994-T1 ID=KJC3_011994-T1|Name=KJC3_011994-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2619bp|location=Sequence derived from alignment at ch8:2248857..2251475+ (Aspergillus niger KJC3)
CAAAAGAGCAAGCTAACCCGCGGGCGGCGTATCAATTTATATTTTTTTAT
TCTGTCTGATCCCCCGCTAGAGAAGTTTTCCTTTTCAAGGGTATAGCTTC
CTTTTTCTACTTCTGTTTCATCCCCTAAAAGAAATATATCCACCATGGTC
GGGGTAAAGCGTCGAGTAGACGCCGGTGACGAGCGCAATGGAAAACGGAC
CAAGACGAAGACGCCGGTGTCCGTGCCCGCAAAGAAGGCCAAGTCGTCTG
CGGCTCCCGTGAAGGCATCCAAGTCTGTGTCGAAGAAGGGCGACAAGGGT
GGAAAGAAGGATAAGAAGACTCCTAGCAAGAAGAAGGCGCAGAAGGAGGA
ATCTGAATCTGAGGATGAGGACGATGAGGATGACTTTGATCTGGATGATG
TTGATGACTCGGAGATTGATGCTCTGGATGATGAGGATGACGAGGAGGAT
GTTGCTATGGATGATGTTGAGGAGGTCGAGGAGAAGGAAGATACTGGGAA
GAAGCCCAAGTCTGCGGATGCGGATGCTCAGCAAAGTATGATTGATTTAT
TGATTGGTTTTTCCCTCGGTGAAAAGTCTGGTACTAATGTGTTGCTTTTT
ATTATTTAGATAAGTCTACGTCGCGCGAATCGCATGCGAAGCAAAAGGCC
CTCCTGCAAGAGCGCAGGGCCGCCAGACCCAACGCTGATATGATCGGTCG
CTCGAAGAAGCTGTGGGAGCAGCTGCGTCGCAAGTCCCATGTTCCGCTCG
AGGAGCGGAAGAAGCTCATCAAGGAGCTTTTTGAAATCATTACTGGACGT
GTGAAGGACTTCGTTTTCAAGCATGACTCGGTCCGTGTCATCCAGACGGC
CCTCAAATACGCCAACATGGAGCAACGGAAGATGATCGCCACGGAACTGA
AGGGCAGCTACAATGAGCTTGCGCAGAGCCGTTATGCCAAGTTCCTGGTC
GGAAAGTTGATTGTTCACGGTGATGCTGAGGTTCGTGATTTGATCGTGCC
CGAGTTCTACGGACATGTCAAGAGACTCATCAGACACCCCGAGGGGTCTT
GGATTCTCGACGACATCTACCGCACGGTTGCGACGAAGGAACAGAAGGCG
AACCTCCTCCGTGAGTGGTATGGCCCGGAATTCGTCATCTTTAGGGATGA
CAAGAACGGCCCTCCCAGTGCAGACCTCTCTAAGATCCTTGAGGCGCACC
CGGAGAAGAGGGGCCCCATCATGCACTACCTCTGGGAGCTTGTCAACCAG
CTGGTGCAGAAGCGCAACTCTGGTTTCACCATCCTGCACGACGCCATGCT
GCAGTACTACCTTAACACTAAGCCGGGCAGCTCCGAGGCTAATGAGTTCG
TTGAGCTGCTGAAGGGTGATGAAGAGGGAGACCTGGTGAAGAACTTGGCT
TTTACCAAGTCTGGTGCACGGGTGATGTCGTTGAGTCTGGCGTACTCCAA
CGCTAAGGACCGCAAGCTCCTTACCCGCTTCTACAGAGATACCATCAAGA
TGATGGCCGGCGATCTCCACGGACATCTGGTTCTGTTGACGGCATACGAA
GTTATTGACGATACCAAGCTTACCTCGAAGTTGATCTTCCCCGAACTTCT
GAACCAGGGAATGGACGCCGAGGCACGGAACGAAGAACTGCTTTTCCAAG
TGAACGACTTGACAGCGCGTATCCCCATCCTGTATCCGTTTGTCGGCGAC
CGGGTCAAGTGGCTTCTGCCTGACGGCGACCATGAGTTGCTGAAGGAGAT
TCGTGACATTCGTAAGGAGACCTCCAAGAAGGATCCCGAGCTTCGACGAC
AGGAGCTGGTCAAGGCTGCGTCGGCGAGCGTGCTCGAGCTCATTTCCGCA
CGTGCCGACTCTCTCCTCGAGACGAGCTTTGGATGCCAATTCATCTCCGA
GGTGTTGTTCGAAGCCGATGGAGACAAGAGCGCCGCATTGGCCGCCGTGG
CTGAGGCCGCCAAATCCAGAGCCGACACCAAGGACTCTCCGTTCGTGGGT
CGGTTGCTCAAGTCACTGGTTCAGGGTGGACGGTTTAACGCTGCCGAGAA
GAAGGTCGAGAAGGTGCAGCCTCCGCTCAACTTCCACGGTCTCCTTTACG
AGCAGATCCAAGAAGAGACAATGTCGTGGGCCACGGGATCCAATGTGTTT
GTCGTGGTGGCTCTTGCGGAGTCGGACGACTTCGAGAAGAAGGCCGAGTT
GCTGAAGACGCTGAAGAAGAACAAGAAGGCGCTGGAGAAGGCGTCGTCGG
AGACTAGCAAGGATGGCAAGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAG
CTGCTGCTGGAGAAGATCCGGTAGAGATTTTCTCTGTGTCAGTCCCTTAG
CAGGGGGGCAATGTAATATTGGCTGGGATTTTTTTTTTTCTTTCTTCTTT
TACAAACGCATTTCATTTGCTCATCGAGGTGTTCGTTGGATTCTTATTAT
ATTGATTCCTTTTTCTTATAGGTGATATCTCCATCTGTACAGGGTCTGTG
ATAGACATGGGACCACAACGAGTCAGAAAAAAGCATTTTGATATTTATTT
AGCATGATCCAAAACGTAGTAAAGTATTGTATTTGTCCTACGCTTCCCCA
TGATTAACTATAGTATAGA back to topCoding sequence (CDS) from alignment at ch8:2248857..2251475+ >KJC3_011994-T1 ID=KJC3_011994-T1|Name=KJC3_011994-T1|organism=Aspergillus niger KJC3|type=CDS|length=4212bp|location=Sequence derived from alignment at ch8:2248857..2251475+ (Aspergillus niger KJC3)
ATGGTCGGGGTAAAGCGTCGAGTAGACGCCGGTGACGAGCGCAATGGAAA
ACGGACCAAGACGAAGACGCCGGTGTCCGTGCCCGCAAAGAAGGCCAAGT
CGTCTGCGGCTCCCGTGAAGGCATCCAAGTCTGTGTCGAAGAAGGGCGAC
AAGGGTGGAAAGAAGGATAAGAAGACTCCTAGCAAGAAGAAGGCGCAGAA
GGAGGAATCTGAATCTGAGGATGAGGACGATGAGGATGACTTTGATCTGG
ATGATGTTGATGACTCGGAGATTGATGCTCTGGATGATGAGGATGACGAG
GAGGATGTTGCTATGGATGATGTTGAGGAGGTCGAGGAGAAGGAAGATAC
TGGGAAGAAGCCCAAGTCTGCGGATGCGGATGCTCAGCAAAATAAGTCTA
CGTCGCGCGAATCGCATGCGAAGCAAAAGGCCCTCCTGCAAGAGCGCAGG
GCCGCCAGACCCAACGCTGATATGATCGGTCGCTCGAAGAAGCTGTGGGA
GCAGCTGCGTCGCAAGTCCCATGTTCCGCTCGAGGAGCGGAAGAAGCTCA
TCAAGGAGCTTTTTGAAATCATTACTGGACGTGTGAAGGACTTCGTTTTC
AAGCATGACTCGGTCCGTGTCATCCAGACGGCCCTCAAATACGCCAACAT
GGAGCAACGGAAGATGATCGCCACGGAACTGAAGGGCAGCTACAATGAGC
TTGCGCAGAGCCGTTATGCCAAGTTCCTGGTCGGAAAGTTGATTGTTCAC
GGTGATGCTGAGGTTCGTGATTTGATCGTGCCCGAGTTCTACGGACATGT
CAAGAGACTCATCAGACACCCCGAGGGGTCTTGGATTCTCGACGACATCT
ACCGCACGGTTGCGACGAAGGAACAGAAGGCGAACCTCCTCCGTGAGTGG
TATGGCCCGGAATTCGTCATCTTTAGGGATGACAAGAACGGCCCTCCCAG
TGCAGACCTCTCTAAGATCCTTGAGGCGCACCCGGAGAAGAGGGGCCCCA
TCATGCACTACCTCTGGGAGCTTGTCAACCAGCTGGTGCAGAAGCGCAAC
TCTGGTTTCACCATCCTGCACGACGCCATGCTGCAGTACTACCTTAACAC
TAAGCCGGGCAGCTCCGAGGCTAATGAGTTCGTTGAGCTGCTGAAGGGTG
ATGAAGAGGGAGACCTGGTGAAGAACTTGGCTTTTACCAAGTCTGGTGCA
CGGGTGATGTCGTTGAGTCTGGCGTACTCCAACGCTAAGGACCGCAAGCT
CCTTACCCGCTTCTACAGAGATACCATCAAGATGATGGCCGGCGATCTCC
ACGGACATCTGGTTCTGTTGACGGCATACGAAGTTATTGACGATACCAAG
CTTACCTCGAAGTTGATCTTCCCCGAACTTCTGAACCAGGGAATGGACGC
CGAGGCACGGAACGAAGAACTGCTTTTCCAAGTGAACGACTTGACAGCGC
GTATCCCCATCCTGTATCCGTTTGTCGGCGACCGGGTCAAGTGGCTTCTG
CCTGACGGCGACCATGAGTTGCTGAAGGAGATTCGTGACATTCGTAAGGA
GACCTCCAAGAAGGATCCCGAGCTTCGACGACAGGAGCTGGTCAAGGCTG
CGTCGGCGAGCGTGCTCGAGCTCATTTCCGCACGTGCCGACTCTCTCCTC
GAGACGAGCTTTGGATGCCAATTCATCTCCGAGGTGTTGTTCGAAGCCGA
TGGAGACAAGAGCGCCGCATTGGCCGCCGTGGCTGAGGCCGCCAAATCCA
GAGCCGACACCAAGGACTCTCCGTTCGTGGGTCGGTTGCTCAAGTCACTG
GTTCAGGGTGGACGGTTTAACGCTGCCGAGAAGAAGGTCGAGAAGGTGCA
GCCTCCGCTCAACTTCCACGGTCTCCTTTACGAGCAGATCCAAGAAGAGA
CAATGTCGTGGGCCACGGGATCCAATGTGTTTGTCGTGGTGGCTCTTGCG
GAGTCGGACGACTTCGAGAAGAAGGCCGAGTTGCTGAAGACGCTGAAGAA
GAACAAGAAGGCGCTGGAGAAGGCGTCGTCGGAGACTAGCAAGGATGGCA
AGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAGCTGCTGCTGGAGAAGATC
CGGTAGATGGTCGGGGTAAAGCGTCGAGTAGACGCCGGTGACGAGCGCAA
TGGAAAACGGACCAAGACGAAGACGCCGGTGTCCGTGCCCGCAAAGAAGG
CCAAGTCGTCTGCGGCTCCCGTGAAGGCATCCAAGTCTGTGTCGAAGAAG
GGCGACAAGGGTGGAAAGAAGGATAAGAAGACTCCTAGCAAGAAGAAGGC
GCAGAAGGAGGAATCTGAATCTGAGGATGAGGACGATGAGGATGACTTTG
ATCTGGATGATGTTGATGACTCGGAGATTGATGCTCTGGATGATGAGGAT
GACGAGGAGGATGTTGCTATGGATGATGTTGAGGAGGTCGAGGAGAAGGA
AGATACTGGGAAGAAGCCCAAGTCTGCGGATGCGGATGCTCAGCAAAATA
AGTCTACGTCGCGCGAATCGCATGCGAAGCAAAAGGCCCTCCTGCAAGAG
CGCAGGGCCGCCAGACCCAACGCTGATATGATCGGTCGCTCGAAGAAGCT
GTGGGAGCAGCTGCGTCGCAAGTCCCATGTTCCGCTCGAGGAGCGGAAGA
AGCTCATCAAGGAGCTTTTTGAAATCATTACTGGACGTGTGAAGGACTTC
GTTTTCAAGCATGACTCGGTCCGTGTCATCCAGACGGCCCTCAAATACGC
CAACATGGAGCAACGGAAGATGATCGCCACGGAACTGAAGGGCAGCTACA
ATGAGCTTGCGCAGAGCCGTTATGCCAAGTTCCTGGTCGGAAAGTTGATT
GTTCACGGTGATGCTGAGGTTCGTGATTTGATCGTGCCCGAGTTCTACGG
ACATGTCAAGAGACTCATCAGACACCCCGAGGGGTCTTGGATTCTCGACG
ACATCTACCGCACGGTTGCGACGAAGGAACAGAAGGCGAACCTCCTCCGT
GAGTGGTATGGCCCGGAATTCGTCATCTTTAGGGATGACAAGAACGGCCC
TCCCAGTGCAGACCTCTCTAAGATCCTTGAGGCGCACCCGGAGAAGAGGG
GCCCCATCATGCACTACCTCTGGGAGCTTGTCAACCAGCTGGTGCAGAAG
CGCAACTCTGGTTTCACCATCCTGCACGACGCCATGCTGCAGTACTACCT
TAACACTAAGCCGGGCAGCTCCGAGGCTAATGAGTTCGTTGAGCTGCTGA
AGGGTGATGAAGAGGGAGACCTGGTGAAGAACTTGGCTTTTACCAAGTCT
GGTGCACGGGTGATGTCGTTGAGTCTGGCGTACTCCAACGCTAAGGACCG
CAAGCTCCTTACCCGCTTCTACAGAGATACCATCAAGATGATGGCCGGCG
ATCTCCACGGACATCTGGTTCTGTTGACGGCATACGAAGTTATTGACGAT
ACCAAGCTTACCTCGAAGTTGATCTTCCCCGAACTTCTGAACCAGGGAAT
GGACGCCGAGGCACGGAACGAAGAACTGCTTTTCCAAGTGAACGACTTGA
CAGCGCGTATCCCCATCCTGTATCCGTTTGTCGGCGACCGGGTCAAGTGG
CTTCTGCCTGACGGCGACCATGAGTTGCTGAAGGAGATTCGTGACATTCG
TAAGGAGACCTCCAAGAAGGATCCCGAGCTTCGACGACAGGAGCTGGTCA
AGGCTGCGTCGGCGAGCGTGCTCGAGCTCATTTCCGCACGTGCCGACTCT
CTCCTCGAGACGAGCTTTGGATGCCAATTCATCTCCGAGGTGTTGTTCGA
AGCCGATGGAGACAAGAGCGCCGCATTGGCCGCCGTGGCTGAGGCCGCCA
AATCCAGAGCCGACACCAAGGACTCTCCGTTCGTGGGTCGGTTGCTCAAG
TCACTGGTTCAGGGTGGACGGTTTAACGCTGCCGAGAAGAAGGTCGAGAA
GGTGCAGCCTCCGCTCAACTTCCACGGTCTCCTTTACGAGCAGATCCAAG
AAGAGACAATGTCGTGGGCCACGGGATCCAATGTGTTTGTCGTGGTGGCT
CTTGCGGAGTCGGACGACTTCGAGAAGAAGGCCGAGTTGCTGAAGACGCT
GAAGAAGAACAAGAAGGCGCTGGAGAAGGCGTCGTCGGAGACTAGCAAGG
ATGGCAAGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAGCTGCTGCTGGAG
AAGATCCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011994-T1.utr5p1 | KJC3_011994-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR033133 |
| DBxref | InterPro:IPR012959 |
| DBxref | InterPro:IPR001313 |
| DBxref | PFAM:PF08144 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2248857..2251475 + |
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